RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 WASH4PA8MWX3 477 aa14.72□□□□□ -0.05
LIG1-208ENST00000595758 H3BRJ5 948 aa14.72□□□□□ -0.05
LIG1-208ENST00000595758 PJA2O43164 708 aa14.72□□□□□ -0.05
LIG1-208ENST00000595758 ZBTB24O43167 697 aaPredicted RBP14.72□□□□□ -0.05
LIG1-208ENST00000595758 ARHGAP6O43182 974 aa14.72□□□□□ -0.05
LIG1-208ENST00000595758 NRDCO43847 1150 aa14.72□□□□□ -0.05
LIG1-208ENST00000595758 SYNCRIPO60506 623 aaKnown RBP14.72□□□□□ -0.05
LIG1-208ENST00000595758 BUB1BO60566 1050 aaPredicted RBP14.72□□□□□ -0.05
LIG1-208ENST00000595758 ALDH1A2O94788 518 aa14.72□□□□□ -0.05
LIG1-208ENST00000595758 SRPRAP08240 638 aaKnown RBP14.72□□□□□ -0.05
LIG1-208ENST00000595758 KRT7P08729 469 aa14.72□□□□□ -0.05
LIG1-208ENST00000595758 GOT1P17174 413 aa14.72□□□□□ -0.05
LIG1-208ENST00000595758 PRKCHP24723 683 aa14.72□□□□□ -0.05
LIG1-208ENST00000595758 ETFBP38117 255 aa14.72□□□□□ -0.05
LIG1-208ENST00000595758 ARL4AP40617 200 aa14.72□□□□□ -0.05
LIG1-208ENST00000595758 KRT81Q14533 505 aa14.72□□□□□ -0.05
LIG1-208ENST00000595758 STARD3Q14849 445 aa14.72□□□□□ -0.05
LIG1-208ENST00000595758 HEATR6Q6AI08 1181 aaKnown RBP14.72□□□□□ -0.05
LIG1-208ENST00000595758 KDM1BQ8NB78 822 aa14.72□□□□□ -0.05
LIG1-208ENST00000595758 CALR3Q96L12 384 aaKnown RBP14.72□□□□□ -0.05
LIG1-208ENST00000595758 MRGPRX3Q96LB0 322 aa14.72□□□□□ -0.05
LIG1-208ENST00000595758 FAM126AQ9BYI3 521 aaPredicted RBP14.72□□□□□ -0.05
LIG1-208ENST00000595758 TMEM245Q9H330 911 aa14.72□□□□□ -0.05
LIG1-208ENST00000595758 PCDH18Q9HCL0 1135 aa14.72□□□□□ -0.05
LIG1-208ENST00000595758 RAPGEFL1Q9UHV5 662 aa14.72□□□□□ -0.05
LIG1-208ENST00000595758 SLCO3A1Q9UIG8 710 aa14.72□□□□□ -0.05
LIG1-208ENST00000595758 RAD54BQ9Y620 910 aa14.72□□□□□ -0.05
LIG1-208ENST00000595758 DUSP10Q9Y6W6 482 aa14.72□□□□□ -0.05
LIG1-208ENST00000595758 DOCK4Q8N1I0 1966 aa14.72□□□□□ -0.05
LIG1-208ENST00000595758 TCRBV21S2A2A0A5A6 115 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 SPOPO43791 374 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 SNAP91O60641 907 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 RAMP2O60895 175 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 EPHX1P07099 455 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 HLA-EP13747 358 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 COMTP21964 271 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 NNMTP40261 264 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 PXNP49023 591 aaPredicted RBP14.71□□□□□ -0.05
LIG1-208ENST00000595758 FNTBP49356 437 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 NAP1L1P55209 391 aaKnown RBP14.71□□□□□ -0.05
LIG1-208ENST00000595758 CDH6P55285 790 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 DMWDQ09019 674 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 KIF5AQ12840 1032 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 POLD3Q15054 466 aaPredicted RBP14.71□□□□□ -0.05
LIG1-208ENST00000595758 ATP13A4Q4VNC1 1196 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 ZFYVE27Q5T4F4 411 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 IL31Q6EBC2 164 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 ANO7Q6IWH7 933 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 KIAA1211LQ6NV74 962 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 POLNQ7Z5Q5 900 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 UMODL1-AS1Q8N2C9 162 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 DCAF4L2Q8NA75 395 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 KCTD6Q8NC69 237 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 TPCN2Q8NHX9 752 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 NELL1Q92832 810 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 ATOH1Q92858 354 aaPredicted RBP14.71□□□□□ -0.05
LIG1-208ENST00000595758 ERLEC1Q96DZ1 483 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 RPL10LQ96L21 214 aaKnown RBP14.71□□□□□ -0.05
LIG1-208ENST00000595758 PSMB7Q99436 277 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 MAGEH1Q9H213 219 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 ATP13A1Q9HD20 1204 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 ZSCAN32Q9NX65 697 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 SUN2Q9UH99 717 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 VPS51Q9UID3 782 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 SALL4Q9UJQ4 1053 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 SLC25A13Q9UJS0 675 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 ADGRG1Q9Y653 693 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 ALG6Q9Y672 507 aa14.71□□□□□ -0.05
LIG1-208ENST00000595758 CBX4O00257 560 aa14.7□□□□□ -0.06
LIG1-208ENST00000595758 BUB1O43683 1085 aa14.7□□□□□ -0.06
LIG1-208ENST00000595758 ERCC2P18074 760 aa14.7□□□□□ -0.06
LIG1-208ENST00000595758 ACVRL1P37023 503 aa14.7□□□□□ -0.06
LIG1-208ENST00000595758 STK19P49842 368 aaPredicted RBP14.7□□□□□ -0.06
LIG1-208ENST00000595758 VASPP50552 380 aaPredicted RBP14.7□□□□□ -0.06
LIG1-208ENST00000595758 ARSEP51690 589 aa14.7□□□□□ -0.06
LIG1-208ENST00000595758 YBEYP58557 167 aaPredicted RBP14.7□□□□□ -0.06
LIG1-208ENST00000595758 DPYSQ14117 519 aa14.7□□□□□ -0.06
LIG1-208ENST00000595758 PDK2Q15119 407 aa14.7□□□□□ -0.06
LIG1-208ENST00000595758 LRRC38Q5VT99 294 aa14.7□□□□□ -0.06
LIG1-208ENST00000595758 C11orf63Q6NUN7 778 aa14.7□□□□□ -0.06
LIG1-208ENST00000595758 MAP7D3Q8IWC1 876 aa14.7□□□□□ -0.06
LIG1-208ENST00000595758 ZNF366Q8N895 744 aa14.7□□□□□ -0.06
LIG1-208ENST00000595758 FAM71BQ8TC56 605 aa14.7□□□□□ -0.06
LIG1-208ENST00000595758 HMGB4Q8WW32 186 aa14.7□□□□□ -0.06
LIG1-208ENST00000595758 ATRIPQ8WXE1 791 aa14.7□□□□□ -0.06
LIG1-208ENST00000595758 TSC1Q92574 1164 aa14.7□□□□□ -0.06
LIG1-208ENST00000595758 ARHGEF2Q92974 986 aaKnown RBP14.7□□□□□ -0.06
LIG1-208ENST00000595758 MYO19Q96H55 970 aa14.7□□□□□ -0.06
LIG1-208ENST00000595758 CSPG4P5Q96PW8 444 aa14.7□□□□□ -0.06
LIG1-208ENST00000595758 ACE2Q9BYF1 805 aaPredicted RBP14.7□□□□□ -0.06
LIG1-208ENST00000595758 NOL6Q9H6R4 1146 aaKnown RBP14.7□□□□□ -0.06
LIG1-208ENST00000595758 CD248Q9HCU0 757 aa14.7□□□□□ -0.06
LIG1-208ENST00000595758 BCCIPQ9P287 314 aaKnown RBP eCLIP14.7□□□□□ -0.06
LIG1-208ENST00000595758 RCOR3Q9P2K3 495 aaPredicted RBP14.7□□□□□ -0.06
LIG1-208ENST00000595758 EBF1Q9UH73 591 aa14.7□□□□□ -0.06
LIG1-208ENST00000595758 HYOU1Q9Y4L1 999 aa14.7□□□□□ -0.06
LIG1-208ENST00000595758 PCDHGA2Q9Y5H1 932 aa14.7□□□□□ -0.06
LIG1-208ENST00000595758 CCDC163A0A0D9SF12 145 aa14.69□□□□□ -0.06
LIG1-208ENST00000595758 TTC34A8MYJ7 566 aa14.69□□□□□ -0.06
LIG1-208ENST00000595758 RASA4BC9J798 803 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms