RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 HOOK3Q86VS8 718 aa17.78■□□□□ 0.44
PPFIA3-207ENST00000602716 CDKL3Q8IVW4 592 aaPredicted RBP17.78■□□□□ 0.44
PPFIA3-207ENST00000602716 OR52K2Q8NGK3 314 aa17.78■□□□□ 0.44
PPFIA3-207ENST00000602716 FBXO25Q8TCJ0 367 aa17.78■□□□□ 0.44
PPFIA3-207ENST00000602716 SLC39A8Q9C0K1 460 aa17.78■□□□□ 0.44
PPFIA3-207ENST00000602716 PCDH9Q9HC56 1237 aa17.78■□□□□ 0.44
PPFIA3-207ENST00000602716 PPARGC1AQ9UBK2 798 aaKnown RBP17.78■□□□□ 0.44
PPFIA3-207ENST00000602716 F5H5T6 163 aa17.77■□□□□ 0.44
PPFIA3-207ENST00000602716 LEFTY2O00292 366 aa17.77■□□□□ 0.44
PPFIA3-207ENST00000602716 SHBGP04278 402 aa17.77■□□□□ 0.44
PPFIA3-207ENST00000602716 POU2F2P09086 479 aa17.77■□□□□ 0.44
PPFIA3-207ENST00000602716 RHOQP17081 205 aa17.77■□□□□ 0.44
PPFIA3-207ENST00000602716 HTR7P34969 479 aa17.77■□□□□ 0.44
PPFIA3-207ENST00000602716 AP1B1Q10567 949 aa17.77■□□□□ 0.44
PPFIA3-207ENST00000602716 GPS1Q13098 491 aa17.77■□□□□ 0.44
PPFIA3-207ENST00000602716 XRCC4Q13426 336 aa17.77■□□□□ 0.44
PPFIA3-207ENST00000602716 P3H1Q32P28 736 aa17.77■□□□□ 0.44
PPFIA3-207ENST00000602716 AFMIDQ63HM1 303 aa17.77■□□□□ 0.44
PPFIA3-207ENST00000602716 SYDE1Q6ZW31 735 aaPredicted RBP17.77■□□□□ 0.44
PPFIA3-207ENST00000602716 BBS7Q8IWZ6 715 aa17.77■□□□□ 0.44
PPFIA3-207ENST00000602716 CMTM8Q8IZV2 173 aa17.77■□□□□ 0.44
PPFIA3-207ENST00000602716 CCNYQ8ND76 341 aa17.77■□□□□ 0.44
PPFIA3-207ENST00000602716 CCDC110Q8TBZ0 833 aa17.77■□□□□ 0.44
PPFIA3-207ENST00000602716 TFB1MQ8WVM0 346 aaKnown RBP17.77■□□□□ 0.44
PPFIA3-207ENST00000602716 ZNF419Q96HQ0 510 aaPredicted RBP17.77■□□□□ 0.44
PPFIA3-207ENST00000602716 NSUN3Q9H649 340 aaKnown RBP17.77■□□□□ 0.44
PPFIA3-207ENST00000602716 TASP1Q9H6P5 420 aa17.77■□□□□ 0.44
PPFIA3-207ENST00000602716 CATSPERBQ9H7T0 1116 aa17.77■□□□□ 0.44
PPFIA3-207ENST00000602716 CNOT10Q9H9A5 744 aaKnown RBP17.77■□□□□ 0.44
PPFIA3-207ENST00000602716 SFXN1Q9H9B4 322 aa17.77■□□□□ 0.44
PPFIA3-207ENST00000602716 TMEM248Q9NWD8 314 aa17.77■□□□□ 0.44
PPFIA3-207ENST00000602716 ZFP37Q9Y6Q3 630 aaPredicted RBP17.77■□□□□ 0.44
PPFIA3-207ENST00000602716 C5orf60A6NFR6 353 aa17.77■□□□□ 0.43
PPFIA3-207ENST00000602716 F5H423 210 aaPredicted RBP17.77■□□□□ 0.43
PPFIA3-207ENST00000602716 KCNK1O00180 336 aa17.77■□□□□ 0.43
PPFIA3-207ENST00000602716 DFFAO00273 331 aa17.77■□□□□ 0.43
PPFIA3-207ENST00000602716 ADCY8P40145 1251 aa17.77■□□□□ 0.43
PPFIA3-207ENST00000602716 FAXCQ5TGI0 409 aa17.77■□□□□ 0.43
PPFIA3-207ENST00000602716 CCDC89Q8N998 374 aa17.77■□□□□ 0.43
PPFIA3-207ENST00000602716 SH3RF2Q8TEC5 729 aa17.77■□□□□ 0.43
PPFIA3-207ENST00000602716 USP13Q92995 863 aaPredicted RBP17.77■□□□□ 0.43
PPFIA3-207ENST00000602716 RTP4Q96DX8 246 aa17.77■□□□□ 0.43
PPFIA3-207ENST00000602716 PWWP2AQ96N64 755 aa17.77■□□□□ 0.43
PPFIA3-207ENST00000602716 ADAM7Q9H2U9 754 aa17.77■□□□□ 0.43
PPFIA3-207ENST00000602716 PRDM16Q9HAZ2 1276 aa17.77■□□□□ 0.43
PPFIA3-207ENST00000602716 PIDD1Q9HB75 910 aa17.77■□□□□ 0.43
PPFIA3-207ENST00000602716 WASH4PA8MWX3 477 aa17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 SERPINB6P35237 376 aa17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 GARSP41250 739 aaKnown RBP17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 PPARDQ03181 441 aa17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 LMNB2Q03252 620 aa17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 GAD2Q05329 585 aa17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 PDK1Q15118 436 aa17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 SYCP2LQ5T4T6 812 aa17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 ADGRF1Q5T601 910 aa17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 IZUMO3Q5VZ72 239 aa17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 DENND2CQ68D51 928 aa17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 CNPY4Q8N129 248 aa17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 ST13P5Q8NFI4 369 aaPredicted RBP17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 SNF8Q96H20 258 aa17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 SEPT10Q9P0V9 454 aa17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 STOML2Q9UJZ1 356 aa17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 ARHGAP26Q9UNA1 814 aa17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 GFRA2O00451 464 aa17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 PAPLNO95428 1278 aa17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 ITGA8P53708 1063 aa17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 WASHC5Q12768 1159 aa17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 IFT88Q13099 833 aa17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 C5orf22Q49AR2 442 aa17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 ANKRD22Q5VYY1 191 aa17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 SYCE2Q6PIF2 218 aa17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 HTR3CQ8WXA8 447 aa17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 BHMTQ93088 406 aa17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 HDAC11Q96DB2 347 aa17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 HMCESQ96FZ2 354 aa17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 PGM2Q96G03 612 aa17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 CDCA3Q99618 268 aaPredicted RBP17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 DPP7Q9UHL4 492 aa17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 MRPS23Q9Y3D9 190 aaKnown RBP17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 CAPN7Q9Y6W3 813 aa17.76■□□□□ 0.43
PPFIA3-207ENST00000602716 C2orf16Q68DN1 1984 aa17.75■□□□□ 0.43
PPFIA3-207ENST00000602716 XIRP2A4UGR9 3374 aa17.75■□□□□ 0.43
PPFIA3-207ENST00000602716 CLUHO75153 1309 aa17.75■□□□□ 0.43
PPFIA3-207ENST00000602716 NYNRINQ9P2P1 1898 aaKnown RBP17.75■□□□□ 0.43
PPFIA3-207ENST00000602716 VGLL3A8MV65 326 aa17.75■□□□□ 0.43
PPFIA3-207ENST00000602716 RNF103O00237 685 aa17.75■□□□□ 0.43
PPFIA3-207ENST00000602716 PPP1R12AO14974 1030 aaPredicted RBP17.75■□□□□ 0.43
PPFIA3-207ENST00000602716 AVPR1AP37288 418 aa17.75■□□□□ 0.43
PPFIA3-207ENST00000602716 DLX2Q07687 328 aaPredicted RBP17.75■□□□□ 0.43
PPFIA3-207ENST00000602716 PPIDQ08752 370 aaKnown RBP17.75■□□□□ 0.43
PPFIA3-207ENST00000602716 ZBTB17Q13105 803 aa17.75■□□□□ 0.43
PPFIA3-207ENST00000602716 GRIN2CQ14957 1233 aa17.75■□□□□ 0.43
PPFIA3-207ENST00000602716 QPCTQ16769 361 aa17.75■□□□□ 0.43
PPFIA3-207ENST00000602716 HEATR6Q6AI08 1181 aaKnown RBP17.75■□□□□ 0.43
PPFIA3-207ENST00000602716 AZIN2Q96A70 460 aa17.75■□□□□ 0.43
PPFIA3-207ENST00000602716 CENPTQ96BT3 561 aa17.75■□□□□ 0.43
PPFIA3-207ENST00000602716 COLQQ9Y215 455 aaPredicted RBP17.75■□□□□ 0.43
PPFIA3-207ENST00000602716 TCRBV7S3A2A0A539 114 aa17.74■□□□□ 0.43
PPFIA3-207ENST00000602716 HACD1B0YJ81 288 aa17.74■□□□□ 0.43
PPFIA3-207ENST00000602716 FGF19O95750 216 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms