RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	TRIM38	O00635	465 aa		18.84	■□□□□ 0.61
CIRBP-238	ENST00000592412	BRINP1	O60477	761 aa		18.84	■□□□□ 0.61
CIRBP-238	ENST00000592412	SDC3	O75056	442 aa		18.84	■□□□□ 0.61
CIRBP-238	ENST00000592412	TRUB2	O95900	331 aa	Known RBP	18.84	■□□□□ 0.61
CIRBP-238	ENST00000592412	APOE	P02649	317 aa		18.84	■□□□□ 0.61
CIRBP-238	ENST00000592412	CD44	P16070	742 aa	Known RBP	18.84	■□□□□ 0.61
CIRBP-238	ENST00000592412	ACP1	P24666	158 aa		18.84	■□□□□ 0.61
CIRBP-238	ENST00000592412	IRAK1	P51617	712 aa		18.84	■□□□□ 0.61
CIRBP-238	ENST00000592412	PLK1	P53350	603 aa		18.84	■□□□□ 0.61
CIRBP-238	ENST00000592412	GCNT1	Q02742	428 aa		18.84	■□□□□ 0.61
CIRBP-238	ENST00000592412	C19orf57	Q0VDD7	668 aa		18.84	■□□□□ 0.61
CIRBP-238	ENST00000592412	SLC45A4	Q5BKX6	768 aa		18.84	■□□□□ 0.61
CIRBP-238	ENST00000592412	LRRC69	Q6ZNQ3	347 aa		18.84	■□□□□ 0.61
CIRBP-238	ENST00000592412	IQCH	Q86VS3	1027 aa		18.84	■□□□□ 0.61
CIRBP-238	ENST00000592412	CACTIN-AS1	Q8N1I8	211 aa		18.84	■□□□□ 0.61
CIRBP-238	ENST00000592412	SLC25A45	Q8N413	288 aa		18.84	■□□□□ 0.61
CIRBP-238	ENST00000592412	DCBLD1	Q8N8Z6	715 aa		18.84	■□□□□ 0.61
CIRBP-238	ENST00000592412	BTN2A3P	Q96KV6	586 aa		18.84	■□□□□ 0.61
CIRBP-238	ENST00000592412	METTL14	Q9HCE5	456 aa	Known RBP	18.84	■□□□□ 0.61
CIRBP-238	ENST00000592412	TJP2	Q9UDY2	1190 aa		18.84	■□□□□ 0.61
CIRBP-238	ENST00000592412	CNTN6	Q9UQ52	1028 aa		18.84	■□□□□ 0.61
CIRBP-238	ENST00000592412	KCNU1	A8MYU2	1149 aa		18.83	■□□□□ 0.6
CIRBP-238	ENST00000592412		E5RJQ4	531 aa		18.83	■□□□□ 0.6
CIRBP-238	ENST00000592412	SART1	O43290	800 aa	Known RBP	18.83	■□□□□ 0.6
CIRBP-238	ENST00000592412	TAS2R38	P59533	333 aa		18.83	■□□□□ 0.6
CIRBP-238	ENST00000592412	CNTN1	Q12860	1018 aa		18.83	■□□□□ 0.6
CIRBP-238	ENST00000592412	SLC12A1	Q13621	1099 aa		18.83	■□□□□ 0.6
CIRBP-238	ENST00000592412	TAF5	Q15542	800 aa		18.83	■□□□□ 0.6
CIRBP-238	ENST00000592412	POM121L1P	Q3SYA9	428 aa		18.83	■□□□□ 0.6
CIRBP-238	ENST00000592412	PRPF39	Q86UA1	669 aa	Known RBP	18.83	■□□□□ 0.6
CIRBP-238	ENST00000592412	TRIM69	Q86WT6	500 aa		18.83	■□□□□ 0.6
CIRBP-238	ENST00000592412	ERICH1	Q86X53	443 aa		18.83	■□□□□ 0.6
CIRBP-238	ENST00000592412	KDM4C	Q9H3R0	1056 aa		18.83	■□□□□ 0.6
CIRBP-238	ENST00000592412	PPM1H	Q9ULR3	514 aa		18.83	■□□□□ 0.6
CIRBP-238	ENST00000592412		F5H5T6	163 aa		18.82	■□□□□ 0.6
CIRBP-238	ENST00000592412	CAPN9	O14815	690 aa		18.82	■□□□□ 0.6
CIRBP-238	ENST00000592412	SLC7A4	O43246	635 aa		18.82	■□□□□ 0.6
CIRBP-238	ENST00000592412	SIGLEC6	O43699	453 aa		18.82	■□□□□ 0.6
CIRBP-238	ENST00000592412	ATP9B	O43861	1147 aa		18.82	■□□□□ 0.6
CIRBP-238	ENST00000592412	GLDC	P23378	1020 aa		18.82	■□□□□ 0.6
CIRBP-238	ENST00000592412	VASP	P50552	380 aa	Predicted RBP	18.82	■□□□□ 0.6
CIRBP-238	ENST00000592412	CENPC	Q03188	943 aa		18.82	■□□□□ 0.6
CIRBP-238	ENST00000592412	TLE3	Q04726	772 aa		18.82	■□□□□ 0.6
CIRBP-238	ENST00000592412	TMEM110	Q86TL2	294 aa		18.82	■□□□□ 0.6
CIRBP-238	ENST00000592412	STK32A	Q8WU08	396 aa		18.82	■□□□□ 0.6
CIRBP-238	ENST00000592412	FGF11	Q92914	225 aa		18.82	■□□□□ 0.6
CIRBP-238	ENST00000592412	POPDC2	Q9HBU9	364 aa		18.82	■□□□□ 0.6
CIRBP-238	ENST00000592412	ACP6	Q9NPH0	428 aa		18.82	■□□□□ 0.6
CIRBP-238	ENST00000592412	CLCA2	Q9UQC9	943 aa		18.82	■□□□□ 0.6
CIRBP-238	ENST00000592412	DMTF1	Q9Y222	760 aa		18.82	■□□□□ 0.6
CIRBP-238	ENST00000592412	OR51B4	Q9Y5P0	310 aa		18.82	■□□□□ 0.6
CIRBP-238	ENST00000592412		A0A1B0GVM2	712 aa		18.81	■□□□□ 0.6
CIRBP-238	ENST00000592412	TCAF2	A6NFQ2	919 aa		18.81	■□□□□ 0.6
CIRBP-238	ENST00000592412	P4HA2	O15460	535 aa		18.81	■□□□□ 0.6
CIRBP-238	ENST00000592412	RRP8	O43159	456 aa	Known RBP	18.81	■□□□□ 0.6
CIRBP-238	ENST00000592412	GIMD1	P0DJR0	217 aa		18.81	■□□□□ 0.6
CIRBP-238	ENST00000592412	ACADSB	P45954	432 aa		18.81	■□□□□ 0.6
CIRBP-238	ENST00000592412	YWHAZ	P63104	245 aa	Known RBP	18.81	■□□□□ 0.6
CIRBP-238	ENST00000592412	SULT2A1	Q06520	285 aa		18.81	■□□□□ 0.6
CIRBP-238	ENST00000592412	OVGP1	Q12889	678 aa		18.81	■□□□□ 0.6
CIRBP-238	ENST00000592412	FBXL22	Q6P050	247 aa		18.81	■□□□□ 0.6
CIRBP-238	ENST00000592412		Q6ZVU0	165 aa		18.81	■□□□□ 0.6
CIRBP-238	ENST00000592412	TMEM145	Q8NBT3	493 aa		18.81	■□□□□ 0.6
CIRBP-238	ENST00000592412	EHBP1	Q8NDI1	1231 aa		18.81	■□□□□ 0.6
CIRBP-238	ENST00000592412	OR8D1	Q8WZ84	308 aa		18.81	■□□□□ 0.6
CIRBP-238	ENST00000592412	CEP63	Q96MT8	703 aa		18.81	■□□□□ 0.6
CIRBP-238	ENST00000592412	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	18.81	■□□□□ 0.6
CIRBP-238	ENST00000592412	UCKL1	Q9NWZ5	548 aa		18.81	■□□□□ 0.6
CIRBP-238	ENST00000592412	PCDHB1	Q9Y5F3	818 aa		18.81	■□□□□ 0.6
CIRBP-238	ENST00000592412	MAST4	O15021	2626 aa		18.8	■□□□□ 0.6
CIRBP-238	ENST00000592412	RNF103	O00237	685 aa		18.8	■□□□□ 0.6
CIRBP-238	ENST00000592412	NUDT1	P36639	197 aa		18.8	■□□□□ 0.6
CIRBP-238	ENST00000592412	NNMT	P40261	264 aa		18.8	■□□□□ 0.6
CIRBP-238	ENST00000592412	MEA1	Q16626	185 aa		18.8	■□□□□ 0.6
CIRBP-238	ENST00000592412	TBC1D25	Q3MII6	688 aa		18.8	■□□□□ 0.6
CIRBP-238	ENST00000592412	CCDC40	Q4G0X9	1142 aa		18.8	■□□□□ 0.6
CIRBP-238	ENST00000592412	PIP5KL1	Q5T9C9	394 aa		18.8	■□□□□ 0.6
CIRBP-238	ENST00000592412	TTI2	Q6NXR4	508 aa		18.8	■□□□□ 0.6
CIRBP-238	ENST00000592412	SPACA3	Q8IXA5	215 aa		18.8	■□□□□ 0.6
CIRBP-238	ENST00000592412	ZNF843	Q8N446	348 aa		18.8	■□□□□ 0.6
CIRBP-238	ENST00000592412	ATP6V0D2	Q8N8Y2	350 aa		18.8	■□□□□ 0.6
CIRBP-238	ENST00000592412	BAP1	Q92560	729 aa		18.8	■□□□□ 0.6
CIRBP-238	ENST00000592412	PRAMEF26	H0Y7S4	382 aa		18.79	■□□□□ 0.6
CIRBP-238	ENST00000592412	MCF2L	O15068	1137 aa		18.79	■□□□□ 0.6
CIRBP-238	ENST00000592412	MT-CO3	P00414	261 aa		18.79	■□□□□ 0.6
CIRBP-238	ENST00000592412	CTSL	P07711	333 aa		18.79	■□□□□ 0.6
CIRBP-238	ENST00000592412	BMP6	P22004	513 aa		18.79	■□□□□ 0.6
CIRBP-238	ENST00000592412	DGKA	P23743	735 aa		18.79	■□□□□ 0.6
CIRBP-238	ENST00000592412	GGCX	P38435	758 aa		18.79	■□□□□ 0.6
CIRBP-238	ENST00000592412	NUCB2	P80303	420 aa		18.79	■□□□□ 0.6
CIRBP-238	ENST00000592412	CCDC173	Q0VFZ6	552 aa		18.79	■□□□□ 0.6
CIRBP-238	ENST00000592412	PDCL	Q13371	301 aa		18.79	■□□□□ 0.6
CIRBP-238	ENST00000592412	ZNF211	Q13398	564 aa	Predicted RBP	18.79	■□□□□ 0.6
CIRBP-238	ENST00000592412	STAT4	Q14765	748 aa		18.79	■□□□□ 0.6
CIRBP-238	ENST00000592412	DLG2	Q15700	870 aa		18.79	■□□□□ 0.6
CIRBP-238	ENST00000592412	TTC39B	Q5VTQ0	682 aa	Predicted RBP	18.79	■□□□□ 0.6
CIRBP-238	ENST00000592412	ISM2	Q6H9L7	571 aa		18.79	■□□□□ 0.6
CIRBP-238	ENST00000592412	KDM7A	Q6ZMT4	941 aa		18.79	■□□□□ 0.6
CIRBP-238	ENST00000592412	TRIM59	Q8IWR1	403 aa		18.79	■□□□□ 0.6
CIRBP-238	ENST00000592412	LSM14A	Q8ND56	463 aa	Known RBP	18.79	■□□□□ 0.6

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