RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 ACADVLP49748 655 aa16.38■□□□□ 0.21
GTF2F1-203ENST00000594213 NUCB2P80303 420 aa16.38■□□□□ 0.21
GTF2F1-203ENST00000594213 CDK17Q00537 523 aa16.38■□□□□ 0.21
GTF2F1-203ENST00000594213 BNIP3Q12983 259 aa16.38■□□□□ 0.21
GTF2F1-203ENST00000594213 DNAJC3Q13217 504 aa16.38■□□□□ 0.21
GTF2F1-203ENST00000594213 TTC39BQ5VTQ0 682 aaPredicted RBP16.38■□□□□ 0.21
GTF2F1-203ENST00000594213 NAPEPLDQ6IQ20 393 aa16.38■□□□□ 0.21
GTF2F1-203ENST00000594213 GJB7Q6PEY0 223 aa16.38■□□□□ 0.21
GTF2F1-203ENST00000594213 ENOSF1Q7L5Y1 443 aa16.38■□□□□ 0.21
GTF2F1-203ENST00000594213 DEFB106AQ8N104 65 aa16.38■□□□□ 0.21
GTF2F1-203ENST00000594213 MFSD2AQ8NA29 543 aa16.38■□□□□ 0.21
GTF2F1-203ENST00000594213 CPXM1Q96SM3 734 aa16.38■□□□□ 0.21
GTF2F1-203ENST00000594213 FEM1AQ9BSK4 669 aa16.38■□□□□ 0.21
GTF2F1-203ENST00000594213 SLC12A6Q9UHW9 1150 aa16.38■□□□□ 0.21
GTF2F1-203ENST00000594213 ARID1BQ8NFD5 2236 aaPredicted RBP16.38■□□□□ 0.21
GTF2F1-203ENST00000594213 TBC1D3DA0A087WVF3 549 aa16.37■□□□□ 0.21
GTF2F1-203ENST00000594213 TBC1D3IA0A087WXS9 549 aa16.37■□□□□ 0.21
GTF2F1-203ENST00000594213 TBC1D3EA0A087X179 549 aa16.37■□□□□ 0.21
GTF2F1-203ENST00000594213 TBC1D3KA0A087X1G2 549 aa16.37■□□□□ 0.21
GTF2F1-203ENST00000594213 TBC1D3FA6NER0 549 aaPredicted RBP16.37■□□□□ 0.21
GTF2F1-203ENST00000594213 TBC1D3LB9A6J9 549 aa16.37■□□□□ 0.21
GTF2F1-203ENST00000594213 PLK4O00444 970 aa16.37■□□□□ 0.21
GTF2F1-203ENST00000594213 BIN1O00499 593 aa16.37■□□□□ 0.21
GTF2F1-203ENST00000594213 SLC7A4O43246 635 aa16.37■□□□□ 0.21
GTF2F1-203ENST00000594213 THAP12O43422 761 aa16.37■□□□□ 0.21
GTF2F1-203ENST00000594213 PLRG1O43660 514 aaKnown RBP16.37■□□□□ 0.21
GTF2F1-203ENST00000594213 RTN2O75298 545 aa16.37■□□□□ 0.21
GTF2F1-203ENST00000594213 TBC1D3HP0C7X1 549 aa16.37■□□□□ 0.21
GTF2F1-203ENST00000594213 ABCB4P21439 1286 aa16.37■□□□□ 0.21
GTF2F1-203ENST00000594213 CCR1P32246 355 aa16.37■□□□□ 0.21
GTF2F1-203ENST00000594213 NUMBP49757 651 aa16.37■□□□□ 0.21
GTF2F1-203ENST00000594213 IRAK1P51617 712 aa16.37■□□□□ 0.21
GTF2F1-203ENST00000594213 OXCT1P55809 520 aa16.37■□□□□ 0.21
GTF2F1-203ENST00000594213 CLDN6P56747 220 aa16.37■□□□□ 0.21
GTF2F1-203ENST00000594213 PAK1Q13153 545 aa16.37■□□□□ 0.21
GTF2F1-203ENST00000594213 AUHQ13825 339 aaKnown RBP16.37■□□□□ 0.21
GTF2F1-203ENST00000594213 C5orf22Q49AR2 442 aa16.37■□□□□ 0.21
GTF2F1-203ENST00000594213 TBC1D3GQ6DHY5 549 aa16.37■□□□□ 0.21
GTF2F1-203ENST00000594213 TBC1D3CQ6IPX1 549 aa16.37■□□□□ 0.21
GTF2F1-203ENST00000594213 IQCHQ86VS3 1027 aa16.37■□□□□ 0.21
GTF2F1-203ENST00000594213 TBC1D3Q8IZP1 549 aaPredicted RBP16.37■□□□□ 0.21
GTF2F1-203ENST00000594213 EID2Q8N6I1 236 aa16.37■□□□□ 0.21
GTF2F1-203ENST00000594213 LRIG1Q96JA1 1093 aa16.37■□□□□ 0.21
GTF2F1-203ENST00000594213 DDIT4Q9NX09 232 aa16.37■□□□□ 0.21
GTF2F1-203ENST00000594213 TMEM131Q92545 1883 aa16.37■□□□□ 0.21
GTF2F1-203ENST00000594213 BPTFQ12830 3046 aa16.37■□□□□ 0.21
GTF2F1-203ENST00000594213 MCF2LO15068 1137 aa16.36■□□□□ 0.21
GTF2F1-203ENST00000594213 RFPL3O75679 317 aa16.36■□□□□ 0.21
GTF2F1-203ENST00000594213 SLC9A1P19634 815 aa16.36■□□□□ 0.21
GTF2F1-203ENST00000594213 NUDT1P36639 197 aa16.36■□□□□ 0.21
GTF2F1-203ENST00000594213 ARRB1P49407 418 aaPredicted RBP16.36■□□□□ 0.21
GTF2F1-203ENST00000594213 CENPCQ03188 943 aa16.36■□□□□ 0.21
GTF2F1-203ENST00000594213 DLG2Q15700 870 aa16.36■□□□□ 0.21
GTF2F1-203ENST00000594213 EFHC1Q5JVL4 640 aa16.36■□□□□ 0.21
GTF2F1-203ENST00000594213 RABGAP1LQ5R372 815 aa16.36■□□□□ 0.21
GTF2F1-203ENST00000594213 AGBL4Q5VU57 503 aa16.36■□□□□ 0.21
GTF2F1-203ENST00000594213 SMYD5Q6GMV2 418 aa16.36■□□□□ 0.21
GTF2F1-203ENST00000594213 FBXL19Q6PCT2 694 aa16.36■□□□□ 0.21
GTF2F1-203ENST00000594213 TRIM65Q6PJ69 517 aa16.36■□□□□ 0.21
GTF2F1-203ENST00000594213 C14orf80Q86SX3 495 aa16.36■□□□□ 0.21
GTF2F1-203ENST00000594213 PRPF39Q86UA1 669 aaKnown RBP16.36■□□□□ 0.21
GTF2F1-203ENST00000594213 TRIM69Q86WT6 500 aa16.36■□□□□ 0.21
GTF2F1-203ENST00000594213 OXR1Q8N573 874 aa16.36■□□□□ 0.21
GTF2F1-203ENST00000594213 OR8D1Q8WZ84 308 aa16.36■□□□□ 0.21
GTF2F1-203ENST00000594213 SHC3Q92529 594 aa16.36■□□□□ 0.21
GTF2F1-203ENST00000594213 PPP1R13BQ96KQ4 1090 aa16.36■□□□□ 0.21
GTF2F1-203ENST00000594213 CRACR2AQ9BSW2 395 aa16.36■□□□□ 0.21
GTF2F1-203ENST00000594213 FAM204AQ9H8W3 233 aa16.36■□□□□ 0.21
GTF2F1-203ENST00000594213 PCDHGC3Q9UN70 934 aa16.36■□□□□ 0.21
GTF2F1-203ENST00000594213 DMTF1Q9Y222 760 aa16.36■□□□□ 0.21
GTF2F1-203ENST00000594213 TBC1D30Q9Y2I9 924 aa16.36■□□□□ 0.21
GTF2F1-203ENST00000594213 COL5A1P20908 1838 aaPredicted RBP16.35■□□□□ 0.21
GTF2F1-203ENST00000594213 ALOX15BO15296 676 aa16.35■□□□□ 0.21
GTF2F1-203ENST00000594213 HSF2BPO75031 334 aa16.35■□□□□ 0.21
GTF2F1-203ENST00000594213 JUPP14923 745 aa16.35■□□□□ 0.21
GTF2F1-203ENST00000594213 TAS2R38P59533 333 aa16.35■□□□□ 0.21
GTF2F1-203ENST00000594213 APBA1Q02410 837 aa16.35■□□□□ 0.21
GTF2F1-203ENST00000594213 CNTN1Q12860 1018 aa16.35■□□□□ 0.21
GTF2F1-203ENST00000594213 OVGP1Q12889 678 aa16.35■□□□□ 0.21
GTF2F1-203ENST00000594213 SLC45A4Q5BKX6 768 aa16.35■□□□□ 0.21
GTF2F1-203ENST00000594213 ARTNQ5T4W7 220 aa16.35■□□□□ 0.21
GTF2F1-203ENST00000594213 OTUD1Q5VV17 481 aaPredicted RBP16.35■□□□□ 0.21
GTF2F1-203ENST00000594213 FAM46CQ5VWP2 391 aa16.35■□□□□ 0.21
GTF2F1-203ENST00000594213 OLFML1Q6UWY5 402 aa16.35■□□□□ 0.21
GTF2F1-203ENST00000594213 DSG4Q86SJ6 1040 aa16.35■□□□□ 0.21
GTF2F1-203ENST00000594213 CACTIN-AS1Q8N1I8 211 aa16.35■□□□□ 0.21
GTF2F1-203ENST00000594213 CRELD1Q96HD1 420 aa16.35■□□□□ 0.21
GTF2F1-203ENST00000594213 FAM81BQ96LP2 452 aa16.35■□□□□ 0.21
GTF2F1-203ENST00000594213 RPRD1AQ96P16 312 aaPredicted RBP16.35■□□□□ 0.21
GTF2F1-203ENST00000594213 HS3ST4Q9Y661 456 aa16.35■□□□□ 0.21
GTF2F1-203ENST00000594213 PLXNA2O75051 1894 aa16.34■□□□□ 0.21
GTF2F1-203ENST00000594213 GADD45BO75293 160 aaPredicted RBP16.34■□□□□ 0.21
GTF2F1-203ENST00000594213 GRAP2O75791 330 aa16.34■□□□□ 0.21
GTF2F1-203ENST00000594213 TARDBPQ13148 414 aaKnown RBP eCLIP16.34■□□□□ 0.21
GTF2F1-203ENST00000594213 MTA1Q13330 715 aa16.34■□□□□ 0.21
GTF2F1-203ENST00000594213 ILKQ13418 452 aa16.34■□□□□ 0.21
GTF2F1-203ENST00000594213 RTP5Q14D33 572 aa16.34■□□□□ 0.21
GTF2F1-203ENST00000594213 PROX2Q3B8N5 592 aa16.34■□□□□ 0.21
GTF2F1-203ENST00000594213 C11orf57Q6ZUT1 292 aaPredicted RBP16.34■□□□□ 0.21
GTF2F1-203ENST00000594213 Q6ZVU0 165 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms