RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 WHRNQ9P202 907 aa15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 TBC1D14Q9P2M4 693 aa15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 ASIC3Q9UHC3 531 aa15.1■□□□□ 0.01
SHKBP1-211ENST00000595945 A0A0A0MRY4 1105 aa15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 TP73O15350 636 aa15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 MTSS1O43312 755 aa15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 MAFKO60675 156 aa15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 RAMP2O60895 175 aa15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 SEC31AO94979 1220 aaKnown RBP15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 LUC7L3O95232 432 aaKnown RBP15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 IFNB1P01574 187 aa15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 MYBL2P10244 700 aa15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 H2AFXP16104 143 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 HOXD9P28356 352 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 OR1E1P30953 314 aa15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 VIPR2P41587 438 aa15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 CLCN6P51797 869 aa15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 IFI35P80217 286 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 ZNF177Q13360 481 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 SERINC3Q13530 473 aa15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 BRD3Q15059 726 aa15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 C6orf118Q5T5N4 469 aa15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 FYB2Q5VWT5 728 aa15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 ZDHHC24Q6UX98 284 aa15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 C4orf22Q6V702 233 aa15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 ZNF783Q6ZMS7 281 aa15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 ATPAF2Q8N5M1 289 aa15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 CCNYQ8ND76 341 aa15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 SUSD6Q92537 303 aa15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 MAML1Q92585 1016 aa15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 ARHGEF2Q92974 986 aaKnown RBP15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 SPATA13Q96N96 652 aa15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 NEUROG2Q9H2A3 272 aa15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 ZDHHC18Q9NUE0 388 aa15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 MARK1Q9P0L2 795 aa15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 IPO11Q9UI26 975 aaKnown RBP15.09■□□□□ 0.01
SHKBP1-211ENST00000595945 RNF103O00237 685 aa15.08■□□□□ 0
SHKBP1-211ENST00000595945 DNALI1O14645 258 aaPredicted RBP15.08■□□□□ 0
SHKBP1-211ENST00000595945 SLC9A3R1O14745 358 aaPredicted RBP15.08■□□□□ 0
SHKBP1-211ENST00000595945 MATN3O15232 486 aa15.08■□□□□ 0
SHKBP1-211ENST00000595945 PEX11BO96011 259 aa15.08■□□□□ 0
SHKBP1-211ENST00000595945 PENKP01210 267 aaPredicted RBP15.08■□□□□ 0
SHKBP1-211ENST00000595945 RHOCP08134 193 aa15.08■□□□□ 0
SHKBP1-211ENST00000595945 ITIH2P19823 946 aa15.08■□□□□ 0
SHKBP1-211ENST00000595945 PTPN3P26045 913 aa15.08■□□□□ 0
SHKBP1-211ENST00000595945 ACVRL1P37023 503 aa15.08■□□□□ 0
SHKBP1-211ENST00000595945 ADCY8P40145 1251 aa15.08■□□□□ 0
SHKBP1-211ENST00000595945 GNA12Q03113 381 aa15.08■□□□□ 0
SHKBP1-211ENST00000595945 GPS1Q13098 491 aa15.08■□□□□ 0
SHKBP1-211ENST00000595945 POLD3Q15054 466 aaPredicted RBP15.08■□□□□ 0
SHKBP1-211ENST00000595945 RHBDF2Q6PJF5 856 aa15.08■□□□□ 0
SHKBP1-211ENST00000595945 SMRP1Q8NCR6 262 aa15.08■□□□□ 0
SHKBP1-211ENST00000595945 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.08■□□□□ 0
SHKBP1-211ENST00000595945 ART4Q93070 314 aa15.08■□□□□ 0
SHKBP1-211ENST00000595945 SNF8Q96H20 258 aa15.08■□□□□ 0
SHKBP1-211ENST00000595945 LMLNQ96KR4 655 aa15.08■□□□□ 0
SHKBP1-211ENST00000595945 IL12RB2Q99665 862 aa15.08■□□□□ 0
SHKBP1-211ENST00000595945 FAM129AQ9BZQ8 928 aa15.08■□□□□ 0
SHKBP1-211ENST00000595945 LINC00597Q9H2U6 94 aa15.08■□□□□ 0
SHKBP1-211ENST00000595945 POMKQ9H5K3 350 aa15.08■□□□□ 0
SHKBP1-211ENST00000595945 PAK5Q9P286 719 aa15.08■□□□□ 0
SHKBP1-211ENST00000595945 COL4A3Q01955 1670 aa15.08■□□□□ 0
SHKBP1-211ENST00000595945 KIAA1549LQ6ZVL6 1849 aa15.08■□□□□ 0
SHKBP1-211ENST00000595945 TYW5A2RUC4 315 aaKnown RBP15.07■□□□□ 0
SHKBP1-211ENST00000595945 CCDC151A5D8V7 595 aa15.07■□□□□ 0
SHKBP1-211ENST00000595945 PRAMEF11O60813 436 aa15.07■□□□□ 0
SHKBP1-211ENST00000595945 OPHN1O60890 802 aa15.07■□□□□ 0
SHKBP1-211ENST00000595945 VPS41P49754 854 aa15.07■□□□□ 0
SHKBP1-211ENST00000595945 TNK2Q07912 1038 aa15.07■□□□□ 0
SHKBP1-211ENST00000595945 ZBTB17Q13105 803 aa15.07■□□□□ 0
SHKBP1-211ENST00000595945 EML3Q32P44 896 aa15.07■□□□□ 0
SHKBP1-211ENST00000595945 ANKRD20A2Q5SQ80 823 aa15.07■□□□□ 0
SHKBP1-211ENST00000595945 RNASEH2BQ5TBB1 312 aaKnown RBP15.07■□□□□ 0
SHKBP1-211ENST00000595945 ANKRD20A1Q5TYW2 823 aa15.07■□□□□ 0
SHKBP1-211ENST00000595945 ANKRD20A3Q5VUR7 823 aa15.07■□□□□ 0
SHKBP1-211ENST00000595945 IZUMO3Q5VZ72 239 aa15.07■□□□□ 0
SHKBP1-211ENST00000595945 TIGD7Q6NT04 549 aaPredicted RBP15.07■□□□□ 0
SHKBP1-211ENST00000595945 GPR153Q6NV75 609 aa15.07■□□□□ 0
SHKBP1-211ENST00000595945 TMEM25Q86YD3 366 aa15.07■□□□□ 0
SHKBP1-211ENST00000595945 ADGRG2Q8IZP9 1017 aa15.07■□□□□ 0
SHKBP1-211ENST00000595945 ZNF567Q8N184 647 aa15.07■□□□□ 0
SHKBP1-211ENST00000595945 CARNMT1Q8N4J0 409 aa15.07■□□□□ 0
SHKBP1-211ENST00000595945 BBOF1Q8ND07 529 aa15.07■□□□□ 0
SHKBP1-211ENST00000595945 TTC16Q8NEE8 873 aa15.07■□□□□ 0
SHKBP1-211ENST00000595945 OR7D4Q8NG98 312 aa15.07■□□□□ 0
SHKBP1-211ENST00000595945 CCDC110Q8TBZ0 833 aa15.07■□□□□ 0
SHKBP1-211ENST00000595945 WFDC5Q8TCV5 224 aa15.07■□□□□ 0
SHKBP1-211ENST00000595945 BPIFB1Q8TDL5 484 aa15.07■□□□□ 0
SHKBP1-211ENST00000595945 AENQ8WTP8 325 aaKnown RBP15.07■□□□□ 0
SHKBP1-211ENST00000595945 DDI1Q8WTU0 396 aa15.07■□□□□ 0
SHKBP1-211ENST00000595945 OSCP1Q8WVF1 389 aa15.07■□□□□ 0
SHKBP1-211ENST00000595945 IFT81Q8WYA0 676 aa15.07■□□□□ 0
SHKBP1-211ENST00000595945 IRF7Q92985 503 aa15.07■□□□□ 0
SHKBP1-211ENST00000595945 E2F7Q96AV8 911 aa15.07■□□□□ 0
SHKBP1-211ENST00000595945 LRRC45Q96CN5 670 aa15.07■□□□□ 0
SHKBP1-211ENST00000595945 ALG14Q96F25 216 aa15.07■□□□□ 0
SHKBP1-211ENST00000595945 FAM161BQ96MY7 647 aa15.07■□□□□ 0
SHKBP1-211ENST00000595945 NECTIN4Q96NY8 510 aa15.07■□□□□ 0
SHKBP1-211ENST00000595945 VAT1Q99536 393 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 458 ms