RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 LCP1P13796 627 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 BMP6P22004 513 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 ACSL1P33121 698 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 HNF1BP35680 557 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 ZNF165P49910 485 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 RPS14P62263 151 aaKnown RBP9.78□□□□□ -0.84
BRCA1-226ENST00000591534 RACK1P63244 317 aaKnown RBP9.78□□□□□ -0.84
BRCA1-226ENST00000591534 PKDCCQ504Y2 493 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 COBLL1Q53SF7 1204 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 ZNF658Q5TYW1 1059 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-226ENST00000591534 RNF219Q5W0B1 726 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-226ENST00000591534 TMEM215Q68D42 235 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 KIAA0907Q7Z7F0 614 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-226ENST00000591534 ADIPOR2Q86V24 386 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 MFN1Q8IWA4 741 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 FAM114A1Q8IWE2 563 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 HJURPQ8NCD3 748 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-226ENST00000591534 BAHD1Q8TBE0 780 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-226ENST00000591534 CYB5D2Q8WUJ1 264 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 BIRC7Q96CA5 298 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 OMDQ99983 421 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 C6orf106Q9H6K1 298 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-226ENST00000591534 PRSS16Q9NQE7 514 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 FTSJ1Q9UET6 329 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 ARMCX3Q9UH62 379 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-226ENST00000591534 SFMBT1Q9UHJ3 866 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 CLEC4EQ9ULY5 219 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.78□□□□□ -0.84
BRCA1-226ENST00000591534 COQ4Q9Y3A0 265 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 SNX11Q9Y5W9 270 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 AKAP13Q12802 2813 aa9.78□□□□□ -0.84
BRCA1-226ENST00000591534 DSPP15924 2871 aaKnown RBP9.77□□□□□ -0.84
BRCA1-226ENST00000591534 PCDH15Q96QU1 1955 aa9.77□□□□□ -0.84
BRCA1-226ENST00000591534 TARSL2A2RTX5 802 aaKnown RBP9.77□□□□□ -0.85
BRCA1-226ENST00000591534 YJEFN3A6XGL0 299 aa9.77□□□□□ -0.85
BRCA1-226ENST00000591534 E7ENQ6 273 aa9.77□□□□□ -0.85
BRCA1-226ENST00000591534 ACSL4O60488 711 aa9.77□□□□□ -0.85
BRCA1-226ENST00000591534 C1SP09871 688 aa9.77□□□□□ -0.85
BRCA1-226ENST00000591534 ATXN1LP0C7T5 689 aaKnown RBP9.77□□□□□ -0.85
BRCA1-226ENST00000591534 ABCB4P21439 1286 aa9.77□□□□□ -0.85
BRCA1-226ENST00000591534 NNMTP40261 264 aa9.77□□□□□ -0.85
BRCA1-226ENST00000591534 ARRB1P49407 418 aaPredicted RBP9.77□□□□□ -0.85
BRCA1-226ENST00000591534 TBX4P57082 545 aa9.77□□□□□ -0.85
BRCA1-226ENST00000591534 DAOAP59103 153 aa9.77□□□□□ -0.85
BRCA1-226ENST00000591534 LRRC63Q05C16 580 aa9.77□□□□□ -0.85
BRCA1-226ENST00000591534 CDH18Q13634 790 aa9.77□□□□□ -0.85
BRCA1-226ENST00000591534 PIK3R6Q5UE93 754 aa9.77□□□□□ -0.85
BRCA1-226ENST00000591534 KIAA0895LQ68EN5 471 aa9.77□□□□□ -0.85
BRCA1-226ENST00000591534 MSANTD2Q6P1R3 559 aa9.77□□□□□ -0.85
BRCA1-226ENST00000591534 C19orf48Q6RUI8 117 aa9.77□□□□□ -0.85
BRCA1-226ENST00000591534 LCLAT1Q6UWP7 414 aa9.77□□□□□ -0.85
BRCA1-226ENST00000591534 PDZD3Q86UT5 571 aa9.77□□□□□ -0.85
BRCA1-226ENST00000591534 TMPRSS12Q86WS5 348 aa9.77□□□□□ -0.85
BRCA1-226ENST00000591534 TREML1Q86YW5 311 aa9.77□□□□□ -0.85
BRCA1-226ENST00000591534 FIBINQ8TAL6 211 aa9.77□□□□□ -0.85
BRCA1-226ENST00000591534 UBA3Q8TBC4 463 aa9.77□□□□□ -0.85
BRCA1-226ENST00000591534 P2RY11Q96G91 374 aa9.77□□□□□ -0.85
BRCA1-226ENST00000591534 DHTKD1Q96HY7 919 aaPredicted RBP9.77□□□□□ -0.85
BRCA1-226ENST00000591534 HSH2DQ96JZ2 352 aa9.77□□□□□ -0.85
BRCA1-226ENST00000591534 HSFY1Q96LI6 401 aa9.77□□□□□ -0.85
BRCA1-226ENST00000591534 SERPINB11Q96P15 392 aa9.77□□□□□ -0.85
BRCA1-226ENST00000591534 PPP1R9BQ96SB3 815 aa9.77□□□□□ -0.85
BRCA1-226ENST00000591534 RSPH9Q9H1X1 276 aaPredicted RBP9.77□□□□□ -0.85
BRCA1-226ENST00000591534 PABPC3Q9H361 631 aaKnown RBP9.77□□□□□ -0.85
BRCA1-226ENST00000591534 FBXL12Q9NXK8 326 aa9.77□□□□□ -0.85
BRCA1-226ENST00000591534 CEP83Q9Y592 693 aa9.77□□□□□ -0.85
BRCA1-226ENST00000591534 CACNA1EQ15878 2313 aa9.77□□□□□ -0.85
BRCA1-226ENST00000591534 MYO18AQ92614 2054 aaKnown RBP9.76□□□□□ -0.85
BRCA1-226ENST00000591534 PKD1L2Q7Z442 2459 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 PI4KAP42356 2102 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 A0A1W2PPC4 97 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 FAM47DPA6NHR8 397 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 O00370 1275 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 VILLO15195 856 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 PAPSS1O43252 624 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-226ENST00000591534 MAGEC1O60732 1142 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 LTFP02788 710 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 ITGAVP06756 1048 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 SRPRAP08240 638 aaKnown RBP9.76□□□□□ -0.85
BRCA1-226ENST00000591534 CTSKP43235 329 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 OXCT1P55809 520 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 BNC1Q01954 994 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 SMAD1Q15797 465 aaKnown RBP9.76□□□□□ -0.85
BRCA1-226ENST00000591534 CNGA2Q16280 664 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 TPD52L1Q16890 204 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-226ENST00000591534 HNRNPA1L2Q32P51 320 aaKnown RBP9.76□□□□□ -0.85
BRCA1-226ENST00000591534 CBWD6Q4V339 395 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 CBWD3Q5JTY5 395 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 CBWD5Q5RIA9 395 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 ANKRD40Q6AI12 368 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 ALKBH2Q6NS38 261 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 TMEM270Q6UE05 265 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 OXR1Q8N573 874 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 OR2T34Q8NGX1 318 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 MDM1Q8TC05 714 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 HNRNPLLQ8WVV9 542 aaKnown RBP9.76□□□□□ -0.85
BRCA1-226ENST00000591534 NDRG1Q92597 394 aaKnown RBP9.76□□□□□ -0.85
BRCA1-226ENST00000591534 TTC17Q96AE7 1141 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 NT5C1BQ96P26 610 aa9.76□□□□□ -0.85
BRCA1-226ENST00000591534 GDF3Q9NR23 364 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms