RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 C2orf49Q9BVC5 232 aaPredicted RBP13.96□□□□□ -0.17
VMP1-210ENST00000589823 CIPCQ9C0C6 399 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 MFSD1Q9H3U5 465 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 FBRSL1Q9HCM7 1045 aaKnown RBP13.96□□□□□ -0.17
VMP1-210ENST00000589823 ATP13A1Q9HD20 1204 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 HPCAL4Q9UM19 191 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 MFHAS1Q9Y4C4 1052 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 DOCK4Q8N1I0 1966 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 A0A0D9SEW6 157 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 KANSL1LA0AUZ9 987 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 DFFAO00273 331 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 MFSD11O43934 449 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 EGFP01133 1207 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 ASLP04424 464 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 ATP5BP06576 529 aaKnown RBP13.95□□□□□ -0.18
VMP1-210ENST00000589823 TGM2P21980 687 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 CASQ1P31415 396 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 CXCR5P32302 372 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 SULT2A1Q06520 285 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 MESP2Q0VG99 397 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 UBXN2BQ14CS0 331 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 FUT11Q495W5 492 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 FBXO43Q4G163 708 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 FSTL4Q6MZW2 842 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 SYT10Q6XYQ8 523 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 BBS12Q6ZW61 710 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 BZW1Q7L1Q6 419 aaKnown RBP13.95□□□□□ -0.18
VMP1-210ENST00000589823 APCDD1Q8J025 514 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 NPWQ8N729 165 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 PLD5Q8N7P1 536 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 DCAF4L2Q8NA75 395 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 CCDC26Q8TAB7 109 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 ARHGEF2Q92974 986 aaKnown RBP13.95□□□□□ -0.18
VMP1-210ENST00000589823 HMCESQ96FZ2 354 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 SLC39A8Q9C0K1 460 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 KLC2Q9H0B6 622 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 NOL6Q9H6R4 1146 aaKnown RBP13.95□□□□□ -0.18
VMP1-210ENST00000589823 LRRC19Q9H756 370 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 TBC1D17Q9HA65 648 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 ELOVL2Q9NXB9 296 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 INTS6Q9UL03 887 aaKnown RBP13.95□□□□□ -0.18
VMP1-210ENST00000589823 SNX12Q9UMY4 172 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 HEY1Q9Y5J3 304 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 OR51B4Q9Y5P0 310 aa13.95□□□□□ -0.18
VMP1-210ENST00000589823 A0A0A0MRY4 1105 aa13.94□□□□□ -0.18
VMP1-210ENST00000589823 SHISA7A6NL88 538 aa13.94□□□□□ -0.18
VMP1-210ENST00000589823 PRRT4C9JH25 899 aa13.94□□□□□ -0.18
VMP1-210ENST00000589823 KIF2AO00139 706 aaPredicted RBP13.94□□□□□ -0.18
VMP1-210ENST00000589823 CBX4O00257 560 aa13.94□□□□□ -0.18
VMP1-210ENST00000589823 NCAM2O15394 837 aa13.94□□□□□ -0.18
VMP1-210ENST00000589823 CEP104O60308 925 aa13.94□□□□□ -0.18
VMP1-210ENST00000589823 TUBB4AP04350 444 aa13.94□□□□□ -0.18
VMP1-210ENST00000589823 TCP1P17987 556 aaKnown RBP13.94□□□□□ -0.18
VMP1-210ENST00000589823 MX2P20592 715 aa13.94□□□□□ -0.18
VMP1-210ENST00000589823 ACVRL1P37023 503 aa13.94□□□□□ -0.18
VMP1-210ENST00000589823 NR2C2P49116 596 aa13.94□□□□□ -0.18
VMP1-210ENST00000589823 NUMBP49757 651 aa13.94□□□□□ -0.18
VMP1-210ENST00000589823 PAPOLAP51003 745 aaKnown RBP13.94□□□□□ -0.18
VMP1-210ENST00000589823 GBE1Q04446 702 aa13.94□□□□□ -0.18
VMP1-210ENST00000589823 SERINC3Q13530 473 aa13.94□□□□□ -0.18
VMP1-210ENST00000589823 LRRC32Q14392 662 aa13.94□□□□□ -0.18
VMP1-210ENST00000589823 DGKKQ5KSL6 1271 aa13.94□□□□□ -0.18
VMP1-210ENST00000589823 AFMIDQ63HM1 303 aa13.94□□□□□ -0.18
VMP1-210ENST00000589823 TMEM215Q68D42 235 aa13.94□□□□□ -0.18
VMP1-210ENST00000589823 TRIM67Q6ZTA4 783 aa13.94□□□□□ -0.18
VMP1-210ENST00000589823 NYAP1Q6ZVC0 841 aa13.94□□□□□ -0.18
VMP1-210ENST00000589823 ADIPOR2Q86V24 386 aa13.94□□□□□ -0.18
VMP1-210ENST00000589823 LRRC49Q8IUZ0 686 aa13.94□□□□□ -0.18
VMP1-210ENST00000589823 ARHGAP12Q8IWW6 846 aa13.94□□□□□ -0.18
VMP1-210ENST00000589823 P3H4Q92791 437 aa13.94□□□□□ -0.18
VMP1-210ENST00000589823 TTC17Q96AE7 1141 aa13.94□□□□□ -0.18
VMP1-210ENST00000589823 ACDQ96AP0 544 aa13.94□□□□□ -0.18
VMP1-210ENST00000589823 ALG14Q96F25 216 aa13.94□□□□□ -0.18
VMP1-210ENST00000589823 OSBPL9Q96SU4 736 aa13.94□□□□□ -0.18
VMP1-210ENST00000589823 ACE2Q9BYF1 805 aaPredicted RBP13.94□□□□□ -0.18
VMP1-210ENST00000589823 LTB4R2Q9NPC1 389 aa13.94□□□□□ -0.18
VMP1-210ENST00000589823 SLC25A13Q9UJS0 675 aa13.94□□□□□ -0.18
VMP1-210ENST00000589823 RAD54BQ9Y620 910 aa13.94□□□□□ -0.18
VMP1-210ENST00000589823 KIAA1549LQ6ZVL6 1849 aa13.94□□□□□ -0.18
VMP1-210ENST00000589823 VCANP13611 3396 aa13.93□□□□□ -0.18
VMP1-210ENST00000589823 FAM170BA6NMN3 283 aa13.93□□□□□ -0.18
VMP1-210ENST00000589823 K7EQS6 105 aa13.93□□□□□ -0.18
VMP1-210ENST00000589823 APOC4-APOC2K7ER74 178 aa13.93□□□□□ -0.18
VMP1-210ENST00000589823 CES2O00748 559 aa13.93□□□□□ -0.18
VMP1-210ENST00000589823 KDELR3O43731 214 aa13.93□□□□□ -0.18
VMP1-210ENST00000589823 SLC34A2O95436 690 aa13.93□□□□□ -0.18
VMP1-210ENST00000589823 APOC2P02655 101 aa13.93□□□□□ -0.18
VMP1-210ENST00000589823 DLDP09622 509 aaKnown RBP13.93□□□□□ -0.18
VMP1-210ENST00000589823 TARSP26639 723 aaKnown RBP13.93□□□□□ -0.18
VMP1-210ENST00000589823 NNMTP40261 264 aa13.93□□□□□ -0.18
VMP1-210ENST00000589823 SEC13P55735 322 aa13.93□□□□□ -0.18
VMP1-210ENST00000589823 ST8SIA6P61647 398 aa13.93□□□□□ -0.18
VMP1-210ENST00000589823 ECT2LQ008S8 904 aa13.93□□□□□ -0.18
VMP1-210ENST00000589823 PAPD7Q5XG87 772 aaKnown RBP13.93□□□□□ -0.18
VMP1-210ENST00000589823 RETSATQ6NUM9 610 aa13.93□□□□□ -0.18
VMP1-210ENST00000589823 NPNTQ6UXI9 565 aa13.93□□□□□ -0.18
VMP1-210ENST00000589823 SFTPA1Q8IWL2 248 aa13.93□□□□□ -0.18
VMP1-210ENST00000589823 ATPAF2Q8N5M1 289 aa13.93□□□□□ -0.18
VMP1-210ENST00000589823 TTC13Q8NBP0 860 aa13.93□□□□□ -0.18
VMP1-210ENST00000589823 NETO2Q8NC67 525 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms