RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 RETREG1Q9H6L5 497 aa11.66□□□□□ -0.54
TUBD1-211ENST00000591548 VIPAS39Q9H9C1 493 aa11.66□□□□□ -0.54
TUBD1-211ENST00000591548 DNAJC17Q9NVM6 304 aaKnown RBP11.66□□□□□ -0.54
TUBD1-211ENST00000591548 ARHGAP26Q9UNA1 814 aa11.66□□□□□ -0.54
TUBD1-211ENST00000591548 SOBPA7XYQ1 873 aa11.65□□□□□ -0.54
TUBD1-211ENST00000591548 MATN3O15232 486 aa11.65□□□□□ -0.54
TUBD1-211ENST00000591548 CHADO15335 359 aa11.65□□□□□ -0.54
TUBD1-211ENST00000591548 ZBTB24O43167 697 aaPredicted RBP11.65□□□□□ -0.54
TUBD1-211ENST00000591548 RAMP2O60895 175 aa11.65□□□□□ -0.54
TUBD1-211ENST00000591548 CLDN11O75508 207 aa11.65□□□□□ -0.54
TUBD1-211ENST00000591548 PEX11BO96011 259 aa11.65□□□□□ -0.54
TUBD1-211ENST00000591548 JCHAINP01591 159 aa11.65□□□□□ -0.54
TUBD1-211ENST00000591548 CCNB1P14635 433 aa11.65□□□□□ -0.54
TUBD1-211ENST00000591548 AVPR1AP37288 418 aa11.65□□□□□ -0.54
TUBD1-211ENST00000591548 PMS2P54278 862 aa11.65□□□□□ -0.54
TUBD1-211ENST00000591548 SEMA5AQ13591 1074 aa11.65□□□□□ -0.54
TUBD1-211ENST00000591548 SLMAPQ14BN4 828 aa11.65□□□□□ -0.54
TUBD1-211ENST00000591548 TEX44Q53QW1 395 aa11.65□□□□□ -0.54
TUBD1-211ENST00000591548 ARHGAP15Q53QZ3 475 aa11.65□□□□□ -0.54
TUBD1-211ENST00000591548 PID1Q7Z2X4 250 aa11.65□□□□□ -0.54
TUBD1-211ENST00000591548 BBS7Q8IWZ6 715 aa11.65□□□□□ -0.54
TUBD1-211ENST00000591548 IQCKQ8N0W5 287 aa11.65□□□□□ -0.54
TUBD1-211ENST00000591548 CNTD1Q8N815 330 aa11.65□□□□□ -0.54
TUBD1-211ENST00000591548 RIN3Q8TB24 985 aa11.65□□□□□ -0.54
TUBD1-211ENST00000591548 SH3RF2Q8TEC5 729 aa11.65□□□□□ -0.54
TUBD1-211ENST00000591548 SMG7Q92540 1137 aaKnown RBP11.65□□□□□ -0.54
TUBD1-211ENST00000591548 USP13Q92995 863 aaPredicted RBP11.65□□□□□ -0.54
TUBD1-211ENST00000591548 RBM15Q96T37 977 aaKnown RBP eCLIP11.65□□□□□ -0.54
TUBD1-211ENST00000591548 CDCA3Q99618 268 aaPredicted RBP11.65□□□□□ -0.54
TUBD1-211ENST00000591548 DDX50Q9BQ39 737 aaKnown RBP11.65□□□□□ -0.54
TUBD1-211ENST00000591548 FOXP3Q9BZS1 431 aa11.65□□□□□ -0.54
TUBD1-211ENST00000591548 TSPYL1Q9H0U9 437 aa11.65□□□□□ -0.54
TUBD1-211ENST00000591548 IGFLR1Q9H665 355 aa11.65□□□□□ -0.54
TUBD1-211ENST00000591548 PIDD1Q9HB75 910 aa11.65□□□□□ -0.54
TUBD1-211ENST00000591548 IPO11Q9UI26 975 aaKnown RBP11.65□□□□□ -0.54
TUBD1-211ENST00000591548 LSM7Q9UK45 103 aaKnown RBP11.65□□□□□ -0.54
TUBD1-211ENST00000591548 SH3BP1Q9Y3L3 701 aa11.65□□□□□ -0.54
TUBD1-211ENST00000591548 A0A1B0GVM2 712 aa11.64□□□□□ -0.55
TUBD1-211ENST00000591548 TCAF2A6NFQ2 919 aa11.64□□□□□ -0.55
TUBD1-211ENST00000591548 ARHGAP42A6NI28 874 aa11.64□□□□□ -0.55
TUBD1-211ENST00000591548 F5H423 210 aaPredicted RBP11.64□□□□□ -0.55
TUBD1-211ENST00000591548 J3KR12 359 aa11.64□□□□□ -0.55
TUBD1-211ENST00000591548 SMAPO00193 183 aa11.64□□□□□ -0.55
TUBD1-211ENST00000591548 ZNF197O14709 1029 aa11.64□□□□□ -0.55
TUBD1-211ENST00000591548 PRAMEF12O95522 483 aa11.64□□□□□ -0.55
TUBD1-211ENST00000591548 GLP2RO95838 553 aa11.64□□□□□ -0.55
TUBD1-211ENST00000591548 APRTP07741 180 aa11.64□□□□□ -0.55
TUBD1-211ENST00000591548 CEBPBP17676 345 aa11.64□□□□□ -0.55
TUBD1-211ENST00000591548 PSMB4P28070 264 aa11.64□□□□□ -0.55
TUBD1-211ENST00000591548 CD68P34810 354 aaPredicted RBP11.64□□□□□ -0.55
TUBD1-211ENST00000591548 ACVRL1P37023 503 aa11.64□□□□□ -0.55
TUBD1-211ENST00000591548 YBEYP58557 167 aaPredicted RBP11.64□□□□□ -0.55
TUBD1-211ENST00000591548 IFI35P80217 286 aaPredicted RBP11.64□□□□□ -0.55
TUBD1-211ENST00000591548 SERINC3Q13530 473 aa11.64□□□□□ -0.55
TUBD1-211ENST00000591548 CBX2Q14781 532 aaPredicted RBP11.64□□□□□ -0.55
TUBD1-211ENST00000591548 POLD3Q15054 466 aaPredicted RBP11.64□□□□□ -0.55
TUBD1-211ENST00000591548 PARP6Q2NL67 630 aa11.64□□□□□ -0.55
TUBD1-211ENST00000591548 PARP15Q460N3 678 aa11.64□□□□□ -0.55
TUBD1-211ENST00000591548 FNBP1LQ5T0N5 605 aa11.64□□□□□ -0.55
TUBD1-211ENST00000591548 CHRDL2Q6WN34 429 aa11.64□□□□□ -0.55
TUBD1-211ENST00000591548 CHST9Q7L1S5 443 aa11.64□□□□□ -0.55
TUBD1-211ENST00000591548 RELL1Q8IUW5 271 aa11.64□□□□□ -0.55
TUBD1-211ENST00000591548 ITFG1Q8TB96 612 aa11.64□□□□□ -0.55
TUBD1-211ENST00000591548 UBLCP1Q8WVY7 318 aaPredicted RBP11.64□□□□□ -0.55
TUBD1-211ENST00000591548 ING5Q8WYH8 240 aa11.64□□□□□ -0.55
TUBD1-211ENST00000591548 TEKT5Q96M29 485 aa11.64□□□□□ -0.55
TUBD1-211ENST00000591548 AGAP3Q96P47 875 aa11.64□□□□□ -0.55
TUBD1-211ENST00000591548 VAT1Q99536 393 aa11.64□□□□□ -0.55
TUBD1-211ENST00000591548 IL12RB2Q99665 862 aa11.64□□□□□ -0.55
TUBD1-211ENST00000591548 GORASP1Q9BQQ3 440 aa11.64□□□□□ -0.55
TUBD1-211ENST00000591548 PABPC3Q9H361 631 aaKnown RBP11.64□□□□□ -0.55
TUBD1-211ENST00000591548 SFXN1Q9H9B4 322 aa11.64□□□□□ -0.55
TUBD1-211ENST00000591548 TDP1Q9NUW8 608 aa11.64□□□□□ -0.55
TUBD1-211ENST00000591548 KLHL8Q9P2G9 620 aaPredicted RBP11.64□□□□□ -0.55
TUBD1-211ENST00000591548 IGSF9Q9P2J2 1179 aa11.64□□□□□ -0.55
TUBD1-211ENST00000591548 TRHDEQ9UKU6 1024 aa11.64□□□□□ -0.55
TUBD1-211ENST00000591548 TBC1D30Q9Y2I9 924 aa11.64□□□□□ -0.55
TUBD1-211ENST00000591548 HELZP42694 1942 aaKnown RBP11.64□□□□□ -0.55
TUBD1-211ENST00000591548 SHROOM3Q8TF72 1996 aa11.63□□□□□ -0.55
TUBD1-211ENST00000591548 A0A0D9SEW6 157 aa11.63□□□□□ -0.55
TUBD1-211ENST00000591548 E2F8A0AVK6 867 aa11.63□□□□□ -0.55
TUBD1-211ENST00000591548 AGPSO00116 658 aa11.63□□□□□ -0.55
TUBD1-211ENST00000591548 LINC01565O15544 149 aa11.63□□□□□ -0.55
TUBD1-211ENST00000591548 TBL1XO60907 577 aa11.63□□□□□ -0.55
TUBD1-211ENST00000591548 FDFT1P37268 417 aa11.63□□□□□ -0.55
TUBD1-211ENST00000591548 GNA12Q03113 381 aa11.63□□□□□ -0.55
TUBD1-211ENST00000591548 HYAL1Q12794 435 aa11.63□□□□□ -0.55
TUBD1-211ENST00000591548 HIF1AQ16665 826 aa11.63□□□□□ -0.55
TUBD1-211ENST00000591548 MSS51Q4VC12 460 aa11.63□□□□□ -0.55
TUBD1-211ENST00000591548 TCEAL5Q5H9L2 206 aa11.63□□□□□ -0.55
TUBD1-211ENST00000591548 SPDYCQ5MJ68 293 aa11.63□□□□□ -0.55
TUBD1-211ENST00000591548 CFAP58Q5T655 872 aa11.63□□□□□ -0.55
TUBD1-211ENST00000591548 TTC39BQ5VTQ0 682 aaPredicted RBP11.63□□□□□ -0.55
TUBD1-211ENST00000591548 TIGD7Q6NT04 549 aaPredicted RBP11.63□□□□□ -0.55
TUBD1-211ENST00000591548 TMEM184AQ6ZMB5 413 aa11.63□□□□□ -0.55
TUBD1-211ENST00000591548 CPXM2Q8N436 756 aa11.63□□□□□ -0.55
TUBD1-211ENST00000591548 USP33Q8TEY7 942 aa11.63□□□□□ -0.55
TUBD1-211ENST00000591548 MAML1Q92585 1016 aa11.63□□□□□ -0.55
TUBD1-211ENST00000591548 ARHGEF2Q92974 986 aaKnown RBP11.63□□□□□ -0.55
TUBD1-211ENST00000591548 FATE1Q969F0 183 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms