RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 E5RJQ4 531 aa18.36■□□□□ 0.53
SHKBP1-227ENST00000602011 ENC1O14682 589 aa18.36■□□□□ 0.53
SHKBP1-227ENST00000602011 THAP12O43422 761 aa18.36■□□□□ 0.53
SHKBP1-227ENST00000602011 RNGTTO60942 597 aaKnown RBP18.36■□□□□ 0.53
SHKBP1-227ENST00000602011 HSF2BPO75031 334 aa18.36■□□□□ 0.53
SHKBP1-227ENST00000602011 CTSOP43234 321 aaPredicted RBP18.36■□□□□ 0.53
SHKBP1-227ENST00000602011 PSMD8P48556 350 aa18.36■□□□□ 0.53
SHKBP1-227ENST00000602011 CLDN6P56747 220 aa18.36■□□□□ 0.53
SHKBP1-227ENST00000602011 KCNJ12Q14500 433 aa18.36■□□□□ 0.53
SHKBP1-227ENST00000602011 NAPEPLDQ6IQ20 393 aa18.36■□□□□ 0.53
SHKBP1-227ENST00000602011 MMS22LQ6ZRQ5 1243 aa18.36■□□□□ 0.53
SHKBP1-227ENST00000602011 APCDD1Q8J025 514 aa18.36■□□□□ 0.53
SHKBP1-227ENST00000602011 AADATQ8N5Z0 425 aa18.36■□□□□ 0.53
SHKBP1-227ENST00000602011 RNF34Q969K3 372 aa18.36■□□□□ 0.53
SHKBP1-227ENST00000602011 MYEOVQ96EZ4 313 aa18.36■□□□□ 0.53
SHKBP1-227ENST00000602011 RPL10LQ96L21 214 aaKnown RBP18.36■□□□□ 0.53
SHKBP1-227ENST00000602011 PRMT1Q99873 361 aaKnown RBP18.36■□□□□ 0.53
SHKBP1-227ENST00000602011 SLC25A13Q9UJS0 675 aa18.36■□□□□ 0.53
SHKBP1-227ENST00000602011 FARP1Q9Y4F1 1045 aaPredicted RBP18.36■□□□□ 0.53
SHKBP1-227ENST00000602011 MUC22E2RYF6 1773 aaPredicted RBP18.35■□□□□ 0.53
SHKBP1-227ENST00000602011 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.35■□□□□ 0.53
SHKBP1-227ENST00000602011 C1QTNF3-AMACRE9PGA6 284 aa18.35■□□□□ 0.53
SHKBP1-227ENST00000602011 ATP9BO43861 1147 aa18.35■□□□□ 0.53
SHKBP1-227ENST00000602011 CLDN11O75508 207 aa18.35■□□□□ 0.53
SHKBP1-227ENST00000602011 JUPP14923 745 aa18.35■□□□□ 0.53
SHKBP1-227ENST00000602011 NXPH1P58417 271 aa18.35■□□□□ 0.53
SHKBP1-227ENST00000602011 ZNF177Q13360 481 aaPredicted RBP18.35■□□□□ 0.53
SHKBP1-227ENST00000602011 PDCLQ13371 301 aa18.35■□□□□ 0.53
SHKBP1-227ENST00000602011 C6orf118Q5T5N4 469 aa18.35■□□□□ 0.53
SHKBP1-227ENST00000602011 NEK5Q6P3R8 708 aa18.35■□□□□ 0.53
SHKBP1-227ENST00000602011 CNDP2Q96KP4 475 aaKnown RBP18.35■□□□□ 0.53
SHKBP1-227ENST00000602011 SLC2A13Q96QE2 648 aa18.35■□□□□ 0.53
SHKBP1-227ENST00000602011 FAM204AQ9H8W3 233 aa18.35■□□□□ 0.53
SHKBP1-227ENST00000602011 EBF2Q9HAK2 575 aa18.35■□□□□ 0.53
SHKBP1-227ENST00000602011 XPO7Q9UIA9 1087 aaKnown RBP18.35■□□□□ 0.53
SHKBP1-227ENST00000602011 PCDHGC3Q9UN70 934 aa18.35■□□□□ 0.53
SHKBP1-227ENST00000602011 GTPBP10A4D1E9 387 aaKnown RBP18.34■□□□□ 0.53
SHKBP1-227ENST00000602011 MCF2LO15068 1137 aa18.34■□□□□ 0.53
SHKBP1-227ENST00000602011 RFPL3O75679 317 aa18.34■□□□□ 0.53
SHKBP1-227ENST00000602011 WNT1P04628 370 aa18.34■□□□□ 0.53
SHKBP1-227ENST00000602011 PDGFRAP16234 1089 aa18.34■□□□□ 0.53
SHKBP1-227ENST00000602011 BMP6P22004 513 aa18.34■□□□□ 0.53
SHKBP1-227ENST00000602011 PTK2Q05397 1052 aa18.34■□□□□ 0.53
SHKBP1-227ENST00000602011 STAT4Q14765 748 aa18.34■□□□□ 0.53
SHKBP1-227ENST00000602011 PRAMEF14Q5SWL7 426 aa18.34■□□□□ 0.53
SHKBP1-227ENST00000602011 DHRS13Q6UX07 377 aa18.34■□□□□ 0.53
SHKBP1-227ENST00000602011 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.34■□□□□ 0.53
SHKBP1-227ENST00000602011 GBP6Q6ZN66 633 aa18.34■□□□□ 0.53
SHKBP1-227ENST00000602011 TRIM69Q86WT6 500 aa18.34■□□□□ 0.53
SHKBP1-227ENST00000602011 ZDHHC17Q8IUH5 632 aa18.34■□□□□ 0.53
SHKBP1-227ENST00000602011 FRS2Q8WU20 508 aa18.34■□□□□ 0.53
SHKBP1-227ENST00000602011 NXPE2Q96DL1 559 aa18.34■□□□□ 0.53
SHKBP1-227ENST00000602011 PPP1R13BQ96KQ4 1090 aa18.34■□□□□ 0.53
SHKBP1-227ENST00000602011 CCDC114Q96M63 670 aa18.34■□□□□ 0.53
SHKBP1-227ENST00000602011 RPRD1AQ96P16 312 aaPredicted RBP18.34■□□□□ 0.53
SHKBP1-227ENST00000602011 DDIT4Q9NX09 232 aa18.34■□□□□ 0.53
SHKBP1-227ENST00000602011 PPM1HQ9ULR3 514 aa18.34■□□□□ 0.53
SHKBP1-227ENST00000602011 CTNND2Q9UQB3 1225 aa18.34■□□□□ 0.53
SHKBP1-227ENST00000602011 PAXBP1Q9Y5B6 917 aa18.34■□□□□ 0.53
SHKBP1-227ENST00000602011 PRAMEF26H0Y7S4 382 aa18.33■□□□□ 0.52
SHKBP1-227ENST00000602011 CBX4O00257 560 aa18.33■□□□□ 0.52
SHKBP1-227ENST00000602011 PLRG1O43660 514 aaKnown RBP18.33■□□□□ 0.52
SHKBP1-227ENST00000602011 CALCAP01258 141 aa18.33■□□□□ 0.52
SHKBP1-227ENST00000602011 EPHA8P29322 1005 aaPredicted RBP18.33■□□□□ 0.52
SHKBP1-227ENST00000602011 DRD3P35462 400 aa18.33■□□□□ 0.52
SHKBP1-227ENST00000602011 KRT83P78385 493 aa18.33■□□□□ 0.52
SHKBP1-227ENST00000602011 C5orf22Q49AR2 442 aa18.33■□□□□ 0.52
SHKBP1-227ENST00000602011 SETMARQ53H47 684 aaPredicted RBP18.33■□□□□ 0.52
SHKBP1-227ENST00000602011 FBXL22Q6P050 247 aa18.33■□□□□ 0.52
SHKBP1-227ENST00000602011 TRIM65Q6PJ69 517 aa18.33■□□□□ 0.52
SHKBP1-227ENST00000602011 C11orf57Q6ZUT1 292 aaPredicted RBP18.33■□□□□ 0.52
SHKBP1-227ENST00000602011 DEFB106AQ8N104 65 aa18.33■□□□□ 0.52
SHKBP1-227ENST00000602011 FAM174AQ8TBP5 190 aa18.33■□□□□ 0.52
SHKBP1-227ENST00000602011 TSC1Q92574 1164 aa18.33■□□□□ 0.52
SHKBP1-227ENST00000602011 DCBLD2Q96PD2 775 aa18.33■□□□□ 0.52
SHKBP1-227ENST00000602011 FEM1AQ9BSK4 669 aa18.33■□□□□ 0.52
SHKBP1-227ENST00000602011 NRSN2Q9GZP1 204 aa18.33■□□□□ 0.52
SHKBP1-227ENST00000602011 PREBQ9HCU5 417 aa18.33■□□□□ 0.52
SHKBP1-227ENST00000602011 APEX2Q9UBZ4 518 aa18.33■□□□□ 0.52
SHKBP1-227ENST00000602011 CYTH4Q9UIA0 394 aa18.33■□□□□ 0.52
SHKBP1-227ENST00000602011 TBC1D30Q9Y2I9 924 aa18.33■□□□□ 0.52
SHKBP1-227ENST00000602011 F9P00740 461 aa18.32■□□□□ 0.52
SHKBP1-227ENST00000602011 PRB1P04280 392 aa18.32■□□□□ 0.52
SHKBP1-227ENST00000602011 ZNF18P17022 549 aa18.32■□□□□ 0.52
SHKBP1-227ENST00000602011 CKMT2P17540 419 aa18.32■□□□□ 0.52
SHKBP1-227ENST00000602011 NOS2P35228 1153 aa18.32■□□□□ 0.52
SHKBP1-227ENST00000602011 CDH4P55283 916 aa18.32■□□□□ 0.52
SHKBP1-227ENST00000602011 BPIFB4P59827 614 aa18.32■□□□□ 0.52
SHKBP1-227ENST00000602011 AUHQ13825 339 aaKnown RBP18.32■□□□□ 0.52
SHKBP1-227ENST00000602011 SHBQ15464 509 aa18.32■□□□□ 0.52
SHKBP1-227ENST00000602011 ACCSLQ4AC99 568 aa18.32■□□□□ 0.52
SHKBP1-227ENST00000602011 CXorf57Q6NSI4 855 aaKnown RBP18.32■□□□□ 0.52
SHKBP1-227ENST00000602011 GATAD2AQ86YP4 633 aa18.32■□□□□ 0.52
SHKBP1-227ENST00000602011 C1orf131Q8NDD1 294 aaKnown RBP18.32■□□□□ 0.52
SHKBP1-227ENST00000602011 ZNF397Q8NF99 534 aaPredicted RBP18.32■□□□□ 0.52
SHKBP1-227ENST00000602011 ALG14Q96F25 216 aa18.32■□□□□ 0.52
SHKBP1-227ENST00000602011 ARHGAP20Q9P2F6 1191 aa18.32■□□□□ 0.52
SHKBP1-227ENST00000602011 RWDD2AQ9UIY3 292 aa18.32■□□□□ 0.52
SHKBP1-227ENST00000602011 KRT9P35527 623 aa18.31■□□□□ 0.52
SHKBP1-227ENST00000602011 USP8P40818 1118 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms