RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 CLCN1P35523 988 aa18.44■□□□□ 0.54
HOMER3-208ENST00000595756 KRT9P35527 623 aa18.44■□□□□ 0.54
HOMER3-208ENST00000595756 STAT1P42224 750 aa18.44■□□□□ 0.54
HOMER3-208ENST00000595756 KLK7P49862 253 aa18.44■□□□□ 0.54
HOMER3-208ENST00000595756 PLK1P53350 603 aa18.44■□□□□ 0.54
HOMER3-208ENST00000595756 SLC6A3Q01959 620 aa18.44■□□□□ 0.54
HOMER3-208ENST00000595756 KIF19Q2TAC6 998 aa18.44■□□□□ 0.54
HOMER3-208ENST00000595756 OR6B2Q6IFH4 312 aa18.44■□□□□ 0.54
HOMER3-208ENST00000595756 CXorf57Q6NSI4 855 aaKnown RBP18.44■□□□□ 0.54
HOMER3-208ENST00000595756 CIR1Q86X95 450 aaPredicted RBP18.44■□□□□ 0.54
HOMER3-208ENST00000595756 MMAAQ8IVH4 418 aaKnown RBP18.44■□□□□ 0.54
HOMER3-208ENST00000595756 GANCQ8TET4 914 aa18.44■□□□□ 0.54
HOMER3-208ENST00000595756 RNF34Q969K3 372 aa18.44■□□□□ 0.54
HOMER3-208ENST00000595756 IGSF8Q969P0 613 aa18.44■□□□□ 0.54
HOMER3-208ENST00000595756 EDEM3Q9BZQ6 932 aa18.44■□□□□ 0.54
HOMER3-208ENST00000595756 SYNCQ9H7C4 482 aa18.44■□□□□ 0.54
HOMER3-208ENST00000595756 RRN3Q9NYV6 651 aa18.44■□□□□ 0.54
HOMER3-208ENST00000595756 COX16Q9P0S2 106 aa18.44■□□□□ 0.54
HOMER3-208ENST00000595756 SLCO3A1Q9UIG8 710 aa18.44■□□□□ 0.54
HOMER3-208ENST00000595756 TPX2Q9ULW0 747 aaKnown RBP18.44■□□□□ 0.54
HOMER3-208ENST00000595756 MYO6Q9UM54 1294 aa18.44■□□□□ 0.54
HOMER3-208ENST00000595756 ANKRD6Q9Y2G4 727 aa18.44■□□□□ 0.54
HOMER3-208ENST00000595756 PKD1L2Q7Z442 2459 aa18.43■□□□□ 0.54
HOMER3-208ENST00000595756 PTPRBP23467 1997 aa18.43■□□□□ 0.54
HOMER3-208ENST00000595756 A0A1W2PPC4 97 aa18.43■□□□□ 0.54
HOMER3-208ENST00000595756 LRRC72A6NJI9 287 aa18.43■□□□□ 0.54
HOMER3-208ENST00000595756 F8VZ95 297 aa18.43■□□□□ 0.54
HOMER3-208ENST00000595756 GRAP2O75791 330 aa18.43■□□□□ 0.54
HOMER3-208ENST00000595756 RNASEH2AO75792 299 aaKnown RBP18.43■□□□□ 0.54
HOMER3-208ENST00000595756 MZF1P28698 734 aaPredicted RBP18.43■□□□□ 0.54
HOMER3-208ENST00000595756 CDH5P33151 784 aaPredicted RBP18.43■□□□□ 0.54
HOMER3-208ENST00000595756 NOS2P35228 1153 aa18.43■□□□□ 0.54
HOMER3-208ENST00000595756 NNMTP40261 264 aa18.43■□□□□ 0.54
HOMER3-208ENST00000595756 PSMD8P48556 350 aa18.43■□□□□ 0.54
HOMER3-208ENST00000595756 STK19P49842 368 aaPredicted RBP18.43■□□□□ 0.54
HOMER3-208ENST00000595756 CCT8P50990 548 aa18.43■□□□□ 0.54
HOMER3-208ENST00000595756 GALCP54803 685 aa18.43■□□□□ 0.54
HOMER3-208ENST00000595756 RACK1P63244 317 aaKnown RBP18.43■□□□□ 0.54
HOMER3-208ENST00000595756 CENPCQ03188 943 aa18.43■□□□□ 0.54
HOMER3-208ENST00000595756 FIGNQ5HY92 759 aa18.43■□□□□ 0.54
HOMER3-208ENST00000595756 OTUD1Q5VV17 481 aaPredicted RBP18.43■□□□□ 0.54
HOMER3-208ENST00000595756 FBXL22Q6P050 247 aa18.43■□□□□ 0.54
HOMER3-208ENST00000595756 CHCHD4Q8N4Q1 142 aa18.43■□□□□ 0.54
HOMER3-208ENST00000595756 OR2T34Q8NGX1 318 aa18.43■□□□□ 0.54
HOMER3-208ENST00000595756 SETD7Q8WTS6 366 aaKnown RBP18.43■□□□□ 0.54
HOMER3-208ENST00000595756 ZCCHC14Q8WYQ9 949 aaKnown RBP18.43■□□□□ 0.54
HOMER3-208ENST00000595756 PTPRN2Q92932 1015 aa18.43■□□□□ 0.54
HOMER3-208ENST00000595756 RPL10LQ96L21 214 aaKnown RBP18.43■□□□□ 0.54
HOMER3-208ENST00000595756 RPRD1AQ96P16 312 aaPredicted RBP18.43■□□□□ 0.54
HOMER3-208ENST00000595756 PPP1R9BQ96SB3 815 aa18.43■□□□□ 0.54
HOMER3-208ENST00000595756 FAM129BQ96TA1 746 aa18.43■□□□□ 0.54
HOMER3-208ENST00000595756 OMDQ99983 421 aa18.43■□□□□ 0.54
HOMER3-208ENST00000595756 NLRC4Q9NPP4 1024 aa18.43■□□□□ 0.54
HOMER3-208ENST00000595756 IFNKQ9P0W0 207 aa18.43■□□□□ 0.54
HOMER3-208ENST00000595756 APOBEC2Q9Y235 224 aaKnown RBP18.43■□□□□ 0.54
HOMER3-208ENST00000595756 SNX11Q9Y5W9 270 aa18.43■□□□□ 0.54
HOMER3-208ENST00000595756 CABIN1Q9Y6J0 2220 aa18.43■□□□□ 0.54
HOMER3-208ENST00000595756 FAM208BQ5VWN6 2430 aa18.43■□□□□ 0.54
HOMER3-208ENST00000595756 KNL1Q8NG31 2342 aa18.43■□□□□ 0.54
HOMER3-208ENST00000595756 COL5A1P20908 1838 aaPredicted RBP18.42■□□□□ 0.54
HOMER3-208ENST00000595756 PNMA6AP0CW24 399 aaPredicted RBP18.42■□□□□ 0.54
HOMER3-208ENST00000595756 C5AR1P21730 350 aa18.42■□□□□ 0.54
HOMER3-208ENST00000595756 SLC8A1P32418 973 aa18.42■□□□□ 0.54
HOMER3-208ENST00000595756 SOX5P35711 763 aa18.42■□□□□ 0.54
HOMER3-208ENST00000595756 SCNN1AP37088 669 aa18.42■□□□□ 0.54
HOMER3-208ENST00000595756 CTSKP43235 329 aa18.42■□□□□ 0.54
HOMER3-208ENST00000595756 JAM2P57087 298 aa18.42■□□□□ 0.54
HOMER3-208ENST00000595756 AUHQ13825 339 aaKnown RBP18.42■□□□□ 0.54
HOMER3-208ENST00000595756 SUZ12Q15022 739 aaKnown RBP18.42■□□□□ 0.54
HOMER3-208ENST00000595756 C5orf22Q49AR2 442 aa18.42■□□□□ 0.54
HOMER3-208ENST00000595756 NCEH1Q6PIU2 408 aa18.42■□□□□ 0.54
HOMER3-208ENST00000595756 SND1Q7KZF4 910 aaKnown RBP eCLIP18.42■□□□□ 0.54
HOMER3-208ENST00000595756 ADAT2Q7Z6V5 191 aaKnown RBP18.42■□□□□ 0.54
HOMER3-208ENST00000595756 ZNF677Q86XU0 584 aa18.42■□□□□ 0.54
HOMER3-208ENST00000595756 STK40Q8N2I9 435 aa18.42■□□□□ 0.54
HOMER3-208ENST00000595756 AADATQ8N5Z0 425 aa18.42■□□□□ 0.54
HOMER3-208ENST00000595756 FAM131CQ96AQ9 280 aa18.42■□□□□ 0.54
HOMER3-208ENST00000595756 CDC6Q99741 560 aa18.42■□□□□ 0.54
HOMER3-208ENST00000595756 NEUROG2Q9H2A3 272 aa18.42■□□□□ 0.54
HOMER3-208ENST00000595756 SLC25A13Q9UJS0 675 aa18.42■□□□□ 0.54
HOMER3-208ENST00000595756 VANGL2Q9ULK5 521 aa18.42■□□□□ 0.54
HOMER3-208ENST00000595756 HS3ST4Q9Y661 456 aa18.42■□□□□ 0.54
HOMER3-208ENST00000595756 DSPP15924 2871 aaKnown RBP18.42■□□□□ 0.54
HOMER3-208ENST00000595756 ANKRD11Q6UB99 2663 aaPredicted RBP18.42■□□□□ 0.54
HOMER3-208ENST00000595756 FAM47DPA6NHR8 397 aa18.41■□□□□ 0.54
HOMER3-208ENST00000595756 EPHB6O15197 1021 aa18.41■□□□□ 0.54
HOMER3-208ENST00000595756 PCDHGA12O60330 932 aa18.41■□□□□ 0.54
HOMER3-208ENST00000595756 CLDN11O75508 207 aa18.41■□□□□ 0.54
HOMER3-208ENST00000595756 GOT1P17174 413 aa18.41■□□□□ 0.54
HOMER3-208ENST00000595756 CCR5P51681 352 aa18.41■□□□□ 0.54
HOMER3-208ENST00000595756 ADPRHP54922 357 aa18.41■□□□□ 0.54
HOMER3-208ENST00000595756 NME3Q13232 169 aa18.41■□□□□ 0.54
HOMER3-208ENST00000595756 BRMS1LQ5PSV4 323 aa18.41■□□□□ 0.54
HOMER3-208ENST00000595756 LAYNQ6UX15 382 aa18.41■□□□□ 0.54
HOMER3-208ENST00000595756 TMEM35BQ8NCS4 154 aa18.41■□□□□ 0.54
HOMER3-208ENST00000595756 FRS2Q8WU20 508 aa18.41■□□□□ 0.54
HOMER3-208ENST00000595756 ALG14Q96F25 216 aa18.41■□□□□ 0.54
HOMER3-208ENST00000595756 PGAP3Q96FM1 320 aaPredicted RBP18.41■□□□□ 0.54
HOMER3-208ENST00000595756 SLC6A18Q96N87 628 aa18.41■□□□□ 0.54
HOMER3-208ENST00000595756 NPY6RQ99463 290 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms