RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 DMTF1Q9Y222 760 aa17.9■□□□□ 0.46
RETREG3-210ENST00000590541 CA5BQ9Y2D0 317 aa17.9■□□□□ 0.46
RETREG3-210ENST00000590541 SSUH2Q9Y2M2 353 aa17.9■□□□□ 0.46
RETREG3-210ENST00000590541 PMM2O15305 246 aa17.89■□□□□ 0.45
RETREG3-210ENST00000590541 KLK10O43240 276 aa17.89■□□□□ 0.45
RETREG3-210ENST00000590541 PLRG1O43660 514 aaKnown RBP17.89■□□□□ 0.45
RETREG3-210ENST00000590541 OPA1O60313 960 aa17.89■□□□□ 0.45
RETREG3-210ENST00000590541 RTN2O75298 545 aa17.89■□□□□ 0.45
RETREG3-210ENST00000590541 USP12O75317 370 aa17.89■□□□□ 0.45
RETREG3-210ENST00000590541 LUC7L3O95232 432 aaKnown RBP17.89■□□□□ 0.45
RETREG3-210ENST00000590541 GIMD1P0DJR0 217 aa17.89■□□□□ 0.45
RETREG3-210ENST00000590541 VAV1P15498 845 aa17.89■□□□□ 0.45
RETREG3-210ENST00000590541 DGKAP23743 735 aa17.89■□□□□ 0.45
RETREG3-210ENST00000590541 LSSP48449 732 aa17.89■□□□□ 0.45
RETREG3-210ENST00000590541 STK19P49842 368 aaPredicted RBP17.89■□□□□ 0.45
RETREG3-210ENST00000590541 PMS1P54277 932 aaKnown RBP17.89■□□□□ 0.45
RETREG3-210ENST00000590541 ELAVL3Q14576 367 aaKnown RBP17.89■□□□□ 0.45
RETREG3-210ENST00000590541 STAT4Q14765 748 aa17.89■□□□□ 0.45
RETREG3-210ENST00000590541 SGO2Q562F6 1265 aa17.89■□□□□ 0.45
RETREG3-210ENST00000590541 MS4A13Q5J8X5 152 aa17.89■□□□□ 0.45
RETREG3-210ENST00000590541 ERCC4Q92889 916 aaPredicted RBP17.89■□□□□ 0.45
RETREG3-210ENST00000590541 FCRL2Q96LA5 508 aaPredicted RBP17.89■□□□□ 0.45
RETREG3-210ENST00000590541 NUCKS1Q9H1E3 243 aaKnown RBP17.89■□□□□ 0.45
RETREG3-210ENST00000590541 KDM4CQ9H3R0 1056 aa17.89■□□□□ 0.45
RETREG3-210ENST00000590541 ASCL3Q9NQ33 180 aa17.89■□□□□ 0.45
RETREG3-210ENST00000590541 A0A1B0GVM2 712 aa17.88■□□□□ 0.45
RETREG3-210ENST00000590541 TYW5A2RUC4 315 aaKnown RBP17.88■□□□□ 0.45
RETREG3-210ENST00000590541 WISP1O95388 367 aa17.88■□□□□ 0.45
RETREG3-210ENST00000590541 NUDT1P36639 197 aa17.88■□□□□ 0.45
RETREG3-210ENST00000590541 VAC14Q08AM6 782 aa17.88■□□□□ 0.45
RETREG3-210ENST00000590541 CETN1Q12798 172 aa17.88■□□□□ 0.45
RETREG3-210ENST00000590541 DCAF6Q58WW2 860 aa17.88■□□□□ 0.45
RETREG3-210ENST00000590541 TMC6Q7Z403 805 aa17.88■□□□□ 0.45
RETREG3-210ENST00000590541 TRIM69Q86WT6 500 aa17.88■□□□□ 0.45
RETREG3-210ENST00000590541 SLC35C1Q96A29 364 aa17.88■□□□□ 0.45
RETREG3-210ENST00000590541 DEPDC7Q96QD5 511 aa17.88■□□□□ 0.45
RETREG3-210ENST00000590541 DDX50Q9BQ39 737 aaKnown RBP17.88■□□□□ 0.45
RETREG3-210ENST00000590541 DPH1Q9BZG8 443 aa17.88■□□□□ 0.45
RETREG3-210ENST00000590541 CAAP1Q9H8G2 361 aa17.88■□□□□ 0.45
RETREG3-210ENST00000590541 POLR1BQ9H9Y6 1135 aa17.88■□□□□ 0.45
RETREG3-210ENST00000590541 SARDHQ9UL12 918 aa17.88■□□□□ 0.45
RETREG3-210ENST00000590541 CEP83Q9Y592 693 aa17.88■□□□□ 0.45
RETREG3-210ENST00000590541 TRIM49BA6NDI0 452 aa17.87■□□□□ 0.45
RETREG3-210ENST00000590541 O00370 1275 aa17.87■□□□□ 0.45
RETREG3-210ENST00000590541 PIK3R2O00459 728 aa17.87■□□□□ 0.45
RETREG3-210ENST00000590541 SLC7A4O43246 635 aa17.87■□□□□ 0.45
RETREG3-210ENST00000590541 CSO75390 466 aaKnown RBP17.87■□□□□ 0.45
RETREG3-210ENST00000590541 MOCS3O95396 460 aa17.87■□□□□ 0.45
RETREG3-210ENST00000590541 GNA14O95837 355 aa17.87■□□□□ 0.45
RETREG3-210ENST00000590541 SETSIPP0DME0 302 aa17.87■□□□□ 0.45
RETREG3-210ENST00000590541 CKMT1AP12532 417 aa17.87■□□□□ 0.45
RETREG3-210ENST00000590541 KRT10P13645 584 aa17.87■□□□□ 0.45
RETREG3-210ENST00000590541 CD19P15391 556 aa17.87■□□□□ 0.45
RETREG3-210ENST00000590541 TBXAS1P24557 533 aaPredicted RBP17.87■□□□□ 0.45
RETREG3-210ENST00000590541 RGS7P49802 495 aa17.87■□□□□ 0.45
RETREG3-210ENST00000590541 UBE2HP62256 183 aa17.87■□□□□ 0.45
RETREG3-210ENST00000590541 MORC3Q14149 939 aa17.87■□□□□ 0.45
RETREG3-210ENST00000590541 CBWD6Q4V339 395 aa17.87■□□□□ 0.45
RETREG3-210ENST00000590541 CBWD3Q5JTY5 395 aa17.87■□□□□ 0.45
RETREG3-210ENST00000590541 CBWD5Q5RIA9 395 aa17.87■□□□□ 0.45
RETREG3-210ENST00000590541 AGBL4Q5VU57 503 aa17.87■□□□□ 0.45
RETREG3-210ENST00000590541 RNF219Q5W0B1 726 aaPredicted RBP17.87■□□□□ 0.45
RETREG3-210ENST00000590541 CCDC117Q8IWD4 279 aaPredicted RBP17.87■□□□□ 0.45
RETREG3-210ENST00000590541 CLEC4CQ8WTT0 213 aa17.87■□□□□ 0.45
RETREG3-210ENST00000590541 IRGQQ8WZA9 623 aa17.87■□□□□ 0.45
RETREG3-210ENST00000590541 MED8Q96G25 268 aa17.87■□□□□ 0.45
RETREG3-210ENST00000590541 KLHDC7BQ96G42 594 aa17.87■□□□□ 0.45
RETREG3-210ENST00000590541 VCPIP1Q96JH7 1222 aa17.87■□□□□ 0.45
RETREG3-210ENST00000590541 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.87■□□□□ 0.45
RETREG3-210ENST00000590541 CHMP5Q9NZZ3 219 aa17.87■□□□□ 0.45
RETREG3-210ENST00000590541 DOCK9Q9BZ29 2069 aa17.87■□□□□ 0.45
RETREG3-210ENST00000590541 HECTD1Q9ULT8 2610 aa17.86■□□□□ 0.45
RETREG3-210ENST00000590541 LY6G6EA0A0G2JKS1 128 aa17.86■□□□□ 0.45
RETREG3-210ENST00000590541 PRAMEF26H0Y7S4 382 aa17.86■□□□□ 0.45
RETREG3-210ENST00000590541 P4HA2O15460 535 aa17.86■□□□□ 0.45
RETREG3-210ENST00000590541 FFAR2O15552 330 aa17.86■□□□□ 0.45
RETREG3-210ENST00000590541 SLC28A2O43868 658 aa17.86■□□□□ 0.45
RETREG3-210ENST00000590541 LTFP02788 710 aa17.86■□□□□ 0.45
RETREG3-210ENST00000590541 FYNP06241 537 aa17.86■□□□□ 0.45
RETREG3-210ENST00000590541 VDRP11473 427 aa17.86■□□□□ 0.45
RETREG3-210ENST00000590541 MYF5P13349 255 aa17.86■□□□□ 0.45
RETREG3-210ENST00000590541 NUMBP49757 651 aa17.86■□□□□ 0.45
RETREG3-210ENST00000590541 KCNMA1Q12791 1236 aa17.86■□□□□ 0.45
RETREG3-210ENST00000590541 POM121L1PQ3SYA9 428 aa17.86■□□□□ 0.45
RETREG3-210ENST00000590541 CCDC40Q4G0X9 1142 aa17.86■□□□□ 0.45
RETREG3-210ENST00000590541 TTI2Q6NXR4 508 aa17.86■□□□□ 0.45
RETREG3-210ENST00000590541 PMF1Q6P1K2 205 aa17.86■□□□□ 0.45
RETREG3-210ENST00000590541 TMEM145Q8NBT3 493 aa17.86■□□□□ 0.45
RETREG3-210ENST00000590541 FRS2Q8WU20 508 aa17.86■□□□□ 0.45
RETREG3-210ENST00000590541 SLC35F5Q8WV83 523 aa17.86■□□□□ 0.45
RETREG3-210ENST00000590541 SLC39A13Q96H72 371 aa17.86■□□□□ 0.45
RETREG3-210ENST00000590541 SPAG5Q96R06 1193 aa17.86■□□□□ 0.45
RETREG3-210ENST00000590541 XPO7Q9UIA9 1087 aaKnown RBP17.86■□□□□ 0.45
RETREG3-210ENST00000590541 KIAA1257Q9ULG3 409 aa17.86■□□□□ 0.45
RETREG3-210ENST00000590541 U3KQA8 63 aa17.86■□□□□ 0.45
RETREG3-210ENST00000590541 A0A1W2PNU3 283 aaPredicted RBP17.85■□□□□ 0.45
RETREG3-210ENST00000590541 PPP1R3GB7ZBB8 358 aa17.85■□□□□ 0.45
RETREG3-210ENST00000590541 GADD45BO75293 160 aaPredicted RBP17.85■□□□□ 0.45
RETREG3-210ENST00000590541 FGFR1OPO95684 399 aaKnown RBP17.85■□□□□ 0.45
RETREG3-210ENST00000590541 THEGLP0DJG4 465 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms