RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 HIC2Q96JB3 615 aa13.52□□□□□ -0.25
VRK3-209ENST00000594948 OR52B2Q96RD2 323 aa13.52□□□□□ -0.25
VRK3-209ENST00000594948 GATA5Q9BWX5 397 aaPredicted RBP13.52□□□□□ -0.25
VRK3-209ENST00000594948 MRGBPQ9NV56 204 aa13.52□□□□□ -0.25
VRK3-209ENST00000594948 BFARQ9NZS9 450 aa13.52□□□□□ -0.25
VRK3-209ENST00000594948 ZCWPW2A0A1B0GU75 182 aa13.51□□□□□ -0.25
VRK3-209ENST00000594948 A0A1B0GVG6 124 aa13.51□□□□□ -0.25
VRK3-209ENST00000594948 PRSS51A0A1B0GVH4 220 aa13.51□□□□□ -0.25
VRK3-209ENST00000594948 AP3B1O00203 1094 aa13.51□□□□□ -0.25
VRK3-209ENST00000594948 TSPAN1O60635 241 aa13.51□□□□□ -0.25
VRK3-209ENST00000594948 TMCC1O94876 653 aa13.51□□□□□ -0.25
VRK3-209ENST00000594948 CRTAMO95727 393 aa13.51□□□□□ -0.25
VRK3-209ENST00000594948 DNAJB2P25686 324 aa13.51□□□□□ -0.25
VRK3-209ENST00000594948 PPARGP37231 505 aaPredicted RBP13.51□□□□□ -0.25
VRK3-209ENST00000594948 NPY2RP49146 381 aa13.51□□□□□ -0.25
VRK3-209ENST00000594948 RPL14P50914 215 aaKnown RBP13.51□□□□□ -0.25
VRK3-209ENST00000594948 AIF1P55008 147 aa13.51□□□□□ -0.25
VRK3-209ENST00000594948 CYLC2Q14093 348 aaPredicted RBP13.51□□□□□ -0.25
VRK3-209ENST00000594948 CNGA3Q16281 694 aa13.51□□□□□ -0.25
VRK3-209ENST00000594948 LIPMQ5VYY2 423 aa13.51□□□□□ -0.25
VRK3-209ENST00000594948 SEL1L3Q68CR1 1132 aa13.51□□□□□ -0.25
VRK3-209ENST00000594948 PDZD4Q76G19 769 aaPredicted RBP13.51□□□□□ -0.25
VRK3-209ENST00000594948 SNX32Q86XE0 403 aa13.51□□□□□ -0.25
VRK3-209ENST00000594948 RNF217Q8TC41 542 aa13.51□□□□□ -0.25
VRK3-209ENST00000594948 CLEC4CQ8WTT0 213 aa13.51□□□□□ -0.25
VRK3-209ENST00000594948 RNF139Q8WU17 664 aa13.51□□□□□ -0.25
VRK3-209ENST00000594948 IRGQQ8WZA9 623 aa13.51□□□□□ -0.25
VRK3-209ENST00000594948 OXCT2Q9BYC2 517 aaPredicted RBP13.51□□□□□ -0.25
VRK3-209ENST00000594948 UBE2OQ9C0C9 1292 aaKnown RBP13.51□□□□□ -0.25
VRK3-209ENST00000594948 BRD8Q9H0E9 1235 aa13.51□□□□□ -0.25
VRK3-209ENST00000594948 RBM38Q9H0Z9 239 aaKnown RBP13.51□□□□□ -0.25
VRK3-209ENST00000594948 ZNF358Q9NW07 568 aa13.51□□□□□ -0.25
VRK3-209ENST00000594948 HACD3Q9P035 362 aa13.51□□□□□ -0.25
VRK3-209ENST00000594948 DMTF1Q9Y222 760 aa13.51□□□□□ -0.25
VRK3-209ENST00000594948 SNX9Q9Y5X1 595 aa13.51□□□□□ -0.25
VRK3-209ENST00000594948 TANC1Q9C0D5 1861 aa13.51□□□□□ -0.25
VRK3-209ENST00000594948 UNCXA6NJT0 531 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 VILLO15195 856 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 ZMPSTE24O75844 475 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 BCAS2O75934 225 aaPredicted RBP13.5□□□□□ -0.25
VRK3-209ENST00000594948 C2P06681 752 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 COL6A2P12110 1019 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 ME2P23368 584 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 SULT1E1P49888 294 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 PEX6Q13608 980 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 APOFQ13790 326 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 DPYSQ14117 519 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 FLOT2Q14254 428 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 TREML2Q5T2D2 321 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 PDCD6IPQ8WUM4 868 aaKnown RBP13.5□□□□□ -0.25
VRK3-209ENST00000594948 KBTBD7Q8WVZ9 684 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 LZICQ8WZA0 190 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 NT5C3BQ969T7 300 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 AGAP3Q96P47 875 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 MAGEB5Q9BZ81 275 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 PRDM12Q9H4Q4 367 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 SUDS3Q9H7L9 328 aaPredicted RBP13.5□□□□□ -0.25
VRK3-209ENST00000594948 MRPL40Q9NQ50 206 aaKnown RBP13.5□□□□□ -0.25
VRK3-209ENST00000594948 MAN1C1Q9NR34 630 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 PIM2Q9P1W9 311 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 THEGQ9P2T0 379 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 VANGL2Q9ULK5 521 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 LZTS1Q9Y250 596 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 AP4B1Q9Y6B7 739 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 DNAJC25-GNG10A0A024R161 153 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 ARHGAP10A1A4S6 786 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.5□□□□□ -0.25
VRK3-209ENST00000594948 AIM2O14862 343 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 IRF6O14896 467 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 NCAM2O15394 837 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 MTSS1O43312 755 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 INSRRP14616 1297 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 ETS2P15036 469 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 SERPINB5P36952 375 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 POLD2P49005 469 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 THOP1P52888 689 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 NSUN2Q08J23 767 aaKnown RBP eCLIP13.5□□□□□ -0.25
VRK3-209ENST00000594948 MPP3Q13368 585 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 ZBTB6Q15916 424 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 ANO4Q32M45 955 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 LSM12Q3MHD2 195 aaKnown RBP13.5□□□□□ -0.25
VRK3-209ENST00000594948 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.5□□□□□ -0.25
VRK3-209ENST00000594948 INTS6LQ5JSJ4 861 aaKnown RBP13.5□□□□□ -0.25
VRK3-209ENST00000594948 KCTD11Q693B1 232 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 PID1Q7Z2X4 250 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 TNS4Q8IZW8 715 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 PYROXD2Q8N2H3 581 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 BEST2Q8NFU1 509 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 OR52K1Q8NGK4 314 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 OR6B3Q8NGW1 331 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 TOP1MTQ969P6 601 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 LENG1Q96BZ8 264 aaPredicted RBP13.5□□□□□ -0.25
VRK3-209ENST00000594948 MPP4Q96JB8 637 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 CDRT15Q96T59 188 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 SLC9A7Q96T83 725 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 GPR22Q99680 433 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 EFCAB1Q9HAE3 211 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 UBAP1Q9NZ09 502 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 CIDEBQ9UHD4 219 aa13.5□□□□□ -0.25
VRK3-209ENST00000594948 CDYLQ9Y232 598 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms