RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 CXorf57Q6NSI4 855 aaKnown RBP10.34□□□□□ -0.75
BRCA1-227ENST00000591849 BNIPLQ7Z465 357 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 FAM124AQ86V42 546 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 CNGA4Q8IV77 575 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 FRMD1Q8N878 549 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 ATP11CQ8NB49 1132 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 PIGKQ92643 395 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 NTAN1Q96AB6 310 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 CCDC42Q96M95 316 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 EPAS1Q99814 870 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 MKRN2Q9H000 416 aaKnown RBP10.34□□□□□ -0.75
BRCA1-227ENST00000591849 MTG2Q9H4K7 406 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 ATP13A1Q9HD20 1204 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 ITM2CQ9NQX7 267 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 PPARGC1AQ9UBK2 798 aaKnown RBP10.34□□□□□ -0.75
BRCA1-227ENST00000591849 DNAI1Q9UI46 699 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 HPCAL4Q9UM19 191 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 TBC1D30Q9Y2I9 924 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 PCDHGA5Q9Y5G8 931 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 SPAG17Q6Q759 2223 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 CACNA1BQ00975 2339 aa10.34□□□□□ -0.75
BRCA1-227ENST00000591849 IGLV3-10A0A075B6K4 115 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 A0A087X0T9 212 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 IGHV1OR15-9A0A0B4J2B8 117 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 MEI4A8MW99 385 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 I6L893 689 aaPredicted RBP10.33□□□□□ -0.76
BRCA1-227ENST00000591849 CBX4O00257 560 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 FOXD2O60548 495 aaPredicted RBP10.33□□□□□ -0.76
BRCA1-227ENST00000591849 LRP3O75074 770 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 LRIG2O94898 1065 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 FAM228BP0C875 321 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 EPHB2P29323 1055 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 L1CAMP32004 1257 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 MPLP40238 635 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 DPP6P42658 865 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 RECQLP46063 649 aaPredicted RBP10.33□□□□□ -0.76
BRCA1-227ENST00000591849 DNA2P51530 1060 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 COPAP53621 1224 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 NRG1Q02297 640 aaPredicted RBP10.33□□□□□ -0.76
BRCA1-227ENST00000591849 GNA12Q03113 381 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 LMNB2Q03252 620 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 ZBTB16Q05516 673 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 PUM1Q14671 1186 aaKnown RBP eCLIP10.33□□□□□ -0.76
BRCA1-227ENST00000591849 DLG2Q15700 870 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 CCDC6Q16204 474 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 AASDHQ4L235 1098 aaPredicted RBP10.33□□□□□ -0.76
BRCA1-227ENST00000591849 PMS2CLQ68D20 193 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 RETSATQ6NUM9 610 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 ZNF783Q6ZMS7 281 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 DSG4Q86SJ6 1040 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 METTL3Q86U44 580 aaKnown RBP10.33□□□□□ -0.76
BRCA1-227ENST00000591849 ZNF683Q8IZ20 524 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 RGL4Q8IZJ4 473 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 OR7D4Q8NG98 312 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 CTNNBL1Q8WYA6 563 aaPredicted RBP10.33□□□□□ -0.76
BRCA1-227ENST00000591849 FOXJ1Q92949 421 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 TOE1Q96GM8 510 aaKnown RBP10.33□□□□□ -0.76
BRCA1-227ENST00000591849 MRGPRX3Q96LB0 322 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 CCDC114Q96M63 670 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 DNAJC7Q99615 494 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 OMDQ99983 421 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 NUP85Q9BW27 656 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 THAP2Q9H0W7 228 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 RBSNQ9H1K0 784 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 DHX35Q9H5Z1 703 aaKnown RBP10.33□□□□□ -0.76
BRCA1-227ENST00000591849 RETREG1Q9H6L5 497 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 CATSPERBQ9H7T0 1116 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 VPS45Q9NRW7 570 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 SEMA4GQ9NTN9 838 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 DONSONQ9NYP3 566 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 CTTNBP2NLQ9P2B4 639 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 ARHGAP20Q9P2F6 1191 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 MBD1Q9UIS9 605 aaPredicted RBP10.33□□□□□ -0.76
BRCA1-227ENST00000591849 FZD10Q9ULW2 581 aa10.33□□□□□ -0.76
BRCA1-227ENST00000591849 A0A0D9SEW6 157 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 BCLAF3A2AJT9 711 aaKnown RBP10.32□□□□□ -0.76
BRCA1-227ENST00000591849 PRR5-ARHGAP8B1AHC4 643 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 FAM72CH0Y354 149 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 MYO1FO00160 1098 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 SNAP91O60641 907 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 RAMP2O60895 175 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 MFAP3LO75121 409 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 IL1BP01584 269 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 H2AFZP0C0S5 128 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 HNRNPH3P31942 346 aaKnown RBP10.32□□□□□ -0.76
BRCA1-227ENST00000591849 MAPKAPK2P49137 400 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 TPMTP51580 245 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 GALCP54803 685 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 TPI1P60174 286 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 RPS14P62263 151 aaKnown RBP10.32□□□□□ -0.76
BRCA1-227ENST00000591849 ARHGAP8P85298 464 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 OGDHQ02218 1023 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 GFPT1Q06210 699 aaPredicted RBP10.32□□□□□ -0.76
BRCA1-227ENST00000591849 ZNF33AQ06730 810 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 SLC20A2Q08357 652 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 PIGHQ14442 188 aaPredicted RBP10.32□□□□□ -0.76
BRCA1-227ENST00000591849 POLD3Q15054 466 aaPredicted RBP10.32□□□□□ -0.76
BRCA1-227ENST00000591849 CSRP2Q16527 193 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 SPDYCQ5MJ68 293 aa10.32□□□□□ -0.76
BRCA1-227ENST00000591849 WDR45BQ5MNZ6 344 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms