RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 SH3RF2Q8TEC5 729 aa18.42■□□□□ 0.54
VRK3-225ENST00000601912 TMA16Q96EY4 203 aaKnown RBP18.42■□□□□ 0.54
VRK3-225ENST00000601912 ETNK1Q9HBU6 452 aa18.42■□□□□ 0.54
VRK3-225ENST00000601912 TDP1Q9NUW8 608 aa18.42■□□□□ 0.54
VRK3-225ENST00000601912 E2F8A0AVK6 867 aa18.41■□□□□ 0.54
VRK3-225ENST00000601912 E7EVH7 732 aa18.41■□□□□ 0.54
VRK3-225ENST00000601912 CCNB1P14635 433 aa18.41■□□□□ 0.54
VRK3-225ENST00000601912 PMS2P54278 862 aa18.41■□□□□ 0.54
VRK3-225ENST00000601912 PARP6Q2NL67 630 aa18.41■□□□□ 0.54
VRK3-225ENST00000601912 TEX44Q53QW1 395 aa18.41■□□□□ 0.54
VRK3-225ENST00000601912 ITPRIPL1Q6GPH6 555 aa18.41■□□□□ 0.54
VRK3-225ENST00000601912 PPP1R21Q6ZMI0 780 aa18.41■□□□□ 0.54
VRK3-225ENST00000601912 ARHGAP36Q6ZRI8 547 aa18.41■□□□□ 0.54
VRK3-225ENST00000601912 FAM217AQ8IXS0 508 aa18.41■□□□□ 0.54
VRK3-225ENST00000601912 CPXM2Q8N436 756 aa18.41■□□□□ 0.54
VRK3-225ENST00000601912 EXOC4Q96A65 974 aa18.41■□□□□ 0.54
VRK3-225ENST00000601912 HMCESQ96FZ2 354 aa18.41■□□□□ 0.54
VRK3-225ENST00000601912 SMG9Q9H0W8 520 aaKnown RBP18.41■□□□□ 0.54
VRK3-225ENST00000601912 MAGEH1Q9H213 219 aa18.41■□□□□ 0.54
VRK3-225ENST00000601912 ZNF576Q9H609 170 aa18.41■□□□□ 0.54
VRK3-225ENST00000601912 ATG2AQ2TAZ0 1938 aa18.41■□□□□ 0.54
VRK3-225ENST00000601912 MYO9BQ13459 2157 aa18.41■□□□□ 0.54
VRK3-225ENST00000601912 SCAMP3O14828 347 aaKnown RBP18.41■□□□□ 0.54
VRK3-225ENST00000601912 NEBLO76041 1014 aa18.41■□□□□ 0.54
VRK3-225ENST00000601912 METTL18O95568 372 aa18.41■□□□□ 0.54
VRK3-225ENST00000601912 JCHAINP01591 159 aa18.41■□□□□ 0.54
VRK3-225ENST00000601912 KCNJ11Q14654 390 aa18.41■□□□□ 0.54
VRK3-225ENST00000601912 SPDYCQ5MJ68 293 aa18.41■□□□□ 0.54
VRK3-225ENST00000601912 TMEM184AQ6ZMB5 413 aa18.41■□□□□ 0.54
VRK3-225ENST00000601912 SETD3Q86TU7 594 aaPredicted RBP18.41■□□□□ 0.54
VRK3-225ENST00000601912 NSMCE1Q8WV22 266 aa18.41■□□□□ 0.54
VRK3-225ENST00000601912 UBLCP1Q8WVY7 318 aaPredicted RBP18.41■□□□□ 0.54
VRK3-225ENST00000601912 USP13Q92995 863 aaPredicted RBP18.41■□□□□ 0.54
VRK3-225ENST00000601912 CEP41Q9BYV8 373 aa18.41■□□□□ 0.54
VRK3-225ENST00000601912 FRMD8Q9BZ67 464 aaPredicted RBP18.41■□□□□ 0.54
VRK3-225ENST00000601912 TXLNGYQ9BZA5 131 aa18.41■□□□□ 0.54
VRK3-225ENST00000601912 SP110Q9HB58 689 aa18.41■□□□□ 0.54
VRK3-225ENST00000601912 IGSF9Q9P2J2 1179 aa18.41■□□□□ 0.54
VRK3-225ENST00000601912 TBL1XO60907 577 aa18.4■□□□□ 0.54
VRK3-225ENST00000601912 SASH3O75995 380 aa18.4■□□□□ 0.54
VRK3-225ENST00000601912 APRTP07741 180 aa18.4■□□□□ 0.54
VRK3-225ENST00000601912 CEBPBP17676 345 aa18.4■□□□□ 0.54
VRK3-225ENST00000601912 MAGEA6P43360 314 aa18.4■□□□□ 0.54
VRK3-225ENST00000601912 LMAN1P49257 510 aa18.4■□□□□ 0.54
VRK3-225ENST00000601912 ARL4CP56559 192 aa18.4■□□□□ 0.54
VRK3-225ENST00000601912 IFI35P80217 286 aaPredicted RBP18.4■□□□□ 0.54
VRK3-225ENST00000601912 GNA12Q03113 381 aa18.4■□□□□ 0.54
VRK3-225ENST00000601912 SEMA5AQ13591 1074 aa18.4■□□□□ 0.54
VRK3-225ENST00000601912 RARS2Q5T160 578 aaKnown RBP18.4■□□□□ 0.54
VRK3-225ENST00000601912 FAXCQ5TGI0 409 aa18.4■□□□□ 0.54
VRK3-225ENST00000601912 ANKRD22Q5VYY1 191 aa18.4■□□□□ 0.54
VRK3-225ENST00000601912 CENPUQ71F23 418 aa18.4■□□□□ 0.54
VRK3-225ENST00000601912 BBS7Q8IWZ6 715 aa18.4■□□□□ 0.54
VRK3-225ENST00000601912 EFHBQ8N7U6 833 aa18.4■□□□□ 0.54
VRK3-225ENST00000601912 TDRD5Q8NAT2 981 aaKnown RBP18.4■□□□□ 0.54
VRK3-225ENST00000601912 TSEN2Q8NCE0 465 aaKnown RBP18.4■□□□□ 0.54
VRK3-225ENST00000601912 ING5Q8WYH8 240 aa18.4■□□□□ 0.54
VRK3-225ENST00000601912 FATE1Q969F0 183 aa18.4■□□□□ 0.54
VRK3-225ENST00000601912 TEKT5Q96M29 485 aa18.4■□□□□ 0.54
VRK3-225ENST00000601912 AGAP3Q96P47 875 aa18.4■□□□□ 0.54
VRK3-225ENST00000601912 RBM15Q96T37 977 aaKnown RBP eCLIP18.4■□□□□ 0.54
VRK3-225ENST00000601912 HPCAL4Q9UM19 191 aa18.4■□□□□ 0.54
VRK3-225ENST00000601912 CCL26Q9Y258 94 aa18.4■□□□□ 0.54
VRK3-225ENST00000601912 NOTCH4Q99466 2003 aa18.39■□□□□ 0.54
VRK3-225ENST00000601912 LAMA3Q16787 3333 aa18.39■□□□□ 0.53
VRK3-225ENST00000601912 ILVBLA1L0T0 632 aa18.39■□□□□ 0.53
VRK3-225ENST00000601912 GOLGA8MH3BSY2 632 aa18.39■□□□□ 0.53
VRK3-225ENST00000601912 RHOCP08134 193 aa18.39■□□□□ 0.53
VRK3-225ENST00000601912 TPSB2P20231 275 aa18.39■□□□□ 0.53
VRK3-225ENST00000601912 HSD17B3P37058 310 aa18.39■□□□□ 0.53
VRK3-225ENST00000601912 ETFBP38117 255 aa18.39■□□□□ 0.53
VRK3-225ENST00000601912 RENBPP51606 427 aa18.39■□□□□ 0.53
VRK3-225ENST00000601912 SGSHP51688 502 aa18.39■□□□□ 0.53
VRK3-225ENST00000601912 SARNPP82979 210 aaKnown RBP18.39■□□□□ 0.53
VRK3-225ENST00000601912 HYAL1Q12794 435 aa18.39■□□□□ 0.53
VRK3-225ENST00000601912 ZBTB17Q13105 803 aa18.39■□□□□ 0.53
VRK3-225ENST00000601912 SERINC3Q13530 473 aa18.39■□□□□ 0.53
VRK3-225ENST00000601912 TPSAB1Q15661 275 aa18.39■□□□□ 0.53
VRK3-225ENST00000601912 HIF1AQ16665 826 aa18.39■□□□□ 0.53
VRK3-225ENST00000601912 MPPE1Q53F39 396 aa18.39■□□□□ 0.53
VRK3-225ENST00000601912 TCEAL5Q5H9L2 206 aa18.39■□□□□ 0.53
VRK3-225ENST00000601912 FAM182AQ5T1J6 154 aa18.39■□□□□ 0.53
VRK3-225ENST00000601912 CFAP58Q5T655 872 aa18.39■□□□□ 0.53
VRK3-225ENST00000601912 ALS2CLQ60I27 953 aa18.39■□□□□ 0.53
VRK3-225ENST00000601912 TRMT10CQ7L0Y3 403 aaKnown RBP18.39■□□□□ 0.53
VRK3-225ENST00000601912 CCDC117Q8IWD4 279 aaPredicted RBP18.39■□□□□ 0.53
VRK3-225ENST00000601912 PDIK1LQ8N165 341 aa18.39■□□□□ 0.53
VRK3-225ENST00000601912 PRO3102Q9H379 93 aa18.39■□□□□ 0.53
VRK3-225ENST00000601912 RSPH14Q9UHP6 348 aa18.39■□□□□ 0.53
VRK3-225ENST00000601912 TBC1D30Q9Y2I9 924 aa18.39■□□□□ 0.53
VRK3-225ENST00000601912 SHROOM3Q8TF72 1996 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 TCRBV7S3A2A0A539 114 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 H0Y626 953 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 GFRA2O00451 464 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 ZBTB24O43167 697 aaPredicted RBP18.38■□□□□ 0.53
VRK3-225ENST00000601912 CYBBP04839 570 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 RGS19P49795 217 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 CDK16Q00536 496 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 IL10RBQ08334 325 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 HNRNPDQ14103 355 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms