RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 MTSS1LQ765P7 747 aa15.82■□□□□ 0.12
UPF1-206ENST00000598471 NETO2Q8NC67 525 aa15.82■□□□□ 0.12
UPF1-206ENST00000598471 BBOF1Q8ND07 529 aa15.82■□□□□ 0.12
UPF1-206ENST00000598471 SUSD6Q92537 303 aa15.82■□□□□ 0.12
UPF1-206ENST00000598471 IRF7Q92985 503 aa15.82■□□□□ 0.12
UPF1-206ENST00000598471 LRRC45Q96CN5 670 aa15.82■□□□□ 0.12
UPF1-206ENST00000598471 HMCESQ96FZ2 354 aa15.82■□□□□ 0.12
UPF1-206ENST00000598471 MUC3BQ9H195 1237 aa15.82■□□□□ 0.12
UPF1-206ENST00000598471 NOL6Q9H6R4 1146 aaKnown RBP15.82■□□□□ 0.12
UPF1-206ENST00000598471 C10orf88Q9H8K7 445 aa15.82■□□□□ 0.12
UPF1-206ENST00000598471 ANKZF1Q9H8Y5 726 aa15.82■□□□□ 0.12
UPF1-206ENST00000598471 EPB41L5Q9HCM4 733 aa15.82■□□□□ 0.12
UPF1-206ENST00000598471 SPHK2Q9NRA0 654 aa15.82■□□□□ 0.12
UPF1-206ENST00000598471 FAM114A2Q9NRY5 505 aa15.82■□□□□ 0.12
UPF1-206ENST00000598471 SEPT10Q9P0V9 454 aa15.82■□□□□ 0.12
UPF1-206ENST00000598471 PAK5Q9P286 719 aa15.82■□□□□ 0.12
UPF1-206ENST00000598471 DMGDHQ9UI17 866 aaKnown RBP15.82■□□□□ 0.12
UPF1-206ENST00000598471 IPO11Q9UI26 975 aaKnown RBP15.82■□□□□ 0.12
UPF1-206ENST00000598471 C5orf60A6NFR6 353 aa15.81■□□□□ 0.12
UPF1-206ENST00000598471 H3BQ06 376 aaPredicted RBP15.81■□□□□ 0.12
UPF1-206ENST00000598471 NEBLO76041 1014 aa15.81■□□□□ 0.12
UPF1-206ENST00000598471 LAMP2P13473 410 aa15.81■□□□□ 0.12
UPF1-206ENST00000598471 VAV1P15498 845 aa15.81■□□□□ 0.12
UPF1-206ENST00000598471 FCARP24071 287 aa15.81■□□□□ 0.12
UPF1-206ENST00000598471 HOXD9P28356 352 aaPredicted RBP15.81■□□□□ 0.12
UPF1-206ENST00000598471 ADCY8P40145 1251 aa15.81■□□□□ 0.12
UPF1-206ENST00000598471 GDF10P55107 478 aa15.81■□□□□ 0.12
UPF1-206ENST00000598471 TFF2Q03403 129 aa15.81■□□□□ 0.12
UPF1-206ENST00000598471 CUL1Q13616 776 aa15.81■□□□□ 0.12
UPF1-206ENST00000598471 TRIP13Q15645 432 aaPredicted RBP15.81■□□□□ 0.12
UPF1-206ENST00000598471 ARHGEF18Q6ZSZ5 1173 aa15.81■□□□□ 0.12
UPF1-206ENST00000598471 TP53INP2Q8IXH6 220 aa15.81■□□□□ 0.12
UPF1-206ENST00000598471 DOCK4Q8N1I0 1966 aa15.81■□□□□ 0.12
UPF1-206ENST00000598471 DEPDC1BQ8WUY9 529 aa15.81■□□□□ 0.12
UPF1-206ENST00000598471 ATP2A3Q93084 1043 aa15.81■□□□□ 0.12
UPF1-206ENST00000598471 HLA-CQ95604 372 aa15.81■□□□□ 0.12
UPF1-206ENST00000598471 FATE1Q969F0 183 aa15.81■□□□□ 0.12
UPF1-206ENST00000598471 ELSPBP1Q96BH3 223 aa15.81■□□□□ 0.12
UPF1-206ENST00000598471 P2RY11Q96G91 374 aa15.81■□□□□ 0.12
UPF1-206ENST00000598471 VAT1Q99536 393 aa15.81■□□□□ 0.12
UPF1-206ENST00000598471 BBS2Q9BXC9 721 aa15.81■□□□□ 0.12
UPF1-206ENST00000598471 TRIM31Q9BZY9 425 aa15.81■□□□□ 0.12
UPF1-206ENST00000598471 DPH5Q9H2P9 285 aa15.81■□□□□ 0.12
UPF1-206ENST00000598471 USP29Q9HBJ7 922 aa15.81■□□□□ 0.12
UPF1-206ENST00000598471 HAUS2Q9NVX0 235 aa15.81■□□□□ 0.12
UPF1-206ENST00000598471 MARK1Q9P0L2 795 aa15.81■□□□□ 0.12
UPF1-206ENST00000598471 HPCAL4Q9UM19 191 aa15.81■□□□□ 0.12
UPF1-206ENST00000598471 NEU2Q9Y3R4 380 aa15.81■□□□□ 0.12
UPF1-206ENST00000598471 A0A0A0MRY4 1105 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 NEDD8-MDP1E9PL57 170 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 RNF103O00237 685 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 MATN3O15232 486 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 MAFKO60675 156 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 OPHN1O60890 802 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 GCATO75600 419 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 PENKP01210 267 aaPredicted RBP15.8■□□□□ 0.12
UPF1-206ENST00000598471 KCNA5P22460 613 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 VPS41P49754 854 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 DRG2P55039 364 aaKnown RBP15.8■□□□□ 0.12
UPF1-206ENST00000598471 IL10RBQ08334 325 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 CALCOCO2Q13137 446 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 SERINC3Q13530 473 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 SLC12A1Q13621 1099 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 NAA30Q147X3 362 aaPredicted RBP15.8■□□□□ 0.12
UPF1-206ENST00000598471 LY6G5CQ5SRR4 150 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 FYB2Q5VWT5 728 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 RNF219Q5W0B1 726 aaPredicted RBP15.8■□□□□ 0.12
UPF1-206ENST00000598471 RNF43Q68DV7 783 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 DUPD1Q68J44 220 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 IL31Q6EBC2 164 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 TANGO2Q6ICL3 276 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 WDR93Q6P2C0 686 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 B4GALNT4Q76KP1 1039 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 TMEM25Q86YD3 366 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 MFSD6LQ8IWD5 586 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 FIBINQ8TAL6 211 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 ARHGEF2Q92974 986 aaKnown RBP15.8■□□□□ 0.12
UPF1-206ENST00000598471 BHMTQ93088 406 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 RSPRY1Q96DX4 576 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 SNF8Q96H20 258 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 SPATA13Q96N96 652 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 SPON2Q9BUD6 331 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 FAM129AQ9BZQ8 928 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 LINC00597Q9H2U6 94 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 ATP13A1Q9HD20 1204 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 GDF3Q9NR23 364 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 KIAA1522Q9P206 1035 aaPredicted RBP15.8■□□□□ 0.12
UPF1-206ENST00000598471 KLHL8Q9P2G9 620 aaPredicted RBP15.8■□□□□ 0.12
UPF1-206ENST00000598471 EPS15L1Q9UBC2 864 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 TRHDEQ9UKU6 1024 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 DENND4AQ7Z401 1863 aa15.8■□□□□ 0.12
UPF1-206ENST00000598471 ZSCAN5CA6NGD5 496 aaPredicted RBP15.79■□□□□ 0.12
UPF1-206ENST00000598471 ECI2O75521 394 aa15.79■□□□□ 0.12
UPF1-206ENST00000598471 TNFRSF8P28908 595 aa15.79■□□□□ 0.12
UPF1-206ENST00000598471 RPL22P35268 128 aaKnown RBP15.79■□□□□ 0.12
UPF1-206ENST00000598471 ACVRL1P37023 503 aa15.79■□□□□ 0.12
UPF1-206ENST00000598471 CLCN6P51797 869 aa15.79■□□□□ 0.12
UPF1-206ENST00000598471 IFI35P80217 286 aaPredicted RBP15.79■□□□□ 0.12
UPF1-206ENST00000598471 GAD2Q05329 585 aa15.79■□□□□ 0.12
UPF1-206ENST00000598471 GPS1Q13098 491 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms