RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 JCHAINP01591 159 aa20.11■□□□□ 0.81
CLIP3-206ENST00000593074 ALDH2P05091 517 aa20.11■□□□□ 0.81
CLIP3-206ENST00000593074 ERVK-10P10266 1014 aa20.11■□□□□ 0.81
CLIP3-206ENST00000593074 VARS2Q5ST30 1063 aaKnown RBP20.11■□□□□ 0.81
CLIP3-206ENST00000593074 ATG16L1Q676U5 607 aa20.11■□□□□ 0.81
CLIP3-206ENST00000593074 CES3Q6UWW8 571 aa20.11■□□□□ 0.81
CLIP3-206ENST00000593074 LZTR1Q8N653 840 aa20.11■□□□□ 0.81
CLIP3-206ENST00000593074 CNTD1Q8N815 330 aa20.11■□□□□ 0.81
CLIP3-206ENST00000593074 DNAAF3Q8N9W5 541 aa20.11■□□□□ 0.81
CLIP3-206ENST00000593074 ZNF669Q96BR6 464 aaPredicted RBP20.11■□□□□ 0.81
CLIP3-206ENST00000593074 FCRL2Q96LA5 508 aaPredicted RBP20.11■□□□□ 0.81
CLIP3-206ENST00000593074 CATSPERBQ9H7T0 1116 aa20.11■□□□□ 0.81
CLIP3-206ENST00000593074 SCML2Q9UQR0 700 aa20.11■□□□□ 0.81
CLIP3-206ENST00000593074 FAM237BA0A1B0GVD1 139 aa20.11■□□□□ 0.81
CLIP3-206ENST00000593074 A0A1W2PQH9 124 aa20.11■□□□□ 0.81
CLIP3-206ENST00000593074 KCNU1A8MYU2 1149 aa20.11■□□□□ 0.81
CLIP3-206ENST00000593074 PITPNM1O00562 1244 aa20.11■□□□□ 0.81
CLIP3-206ENST00000593074 BPGMP07738 259 aa20.11■□□□□ 0.81
CLIP3-206ENST00000593074 NPY2RP49146 381 aa20.11■□□□□ 0.81
CLIP3-206ENST00000593074 NRG1Q02297 640 aaPredicted RBP20.11■□□□□ 0.81
CLIP3-206ENST00000593074 RIPK1Q13546 671 aa20.11■□□□□ 0.81
CLIP3-206ENST00000593074 SNCBQ16143 134 aa20.11■□□□□ 0.81
CLIP3-206ENST00000593074 FAM43BQ6ZT52 329 aaPredicted RBP20.11■□□□□ 0.81
CLIP3-206ENST00000593074 CEP57Q86XR8 500 aa20.11■□□□□ 0.81
CLIP3-206ENST00000593074 KIF2BQ8N4N8 673 aa20.11■□□□□ 0.81
CLIP3-206ENST00000593074 ATPAF2Q8N5M1 289 aa20.11■□□□□ 0.81
CLIP3-206ENST00000593074 ISL2Q96A47 359 aa20.11■□□□□ 0.81
CLIP3-206ENST00000593074 E2F7Q96AV8 911 aa20.11■□□□□ 0.81
CLIP3-206ENST00000593074 C8orf48Q96LL4 319 aa20.11■□□□□ 0.81
CLIP3-206ENST00000593074 CASD1Q96PB1 797 aa20.11■□□□□ 0.81
CLIP3-206ENST00000593074 PGLYRP2Q96PD5 576 aa20.11■□□□□ 0.81
CLIP3-206ENST00000593074 TMEM51Q9NW97 253 aa20.11■□□□□ 0.81
CLIP3-206ENST00000593074 IL1RAPL1Q9NZN1 696 aa20.11■□□□□ 0.81
CLIP3-206ENST00000593074 ADAM28Q9UKQ2 775 aa20.11■□□□□ 0.81
CLIP3-206ENST00000593074 TRIM33Q9UPN9 1127 aa20.11■□□□□ 0.81
CLIP3-206ENST00000593074 GLRA3O75311 464 aa20.1■□□□□ 0.81
CLIP3-206ENST00000593074 TOP3BO95985 862 aaKnown RBP20.1■□□□□ 0.81
CLIP3-206ENST00000593074 BST1Q10588 318 aa20.1■□□□□ 0.81
CLIP3-206ENST00000593074 PDE1CQ14123 709 aaPredicted RBP20.1■□□□□ 0.81
CLIP3-206ENST00000593074 CTXN3Q4LDR2 81 aa20.1■□□□□ 0.81
CLIP3-206ENST00000593074 FAM171A1Q5VUB5 890 aa20.1■□□□□ 0.81
CLIP3-206ENST00000593074 NAPEPLDQ6IQ20 393 aa20.1■□□□□ 0.81
CLIP3-206ENST00000593074 MSANTD2Q6P1R3 559 aa20.1■□□□□ 0.81
CLIP3-206ENST00000593074 CLNKQ7Z7G1 428 aa20.1■□□□□ 0.81
CLIP3-206ENST00000593074 SERPINB11Q96P15 392 aa20.1■□□□□ 0.81
CLIP3-206ENST00000593074 IL22Q9GZX6 179 aa20.1■□□□□ 0.81
CLIP3-206ENST00000593074 LRMDAQ9H2I8 198 aa20.1■□□□□ 0.81
CLIP3-206ENST00000593074 OSER1Q9NX31 292 aa20.1■□□□□ 0.81
CLIP3-206ENST00000593074 SAGE1Q9NXZ1 904 aa20.1■□□□□ 0.81
CLIP3-206ENST00000593074 ZFP69BQ9UJL9 534 aa20.1■□□□□ 0.81
CLIP3-206ENST00000593074 PCDHB5Q9Y5E4 795 aa20.1■□□□□ 0.81
CLIP3-206ENST00000593074 NUMBLQ9Y6R0 609 aa20.1■□□□□ 0.81
CLIP3-206ENST00000593074 A0A0G2JND7 137 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 MAGEB16A2A368 324 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 AP3B1O00203 1094 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 DFFAO00273 331 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 PSMD3O43242 534 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 TMPRSS15P98073 1019 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 OCRLQ01968 901 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 PRPSAP1Q14558 356 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 CHI3L2Q15782 390 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 ANKRD20A4Q4UJ75 823 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 GRTP1Q5TC63 336 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 CES4AQ5XG92 561 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 AFMIDQ63HM1 303 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 ARHGAP36Q6ZRI8 547 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 MON1AQ86VX9 555 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 NUDCD3Q8IVD9 361 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 NUP93Q8N1F7 819 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 IL12RB2Q99665 862 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 TMEM120AQ9BXJ8 343 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 TXNDC16Q9P2K2 825 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 EMCNQ9ULC0 261 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 VWA8A3KMH1 1905 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 MAFKO60675 156 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 SNNO75324 88 aaPredicted RBP20.09■□□□□ 0.81
CLIP3-206ENST00000593074 GSRP00390 522 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 MYCP01106 439 aaPredicted RBP20.09■□□□□ 0.81
CLIP3-206ENST00000593074 KRT16P08779 473 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 T-ENOLP0DO92 83 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 DNAJB2P25686 324 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 TARSP26639 723 aaKnown RBP20.09■□□□□ 0.81
CLIP3-206ENST00000593074 ARFIP2P53365 341 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 CTC1Q2NKJ3 1217 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 TAF1BQ53T94 588 aaPredicted RBP20.09■□□□□ 0.81
CLIP3-206ENST00000593074 CERCAMQ5T4B2 595 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 MTDHQ86UE4 582 aaKnown RBP20.09■□□□□ 0.81
CLIP3-206ENST00000593074 ZNF419Q96HQ0 510 aaPredicted RBP20.09■□□□□ 0.81
CLIP3-206ENST00000593074 RBBP8Q99708 897 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 FBXO44Q9H4M3 255 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 SAR1AQ9NR31 198 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 SOX13Q9UN79 622 aa20.09■□□□□ 0.81
CLIP3-206ENST00000593074 MTO1Q9Y2Z2 717 aaKnown RBP20.09■□□□□ 0.81
CLIP3-206ENST00000593074 DNAJC6O75061 913 aa20.08■□□□□ 0.81
CLIP3-206ENST00000593074 ATP6V1G2O95670 118 aa20.08■□□□□ 0.81
CLIP3-206ENST00000593074 MAGEA11P43364 429 aa20.08■□□□□ 0.81
CLIP3-206ENST00000593074 MAGEA12P43365 314 aa20.08■□□□□ 0.81
CLIP3-206ENST00000593074 GATMP50440 423 aa20.08■□□□□ 0.81
CLIP3-206ENST00000593074 CDH17Q12864 832 aa20.08■□□□□ 0.81
CLIP3-206ENST00000593074 MRPL58Q14197 206 aaKnown RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms