RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 ADAMTS9Q9P2N4 1935 aa23.21■■□□□ 1.31
CCDC9-204ENST00000599398 SIGLEC16A6NMB1 481 aa23.21■■□□□ 1.31
CCDC9-204ENST00000599398 ACSL1P33121 698 aa23.21■■□□□ 1.31
CCDC9-204ENST00000599398 ACCSLQ4AC99 568 aa23.21■■□□□ 1.31
CCDC9-204ENST00000599398 DCAF12L1Q5VU92 463 aa23.21■■□□□ 1.31
CCDC9-204ENST00000599398 MMAAQ8IVH4 418 aaKnown RBP23.21■■□□□ 1.31
CCDC9-204ENST00000599398 MCOLN2Q8IZK6 566 aa23.21■■□□□ 1.31
CCDC9-204ENST00000599398 STK40Q8N2I9 435 aa23.21■■□□□ 1.31
CCDC9-204ENST00000599398 BTBD1Q9H0C5 482 aa23.21■■□□□ 1.31
CCDC9-204ENST00000599398 MIR1-1HGQ9H1L0 117 aa23.21■■□□□ 1.31
CCDC9-204ENST00000599398 HAUS4Q9H6D7 363 aa23.21■■□□□ 1.31
CCDC9-204ENST00000599398 FSCN3Q9NQT6 498 aa23.21■■□□□ 1.31
CCDC9-204ENST00000599398 TAS2R14Q9NYV8 317 aa23.21■■□□□ 1.31
CCDC9-204ENST00000599398 SUSD2Q9UGT4 822 aa23.21■■□□□ 1.31
CCDC9-204ENST00000599398 SLC6A14Q9UN76 642 aa23.21■■□□□ 1.31
CCDC9-204ENST00000599398 NCKAP1Q9Y2A7 1128 aa23.21■■□□□ 1.31
CCDC9-204ENST00000599398 IGLV3-10A0A075B6K4 115 aa23.2■■□□□ 1.3
CCDC9-204ENST00000599398 SERPINF2P08697 491 aa23.2■■□□□ 1.3
CCDC9-204ENST00000599398 VAV1P15498 845 aa23.2■■□□□ 1.3
CCDC9-204ENST00000599398 GNSP15586 552 aa23.2■■□□□ 1.3
CCDC9-204ENST00000599398 OR1E1P30953 314 aa23.2■■□□□ 1.3
CCDC9-204ENST00000599398 ADRA1BP35368 520 aa23.2■■□□□ 1.3
CCDC9-204ENST00000599398 MAPK8P45983 427 aa23.2■■□□□ 1.3
CCDC9-204ENST00000599398 UBASH3AP57075 661 aa23.2■■□□□ 1.3
CCDC9-204ENST00000599398 KRT83P78385 493 aa23.2■■□□□ 1.3
CCDC9-204ENST00000599398 GFPT1Q06210 699 aaPredicted RBP23.2■■□□□ 1.3
CCDC9-204ENST00000599398 C6orf118Q5T5N4 469 aa23.2■■□□□ 1.3
CCDC9-204ENST00000599398 DCUN1D2Q6PH85 259 aa23.2■■□□□ 1.3
CCDC9-204ENST00000599398 SETD3Q86TU7 594 aaPredicted RBP23.2■■□□□ 1.3
CCDC9-204ENST00000599398 SNX19Q92543 992 aa23.2■■□□□ 1.3
CCDC9-204ENST00000599398 PTPRN2Q92932 1015 aa23.2■■□□□ 1.3
CCDC9-204ENST00000599398 MCEEQ96PE7 176 aa23.2■■□□□ 1.3
CCDC9-204ENST00000599398 SYT11Q9BT88 431 aa23.2■■□□□ 1.3
CCDC9-204ENST00000599398 ZYG11BQ9C0D3 744 aa23.2■■□□□ 1.3
CCDC9-204ENST00000599398 PABPC3Q9H361 631 aaKnown RBP23.2■■□□□ 1.3
CCDC9-204ENST00000599398 FBXL12Q9NXK8 326 aa23.2■■□□□ 1.3
CCDC9-204ENST00000599398 SCML1Q9UN30 329 aa23.2■■□□□ 1.3
CCDC9-204ENST00000599398 OR51B4Q9Y5P0 310 aa23.2■■□□□ 1.3
CCDC9-204ENST00000599398 MED19A0JLT2 244 aaPredicted RBP23.19■■□□□ 1.3
CCDC9-204ENST00000599398 METTL12A8MUP2 240 aa23.19■■□□□ 1.3
CCDC9-204ENST00000599398 MID1O15344 667 aa23.19■■□□□ 1.3
CCDC9-204ENST00000599398 C7P10643 843 aa23.19■■□□□ 1.3
CCDC9-204ENST00000599398 ENGP17813 658 aa23.19■■□□□ 1.3
CCDC9-204ENST00000599398 RRM1P23921 792 aa23.19■■□□□ 1.3
CCDC9-204ENST00000599398 PSMD8P48556 350 aa23.19■■□□□ 1.3
CCDC9-204ENST00000599398 ATXN3P54252 364 aaPredicted RBP23.19■■□□□ 1.3
CCDC9-204ENST00000599398 HDAC4P56524 1084 aa23.19■■□□□ 1.3
CCDC9-204ENST00000599398 KLHL30Q0D2K2 578 aa23.19■■□□□ 1.3
CCDC9-204ENST00000599398 SFSWAPQ12872 951 aaKnown RBP23.19■■□□□ 1.3
CCDC9-204ENST00000599398 CST6Q15828 149 aa23.19■■□□□ 1.3
CCDC9-204ENST00000599398 DAB2IPQ5VWQ8 1189 aa23.19■■□□□ 1.3
CCDC9-204ENST00000599398 E4F1Q66K89 784 aaPredicted RBP23.19■■□□□ 1.3
CCDC9-204ENST00000599398 PPP1R2P3Q6NXS1 205 aa23.19■■□□□ 1.3
CCDC9-204ENST00000599398 CENPIQ92674 756 aaPredicted RBP23.19■■□□□ 1.3
CCDC9-204ENST00000599398 C2orf49Q9BVC5 232 aaPredicted RBP23.19■■□□□ 1.3
CCDC9-204ENST00000599398 GTPBP2Q9BX10 602 aaKnown RBP23.19■■□□□ 1.3
CCDC9-204ENST00000599398 EDEM3Q9BZQ6 932 aa23.19■■□□□ 1.3
CCDC9-204ENST00000599398 TTYH3Q9C0H2 523 aa23.19■■□□□ 1.3
CCDC9-204ENST00000599398 AIPL1Q9NZN9 384 aa23.19■■□□□ 1.3
CCDC9-204ENST00000599398 OR12D3Q9UGF7 316 aa23.19■■□□□ 1.3
CCDC9-204ENST00000599398 CACNA1EQ15878 2313 aa23.18■■□□□ 1.3
CCDC9-204ENST00000599398 TCRBV5S1A1TA0A578 114 aa23.18■■□□□ 1.3
CCDC9-204ENST00000599398 CCP110O43303 1012 aa23.18■■□□□ 1.3
CCDC9-204ENST00000599398 SEMA4FO95754 770 aa23.18■■□□□ 1.3
CCDC9-204ENST00000599398 SLC8A1P32418 973 aa23.18■■□□□ 1.3
CCDC9-204ENST00000599398 RPL7AP62424 266 aaKnown RBP23.18■■□□□ 1.3
CCDC9-204ENST00000599398 ELAVL3Q14576 367 aaKnown RBP23.18■■□□□ 1.3
CCDC9-204ENST00000599398 UAP1L1Q3KQV9 507 aa23.18■■□□□ 1.3
CCDC9-204ENST00000599398 PPM1JQ5JR12 505 aa23.18■■□□□ 1.3
CCDC9-204ENST00000599398 RWDD4Q6NW29 188 aaKnown RBP23.18■■□□□ 1.3
CCDC9-204ENST00000599398 ZNF571Q7Z3V5 609 aaPredicted RBP23.18■■□□□ 1.3
CCDC9-204ENST00000599398 CCDC185Q8N715 623 aa23.18■■□□□ 1.3
CCDC9-204ENST00000599398 FAM129BQ96TA1 746 aa23.18■■□□□ 1.3
CCDC9-204ENST00000599398 PSMB7Q99436 277 aa23.18■■□□□ 1.3
CCDC9-204ENST00000599398 OMDQ99983 421 aa23.18■■□□□ 1.3
CCDC9-204ENST00000599398 PCED1AQ9H1Q7 454 aa23.18■■□□□ 1.3
CCDC9-204ENST00000599398 C6orf106Q9H6K1 298 aaPredicted RBP23.18■■□□□ 1.3
CCDC9-204ENST00000599398 SGK2Q9HBY8 427 aa23.18■■□□□ 1.3
CCDC9-204ENST00000599398 A0A0D9SEW6 157 aa23.17■■□□□ 1.3
CCDC9-204ENST00000599398 A0A1W2PP55 124 aa23.17■■□□□ 1.3
CCDC9-204ENST00000599398 CDX4O14627 284 aaPredicted RBP23.17■■□□□ 1.3
CCDC9-204ENST00000599398 ATP9BO43861 1147 aa23.17■■□□□ 1.3
CCDC9-204ENST00000599398 BNIP3LO60238 219 aa23.17■■□□□ 1.3
CCDC9-204ENST00000599398 SNAP91O60641 907 aa23.17■■□□□ 1.3
CCDC9-204ENST00000599398 RNASEH2AO75792 299 aaKnown RBP23.17■■□□□ 1.3
CCDC9-204ENST00000599398 IL1BP01584 269 aa23.17■■□□□ 1.3
CCDC9-204ENST00000599398 SKILP12757 684 aa23.17■■□□□ 1.3
CCDC9-204ENST00000599398 DESP17661 470 aa23.17■■□□□ 1.3
CCDC9-204ENST00000599398 PRKCIP41743 596 aa23.17■■□□□ 1.3
CCDC9-204ENST00000599398 ZNF143P52747 638 aaPredicted RBP23.17■■□□□ 1.3
CCDC9-204ENST00000599398 DLG2Q15700 870 aa23.17■■□□□ 1.3
CCDC9-204ENST00000599398 FIGNQ5HY92 759 aa23.17■■□□□ 1.3
CCDC9-204ENST00000599398 SCYL2Q6P3W7 929 aa23.17■■□□□ 1.3
CCDC9-204ENST00000599398 USP30Q70CQ3 517 aa23.17■■□□□ 1.3
CCDC9-204ENST00000599398 DRC7Q8IY82 874 aa23.17■■□□□ 1.3
CCDC9-204ENST00000599398 ZCCHC9Q8N567 271 aaKnown RBP23.17■■□□□ 1.3
CCDC9-204ENST00000599398 ATP11CQ8NB49 1132 aa23.17■■□□□ 1.3
CCDC9-204ENST00000599398 FRS2Q8WU20 508 aa23.17■■□□□ 1.3
CCDC9-204ENST00000599398 DNASE2BQ8WZ79 361 aa23.17■■□□□ 1.3
CCDC9-204ENST00000599398 VCPIP1Q96JH7 1222 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms