RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 PCGF5Q86SE9 256 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 TRABD2AQ86V40 505 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 SPATA18Q8TC71 538 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 KCTD13Q8WZ19 329 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 CENPIQ92674 756 aaPredicted RBP15.74■□□□□ 0.11
PNKP-204ENST00000594661 SKA1Q96BD8 255 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 ZFRQ96KR1 1074 aaKnown RBP15.74■□□□□ 0.11
PNKP-204ENST00000594661 SMOQ99835 787 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 RHOBTB2Q9BYZ6 727 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 NPHS2Q9NP85 383 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 CDH9Q9ULB4 789 aa15.74■□□□□ 0.11
PNKP-204ENST00000594661 SMG5Q9UPR3 1016 aaKnown RBP15.74■□□□□ 0.11
PNKP-204ENST00000594661 ARHGAP10A1A4S6 786 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 KBTBD13C9JR72 458 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 INPPL1O15357 1258 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 MYCP01106 439 aaPredicted RBP15.73■□□□□ 0.11
PNKP-204ENST00000594661 GSTT2P0CG29 244 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 GSTT2BP0CG30 244 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 IL4RP24394 825 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 KRT81Q14533 505 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 NADK2Q4G0N4 442 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 BOLA3Q53S33 107 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 AAGABQ6PD74 315 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 DHRS4L2Q6PKH6 230 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 NPNTQ6UXI9 565 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 RIPOR1Q6ZS17 1223 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 CENPUQ71F23 418 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 UNC45BQ8IWX7 931 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 TAB3Q8N5C8 712 aaPredicted RBP15.73■□□□□ 0.11
PNKP-204ENST00000594661 ZNF784Q8NCA9 323 aaPredicted RBP15.73■□□□□ 0.11
PNKP-204ENST00000594661 ZMIZ2Q8NF64 920 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 ZFP28Q8NHY6 868 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 FAM149B1Q96BN6 582 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 PANX3Q96QZ0 392 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 KCNK16Q96T55 309 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 TBCBQ99426 244 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 UNC93B1Q9H1C4 597 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.73■□□□□ 0.11
PNKP-204ENST00000594661 PPM1HQ9ULR3 514 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 M0QZQ0 153 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 TRMUO75648 421 aaKnown RBP15.73■□□□□ 0.11
PNKP-204ENST00000594661 ZBED1O96006 694 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 RBP3P10745 1247 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 ESRRAP11474 423 aaPredicted RBP15.73■□□□□ 0.11
PNKP-204ENST00000594661 COL6A2P12110 1019 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 RPL22P35268 128 aaKnown RBP15.73■□□□□ 0.11
PNKP-204ENST00000594661 PRMT2P55345 433 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 MRPS5P82675 430 aaKnown RBP15.73■□□□□ 0.11
PNKP-204ENST00000594661 PPIDQ08752 370 aaKnown RBP15.73■□□□□ 0.11
PNKP-204ENST00000594661 PDIA2Q13087 525 aaKnown RBP15.73■□□□□ 0.11
PNKP-204ENST00000594661 ARHGEF6Q15052 776 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 SFT2D3Q587I9 215 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 EFHC1Q5JVL4 640 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 C6orf163Q5TEZ5 329 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 PACS1Q6VY07 963 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 SLC24A5Q71RS6 500 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 GPRIN1Q7Z2K8 1008 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 ZNF280BQ86YH2 543 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 PPIL6Q8IXY8 311 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 DEFB106AQ8N104 65 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 METTL25Q8N6Q8 603 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 SCAIQ8N9R8 606 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 FAM71DQ8N9W8 422 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.73■□□□□ 0.11
PNKP-204ENST00000594661 FAM161BQ96MY7 647 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 CGREF1Q99674 301 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 LRRC4Q9HBW1 653 aa15.73■□□□□ 0.11
PNKP-204ENST00000594661 FARP1Q9Y4F1 1045 aaPredicted RBP15.73■□□□□ 0.11
PNKP-204ENST00000594661 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.73■□□□□ 0.11
PNKP-204ENST00000594661 EXOC1LA0A1B0GW35 172 aa15.72■□□□□ 0.11
PNKP-204ENST00000594661 FBP2O00757 339 aa15.72■□□□□ 0.11
PNKP-204ENST00000594661 MDM4O15151 490 aa15.72■□□□□ 0.11
PNKP-204ENST00000594661 CAPN15O75808 1086 aa15.72■□□□□ 0.11
PNKP-204ENST00000594661 CLPTM1O96005 669 aa15.72■□□□□ 0.11
PNKP-204ENST00000594661 CYP11A1P05108 521 aa15.72■□□□□ 0.11
PNKP-204ENST00000594661 PCSK1P29120 753 aa15.72■□□□□ 0.11
PNKP-204ENST00000594661 PCSK6P29122 969 aa15.72■□□□□ 0.11
PNKP-204ENST00000594661 SLC5A2P31639 672 aa15.72■□□□□ 0.11
PNKP-204ENST00000594661 MATKP42679 507 aa15.72■□□□□ 0.11
PNKP-204ENST00000594661 TKTL1P51854 596 aa15.72■□□□□ 0.11
PNKP-204ENST00000594661 PITX1P78337 314 aaPredicted RBP15.72■□□□□ 0.11
PNKP-204ENST00000594661 TFDP2Q14188 446 aa15.72■□□□□ 0.11
PNKP-204ENST00000594661 HIF1AQ16665 826 aa15.72■□□□□ 0.11
PNKP-204ENST00000594661 OTUD1Q5VV17 481 aaPredicted RBP15.72■□□□□ 0.11
PNKP-204ENST00000594661 ANKRD22Q5VYY1 191 aa15.72■□□□□ 0.11
PNKP-204ENST00000594661 CAPN12Q6ZSI9 719 aa15.72■□□□□ 0.11
PNKP-204ENST00000594661 LRRC8DQ7L1W4 858 aa15.72■□□□□ 0.11
PNKP-204ENST00000594661 SIX6OS1Q8N1H7 587 aa15.72■□□□□ 0.11
PNKP-204ENST00000594661 ZNF75CPQ92670 426 aaPredicted RBP15.72■□□□□ 0.11
PNKP-204ENST00000594661 MYLPFQ96A32 169 aa15.72■□□□□ 0.11
PNKP-204ENST00000594661 UROC1Q96N76 676 aa15.72■□□□□ 0.11
PNKP-204ENST00000594661 MAGEB5Q9BZ81 275 aa15.72■□□□□ 0.11
PNKP-204ENST00000594661 VPS37BQ9H9H4 285 aa15.72■□□□□ 0.11
PNKP-204ENST00000594661 ARHGEF4Q9NR80 690 aa15.72■□□□□ 0.11
PNKP-204ENST00000594661 HEY2Q9UBP5 337 aa15.72■□□□□ 0.11
PNKP-204ENST00000594661 C15orf38-AP3S2A0A0A6YYH1 394 aa15.71■□□□□ 0.11
PNKP-204ENST00000594661 NRP1O14786 923 aa15.71■□□□□ 0.11
PNKP-204ENST00000594661 ALOX15BO15296 676 aa15.71■□□□□ 0.11
PNKP-204ENST00000594661 DAB1O75553 588 aa15.71■□□□□ 0.11
PNKP-204ENST00000594661 CIB2O75838 187 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms