RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 RSPO4Q2I0M5 234 aaPredicted RBP9.03□□□□□ -0.96
SSBP4-208ENST00000600628 SPECC1LQ69YQ0 1117 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 DNAJC24Q6P3W2 148 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 SERPINA13PQ6UXR4 307 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 PRR23CQ6ZRP0 262 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 PHLDB2Q86SQ0 1253 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 SLC41A1Q8IVJ1 513 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 NIPA2Q8N8Q9 360 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 OR2T3Q8NH03 318 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 DNASE2BQ8WZ79 361 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 RNF34Q969K3 372 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 SELENOOQ9BVL4 669 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 SIK2Q9H0K1 926 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 PRDM16Q9HAZ2 1276 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 NDFIP2Q9NV92 336 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 TMEM248Q9NWD8 314 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 MPP6Q9NZW5 540 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 SUN2Q9UH99 717 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 PILRBQ9UKJ0 227 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 FZD10Q9ULW2 581 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 PLA2G4CQ9UP65 541 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.03□□□□□ -0.96
SSBP4-208ENST00000600628 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.03□□□□□ -0.96
SSBP4-208ENST00000600628 NCOR2Q9Y618 2525 aa9.02□□□□□ -0.96
SSBP4-208ENST00000600628 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.02□□□□□ -0.97
SSBP4-208ENST00000600628 A0A0D9SEW6 157 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 EDDM13A0A1B0GTR0 161 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 SSU72P8A0A1W2PR75 194 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 TTC34A8MYJ7 566 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 MAP3K13O43283 966 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 ATMINO43313 823 aaPredicted RBP9.02□□□□□ -0.97
SSBP4-208ENST00000600628 MFAP3LO75121 409 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 MT-CO1P00395 513 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 EPHX1P07099 455 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 RHOQP17081 205 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 FECHP22830 423 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 HTR7P34969 479 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 MPLP40238 635 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 PTGER3P43115 390 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 MAPKAPK2P49137 400 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 STK19P49842 368 aaPredicted RBP9.02□□□□□ -0.97
SSBP4-208ENST00000600628 LIMK1P53667 647 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 RPS14P62263 151 aaKnown RBP9.02□□□□□ -0.97
SSBP4-208ENST00000600628 CREB5Q02930 508 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 ZNF177Q13360 481 aaPredicted RBP9.02□□□□□ -0.97
SSBP4-208ENST00000600628 TRIM14Q14142 442 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 ACAP1Q15027 740 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 CDO1Q16878 200 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 ALKBH5Q6P6C2 394 aaKnown RBP9.02□□□□□ -0.97
SSBP4-208ENST00000600628 SLC36A4Q6YBV0 504 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 TMC6Q7Z403 805 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 GAS2L3Q86XJ1 694 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 PSTKQ8IV42 348 aaKnown RBP9.02□□□□□ -0.97
SSBP4-208ENST00000600628 SH2D3CQ8N5H7 860 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 ZNF366Q8N895 744 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 DCAF4L2Q8NA75 395 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 CADM4Q8NFZ8 388 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 OR8K1Q8NGG5 319 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 FAM71BQ8TC56 605 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 SIPA1Q96FS4 1042 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 SPACA7Q96KW9 195 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 PEBP4Q96S96 227 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 PPP1R9BQ96SB3 815 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 ORAI3Q9BRQ5 295 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 ZYG11BQ9C0D3 744 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 KLC2Q9H0B6 622 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 PCED1AQ9H1Q7 454 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 MTG2Q9H4K7 406 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 VPS45Q9NRW7 570 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 EVLQ9UI08 416 aaPredicted RBP9.02□□□□□ -0.97
SSBP4-208ENST00000600628 VPS51Q9UID3 782 aa9.02□□□□□ -0.97
SSBP4-208ENST00000600628 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.01□□□□□ -0.97
SSBP4-208ENST00000600628 EIF3CLB5ME19 914 aaKnown RBP9.01□□□□□ -0.97
SSBP4-208ENST00000600628 MCF2LO15068 1137 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 CBFA2T2O43439 604 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 SYNCRIPO60506 623 aaKnown RBP9.01□□□□□ -0.97
SSBP4-208ENST00000600628 SIN3BO75182 1162 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 LRCH4O75427 683 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 MOCS3O95396 460 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 TPM3P06753 285 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 SRCP12931 536 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 CD6P30203 668 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 PCK1P35558 622 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 HCAR3P49019 387 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 TCEAL1Q15170 157 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 SF3A2Q15428 464 aaKnown RBP9.01□□□□□ -0.97
SSBP4-208ENST00000600628 CCDC6Q16204 474 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 SLC18A3Q16572 532 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 ARL13BQ3SXY8 428 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 FNDC3BQ53EP0 1204 aaKnown RBP9.01□□□□□ -0.97
SSBP4-208ENST00000600628 RNF219Q5W0B1 726 aaPredicted RBP9.01□□□□□ -0.97
SSBP4-208ENST00000600628 AFMIDQ63HM1 303 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 LRRC31Q6UY01 552 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 USP30Q70CQ3 517 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 LPCAT2Q7L5N7 544 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 ERMP1Q7Z2K6 904 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 SLFN11Q7Z7L1 901 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 SYT12Q8IV01 421 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 PLPP6Q8IY26 295 aa9.01□□□□□ -0.97
SSBP4-208ENST00000600628 UMODL1-AS1Q8N2C9 162 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms