RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 HNRNPA1L2Q32P51 320 aaKnown RBP15.71■□□□□ 0.11
TRIM47-206ENST00000592942 EFHC2Q5JST6 749 aa15.71■□□□□ 0.11
TRIM47-206ENST00000592942 C9orf64Q5T6V5 341 aa15.71■□□□□ 0.11
TRIM47-206ENST00000592942 RWDD4Q6NW29 188 aaKnown RBP15.71■□□□□ 0.11
TRIM47-206ENST00000592942 KBTBD6Q86V97 674 aa15.71■□□□□ 0.11
TRIM47-206ENST00000592942 TMPRSS6Q8IU80 811 aa15.71■□□□□ 0.11
TRIM47-206ENST00000592942 ZNF564Q8TBZ8 553 aaPredicted RBP15.71■□□□□ 0.11
TRIM47-206ENST00000592942 FRS2Q8WU20 508 aa15.71■□□□□ 0.11
TRIM47-206ENST00000592942 PTPRN2Q92932 1015 aa15.71■□□□□ 0.11
TRIM47-206ENST00000592942 TBC1D31Q96DN5 1066 aa15.71■□□□□ 0.11
TRIM47-206ENST00000592942 ZC3H10Q96K80 434 aaKnown RBP15.71■□□□□ 0.11
TRIM47-206ENST00000592942 PPP1R9BQ96SB3 815 aa15.71■□□□□ 0.11
TRIM47-206ENST00000592942 ACE2Q9BYF1 805 aaPredicted RBP15.71■□□□□ 0.11
TRIM47-206ENST00000592942 OSGEPQ9NPF4 335 aa15.71■□□□□ 0.11
TRIM47-206ENST00000592942 UVRAGQ9P2Y5 699 aa15.71■□□□□ 0.11
TRIM47-206ENST00000592942 SUN2Q9UH99 717 aa15.71■□□□□ 0.11
TRIM47-206ENST00000592942 IP6K2Q9UHH9 426 aa15.71■□□□□ 0.11
TRIM47-206ENST00000592942 MBD1Q9UIS9 605 aaPredicted RBP15.71■□□□□ 0.11
TRIM47-206ENST00000592942 GPR179Q6PRD1 2367 aa15.71■□□□□ 0.11
TRIM47-206ENST00000592942 CHD5Q8TDI0 1954 aa15.71■□□□□ 0.1
TRIM47-206ENST00000592942 MYO1FO00160 1098 aa15.7■□□□□ 0.1
TRIM47-206ENST00000592942 ATP9BO43861 1147 aa15.7■□□□□ 0.1
TRIM47-206ENST00000592942 CREB3O43889 395 aa15.7■□□□□ 0.1
TRIM47-206ENST00000592942 CD160O95971 181 aa15.7■□□□□ 0.1
TRIM47-206ENST00000592942 BCKDHBP21953 392 aa15.7■□□□□ 0.1
TRIM47-206ENST00000592942 EPHB2P29323 1055 aa15.7■□□□□ 0.1
TRIM47-206ENST00000592942 ACVRL1P37023 503 aa15.7■□□□□ 0.1
TRIM47-206ENST00000592942 SLC25A11Q02978 314 aaKnown RBP15.7■□□□□ 0.1
TRIM47-206ENST00000592942 GNA12Q03113 381 aa15.7■□□□□ 0.1
TRIM47-206ENST00000592942 STARD3Q14849 445 aa15.7■□□□□ 0.1
TRIM47-206ENST00000592942 TCEAL1Q15170 157 aa15.7■□□□□ 0.1
TRIM47-206ENST00000592942 USP39Q53GS9 565 aaKnown RBP15.7■□□□□ 0.1
TRIM47-206ENST00000592942 C6orf118Q5T5N4 469 aa15.7■□□□□ 0.1
TRIM47-206ENST00000592942 ZNF783Q6ZMS7 281 aa15.7■□□□□ 0.1
TRIM47-206ENST00000592942 METTL3Q86U44 580 aaKnown RBP15.7■□□□□ 0.1
TRIM47-206ENST00000592942 PSTKQ8IV42 348 aaKnown RBP15.7■□□□□ 0.1
TRIM47-206ENST00000592942 PGBD3Q8N328 593 aa15.7■□□□□ 0.1
TRIM47-206ENST00000592942 FAM160A2Q8N612 972 aaPredicted RBP15.7■□□□□ 0.1
TRIM47-206ENST00000592942 OR2T3Q8NH03 318 aa15.7■□□□□ 0.1
TRIM47-206ENST00000592942 SLC35G2Q8TBE7 412 aa15.7■□□□□ 0.1
TRIM47-206ENST00000592942 CTNNBL1Q8WYA6 563 aaPredicted RBP15.7■□□□□ 0.1
TRIM47-206ENST00000592942 KCTD15Q96SI1 283 aaPredicted RBP15.7■□□□□ 0.1
TRIM47-206ENST00000592942 FAM129BQ96TA1 746 aa15.7■□□□□ 0.1
TRIM47-206ENST00000592942 NCAPGQ9BPX3 1015 aa15.7■□□□□ 0.1
TRIM47-206ENST00000592942 MUC3BQ9H195 1237 aa15.7■□□□□ 0.1
TRIM47-206ENST00000592942 DUSP15Q9H1R2 295 aaPredicted RBP15.7■□□□□ 0.1
TRIM47-206ENST00000592942 DHX35Q9H5Z1 703 aaKnown RBP15.7■□□□□ 0.1
TRIM47-206ENST00000592942 DNAI1Q9UI46 699 aa15.7■□□□□ 0.1
TRIM47-206ENST00000592942 VPS51Q9UID3 782 aa15.7■□□□□ 0.1
TRIM47-206ENST00000592942 VPS28Q9UK41 221 aa15.7■□□□□ 0.1
TRIM47-206ENST00000592942 AP4E1Q9UPM8 1137 aa15.7■□□□□ 0.1
TRIM47-206ENST00000592942 SMG5Q9UPR3 1016 aaKnown RBP15.7■□□□□ 0.1
TRIM47-206ENST00000592942 SDK1Q7Z5N4 2213 aa15.7■□□□□ 0.1
TRIM47-206ENST00000592942 PRPSAP2O60256 369 aa15.69■□□□□ 0.1
TRIM47-206ENST00000592942 SYNCRIPO60506 623 aaKnown RBP15.69■□□□□ 0.1
TRIM47-206ENST00000592942 SIN3BO75182 1162 aa15.69■□□□□ 0.1
TRIM47-206ENST00000592942 RARAP10276 462 aa15.69■□□□□ 0.1
TRIM47-206ENST00000592942 VAV1P15498 845 aa15.69■□□□□ 0.1
TRIM47-206ENST00000592942 DESP17661 470 aa15.69■□□□□ 0.1
TRIM47-206ENST00000592942 MAPKAPK2P49137 400 aa15.69■□□□□ 0.1
TRIM47-206ENST00000592942 ST8SIA6P61647 398 aa15.69■□□□□ 0.1
TRIM47-206ENST00000592942 ARF5P84085 180 aa15.69■□□□□ 0.1
TRIM47-206ENST00000592942 LPAL2Q16609 132 aa15.69■□□□□ 0.1
TRIM47-206ENST00000592942 PLK5Q496M5 336 aa15.69■□□□□ 0.1
TRIM47-206ENST00000592942 BOLA3Q53S33 107 aa15.69■□□□□ 0.1
TRIM47-206ENST00000592942 KCNT1Q5JUK3 1230 aa15.69■□□□□ 0.1
TRIM47-206ENST00000592942 TMEM139Q8IV31 216 aa15.69■□□□□ 0.1
TRIM47-206ENST00000592942 CCDC170Q8IYT3 715 aa15.69■□□□□ 0.1
TRIM47-206ENST00000592942 SH2D3CQ8N5H7 860 aa15.69■□□□□ 0.1
TRIM47-206ENST00000592942 RTL3Q8N8U3 475 aaKnown RBP15.69■□□□□ 0.1
TRIM47-206ENST00000592942 DCAF4L2Q8NA75 395 aa15.69■□□□□ 0.1
TRIM47-206ENST00000592942 ARHGEF2Q92974 986 aaKnown RBP15.69■□□□□ 0.1
TRIM47-206ENST00000592942 KLC2Q9H0B6 622 aa15.69■□□□□ 0.1
TRIM47-206ENST00000592942 PRDM16Q9HAZ2 1276 aa15.69■□□□□ 0.1
TRIM47-206ENST00000592942 ITM2CQ9NQX7 267 aa15.69■□□□□ 0.1
TRIM47-206ENST00000592942 BCCIPQ9P287 314 aaKnown RBP eCLIP15.69■□□□□ 0.1
TRIM47-206ENST00000592942 CTTNBP2NLQ9P2B4 639 aa15.69■□□□□ 0.1
TRIM47-206ENST00000592942 INTUQ9ULD6 942 aa15.69■□□□□ 0.1
TRIM47-206ENST00000592942 HS3ST2Q9Y278 367 aa15.69■□□□□ 0.1
TRIM47-206ENST00000592942 SPTBN4Q9H254 2564 aa15.69■□□□□ 0.1
TRIM47-206ENST00000592942 IGHV1OR15-9A0A0B4J2B8 117 aa15.68■□□□□ 0.1
TRIM47-206ENST00000592942 TARSL2A2RTX5 802 aaKnown RBP15.68■□□□□ 0.1
TRIM47-206ENST00000592942 SOWAHDA6NJG2 315 aa15.68■□□□□ 0.1
TRIM47-206ENST00000592942 EIF3CLB5ME19 914 aaKnown RBP15.68■□□□□ 0.1
TRIM47-206ENST00000592942 K7ERQ8 282 aa15.68■□□□□ 0.1
TRIM47-206ENST00000592942 SMAD6O43541 496 aaKnown RBP15.68■□□□□ 0.1
TRIM47-206ENST00000592942 ZNF821O75541 412 aaPredicted RBP15.68■□□□□ 0.1
TRIM47-206ENST00000592942 MTA2O94776 668 aa15.68■□□□□ 0.1
TRIM47-206ENST00000592942 PROSCO94903 275 aa15.68■□□□□ 0.1
TRIM47-206ENST00000592942 SRCP12931 536 aa15.68■□□□□ 0.1
TRIM47-206ENST00000592942 TGM1P22735 817 aa15.68■□□□□ 0.1
TRIM47-206ENST00000592942 MAGEA1P43355 309 aa15.68■□□□□ 0.1
TRIM47-206ENST00000592942 HCAR3P49019 387 aa15.68■□□□□ 0.1
TRIM47-206ENST00000592942 TAS2R40P59535 323 aa15.68■□□□□ 0.1
TRIM47-206ENST00000592942 RPS14P62263 151 aaKnown RBP15.68■□□□□ 0.1
TRIM47-206ENST00000592942 KRT83P78385 493 aa15.68■□□□□ 0.1
TRIM47-206ENST00000592942 DPYSL2Q16555 572 aa15.68■□□□□ 0.1
TRIM47-206ENST00000592942 ATP13A4Q4VNC1 1196 aa15.68■□□□□ 0.1
TRIM47-206ENST00000592942 RAD9BQ6WBX8 426 aa15.68■□□□□ 0.1
TRIM47-206ENST00000592942 PRR23BQ6ZRT6 265 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms