RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 BBS12Q6ZW61 710 aa12.36□□□□□ -0.43
APOC1-206ENST00000590334 ADIPOR2Q86V24 386 aa12.36□□□□□ -0.43
APOC1-206ENST00000590334 RFX6Q8HWS3 928 aa12.36□□□□□ -0.43
APOC1-206ENST00000590334 SIX5Q8N196 739 aa12.36□□□□□ -0.43
APOC1-206ENST00000590334 EZH1Q92800 747 aaPredicted RBP12.36□□□□□ -0.43
APOC1-206ENST00000590334 ARHGEF2Q92974 986 aaKnown RBP12.36□□□□□ -0.43
APOC1-206ENST00000590334 TTC17Q96AE7 1141 aa12.36□□□□□ -0.43
APOC1-206ENST00000590334 PSMB7Q99436 277 aa12.36□□□□□ -0.43
APOC1-206ENST00000590334 HERPUD2Q9BSE4 406 aa12.36□□□□□ -0.43
APOC1-206ENST00000590334 MAK16Q9BXY0 300 aaKnown RBP12.36□□□□□ -0.43
APOC1-206ENST00000590334 SNX12Q9UMY4 172 aa12.36□□□□□ -0.43
APOC1-206ENST00000590334 STARD13Q9Y3M8 1113 aa12.36□□□□□ -0.43
APOC1-206ENST00000590334 MFHAS1Q9Y4C4 1052 aa12.36□□□□□ -0.43
APOC1-206ENST00000590334 RAD54BQ9Y620 910 aa12.36□□□□□ -0.43
APOC1-206ENST00000590334 A0A0D9SEW6 157 aa12.35□□□□□ -0.43
APOC1-206ENST00000590334 KANSL1LA0AUZ9 987 aa12.35□□□□□ -0.43
APOC1-206ENST00000590334 RASA4BC9J798 803 aa12.35□□□□□ -0.43
APOC1-206ENST00000590334 PRRT4C9JH25 899 aa12.35□□□□□ -0.43
APOC1-206ENST00000590334 K7EQS6 105 aa12.35□□□□□ -0.43
APOC1-206ENST00000590334 APOL1O14791 398 aa12.35□□□□□ -0.43
APOC1-206ENST00000590334 RASA4O43374 803 aa12.35□□□□□ -0.43
APOC1-206ENST00000590334 MFSD11O43934 449 aa12.35□□□□□ -0.43
APOC1-206ENST00000590334 CST8O60676 142 aa12.35□□□□□ -0.43
APOC1-206ENST00000590334 TJP3O95049 919 aa12.35□□□□□ -0.43
APOC1-206ENST00000590334 TUBB4AP04350 444 aa12.35□□□□□ -0.43
APOC1-206ENST00000590334 TGM2P21980 687 aa12.35□□□□□ -0.43
APOC1-206ENST00000590334 NR2C2P49116 596 aa12.35□□□□□ -0.43
APOC1-206ENST00000590334 VASPP50552 380 aaPredicted RBP12.35□□□□□ -0.43
APOC1-206ENST00000590334 DNA2P51530 1060 aa12.35□□□□□ -0.43
APOC1-206ENST00000590334 GRSF1Q12849 480 aaKnown RBP eCLIP12.35□□□□□ -0.43
APOC1-206ENST00000590334 KLF1Q13351 362 aaPredicted RBP12.35□□□□□ -0.43
APOC1-206ENST00000590334 SERINC3Q13530 473 aa12.35□□□□□ -0.43
APOC1-206ENST00000590334 CCINQ13939 588 aa12.35□□□□□ -0.43
APOC1-206ENST00000590334 SEL1L2Q5TEA6 688 aa12.35□□□□□ -0.43
APOC1-206ENST00000590334 LRRC49Q8IUZ0 686 aa12.35□□□□□ -0.43
APOC1-206ENST00000590334 SFTPA1Q8IWL2 248 aa12.35□□□□□ -0.43
APOC1-206ENST00000590334 APCDD1Q8J025 514 aa12.35□□□□□ -0.43
APOC1-206ENST00000590334 DCAF4L2Q8NA75 395 aa12.35□□□□□ -0.43
APOC1-206ENST00000590334 KCNV2Q8TDN2 545 aa12.35□□□□□ -0.43
APOC1-206ENST00000590334 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.35□□□□□ -0.43
APOC1-206ENST00000590334 ACDQ96AP0 544 aa12.35□□□□□ -0.43
APOC1-206ENST00000590334 PBKQ96KB5 322 aa12.35□□□□□ -0.43
APOC1-206ENST00000590334 NELL2Q99435 816 aa12.35□□□□□ -0.43
APOC1-206ENST00000590334 NAPGQ99747 312 aaPredicted RBP12.35□□□□□ -0.43
APOC1-206ENST00000590334 OSBPL6Q9BZF3 934 aa12.35□□□□□ -0.43
APOC1-206ENST00000590334 SLC39A8Q9C0K1 460 aa12.35□□□□□ -0.43
APOC1-206ENST00000590334 MUC3BQ9H195 1237 aa12.35□□□□□ -0.43
APOC1-206ENST00000590334 DTLQ9NZJ0 730 aa12.35□□□□□ -0.43
APOC1-206ENST00000590334 MRPS17Q9Y2R5 130 aaKnown RBP12.35□□□□□ -0.43
APOC1-206ENST00000590334 CKAP5Q14008 2032 aa12.34□□□□□ -0.43
APOC1-206ENST00000590334 CTAGE9A4FU28 777 aa12.34□□□□□ -0.43
APOC1-206ENST00000590334 TBC1D3BA6NDS4 549 aa12.34□□□□□ -0.43
APOC1-206ENST00000590334 ARHGAP42A6NI28 874 aa12.34□□□□□ -0.43
APOC1-206ENST00000590334 NCAM2O15394 837 aa12.34□□□□□ -0.43
APOC1-206ENST00000590334 KDELR3O43731 214 aa12.34□□□□□ -0.43
APOC1-206ENST00000590334 ZMPSTE24O75844 475 aa12.34□□□□□ -0.43
APOC1-206ENST00000590334 EGFP01133 1207 aa12.34□□□□□ -0.43
APOC1-206ENST00000590334 ASLP04424 464 aa12.34□□□□□ -0.43
APOC1-206ENST00000590334 HNRNPLP14866 589 aaKnown RBP eCLIP12.34□□□□□ -0.43
APOC1-206ENST00000590334 POLR2EP19388 210 aaKnown RBP12.34□□□□□ -0.43
APOC1-206ENST00000590334 CD72P21854 359 aa12.34□□□□□ -0.43
APOC1-206ENST00000590334 ACVRL1P37023 503 aa12.34□□□□□ -0.43
APOC1-206ENST00000590334 PAPOLAP51003 745 aaKnown RBP12.34□□□□□ -0.43
APOC1-206ENST00000590334 GBE1Q04446 702 aa12.34□□□□□ -0.43
APOC1-206ENST00000590334 SULT2A1Q06520 285 aa12.34□□□□□ -0.43
APOC1-206ENST00000590334 GALNT2Q10471 571 aa12.34□□□□□ -0.43
APOC1-206ENST00000590334 SLC10A2Q12908 348 aaPredicted RBP12.34□□□□□ -0.43
APOC1-206ENST00000590334 FZD5Q13467 585 aa12.34□□□□□ -0.43
APOC1-206ENST00000590334 E2F5Q15329 346 aa12.34□□□□□ -0.43
APOC1-206ENST00000590334 FBXO43Q4G163 708 aa12.34□□□□□ -0.43
APOC1-206ENST00000590334 KAZNQ674X7 775 aa12.34□□□□□ -0.43
APOC1-206ENST00000590334 MBLAC2Q68D91 279 aa12.34□□□□□ -0.43
APOC1-206ENST00000590334 TRIM67Q6ZTA4 783 aa12.34□□□□□ -0.43
APOC1-206ENST00000590334 RASGEF1CQ8N431 466 aa12.34□□□□□ -0.43
APOC1-206ENST00000590334 OR7D4Q8NG98 312 aa12.34□□□□□ -0.43
APOC1-206ENST00000590334 HMCESQ96FZ2 354 aa12.34□□□□□ -0.43
APOC1-206ENST00000590334 CELF6Q96J87 481 aaKnown RBP12.34□□□□□ -0.43
APOC1-206ENST00000590334 OLFM3Q96PB7 478 aa12.34□□□□□ -0.43
APOC1-206ENST00000590334 OSBPL9Q96SU4 736 aa12.34□□□□□ -0.43
APOC1-206ENST00000590334 C2orf49Q9BVC5 232 aaPredicted RBP12.34□□□□□ -0.43
APOC1-206ENST00000590334 HEMGNQ9BXL5 484 aa12.34□□□□□ -0.43
APOC1-206ENST00000590334 LTB4R2Q9NPC1 389 aa12.34□□□□□ -0.43
APOC1-206ENST00000590334 ELOVL2Q9NXB9 296 aa12.34□□□□□ -0.43
APOC1-206ENST00000590334 VPS28Q9UK41 221 aa12.34□□□□□ -0.43
APOC1-206ENST00000590334 HCN2Q9UL51 889 aa12.34□□□□□ -0.43
APOC1-206ENST00000590334 TTC7AQ9ULT0 858 aaPredicted RBP12.34□□□□□ -0.43
APOC1-206ENST00000590334 ZSCAN5CA6NGD5 496 aaPredicted RBP12.33□□□□□ -0.44
APOC1-206ENST00000590334 APOC4-APOC2K7ER74 178 aa12.33□□□□□ -0.44
APOC1-206ENST00000590334 KIF2AO00139 706 aaPredicted RBP12.33□□□□□ -0.44
APOC1-206ENST00000590334 NPC1O15118 1278 aa12.33□□□□□ -0.44
APOC1-206ENST00000590334 APOC2P02655 101 aa12.33□□□□□ -0.44
APOC1-206ENST00000590334 ATP5BP06576 529 aaKnown RBP12.33□□□□□ -0.44
APOC1-206ENST00000590334 SRPRAP08240 638 aaKnown RBP12.33□□□□□ -0.44
APOC1-206ENST00000590334 DLDP09622 509 aaKnown RBP12.33□□□□□ -0.44
APOC1-206ENST00000590334 CHRNB1P11230 501 aa12.33□□□□□ -0.44
APOC1-206ENST00000590334 TCP1P17987 556 aaKnown RBP12.33□□□□□ -0.44
APOC1-206ENST00000590334 TARSP26639 723 aaKnown RBP12.33□□□□□ -0.44
APOC1-206ENST00000590334 CXCR5P32302 372 aa12.33□□□□□ -0.44
APOC1-206ENST00000590334 KIR2DL1P43626 348 aaPredicted RBP12.33□□□□□ -0.44
APOC1-206ENST00000590334 DYNLT1P63172 113 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms