RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 ACBD5Q5T8D3 534 aaPredicted RBP10.69□□□□□ -0.7
SDF2-208ENST00000589788 TMEM215Q68D42 235 aa10.69□□□□□ -0.7
SDF2-208ENST00000589788 MBLAC2Q68D91 279 aa10.69□□□□□ -0.7
SDF2-208ENST00000589788 RNF43Q68DV7 783 aa10.69□□□□□ -0.7
SDF2-208ENST00000589788 TRNP1Q6NT89 227 aa10.69□□□□□ -0.7
SDF2-208ENST00000589788 C3orf20Q8ND61 904 aa10.69□□□□□ -0.7
SDF2-208ENST00000589788 WFDC5Q8TCV5 224 aa10.69□□□□□ -0.7
SDF2-208ENST00000589788 RHBDD1Q8TEB9 315 aa10.69□□□□□ -0.7
SDF2-208ENST00000589788 ERLEC1Q96DZ1 483 aa10.69□□□□□ -0.7
SDF2-208ENST00000589788 MYEOVQ96EZ4 313 aa10.69□□□□□ -0.7
SDF2-208ENST00000589788 PRMT1Q99873 361 aaKnown RBP10.69□□□□□ -0.7
SDF2-208ENST00000589788 ARHGEF38Q9NXL2 777 aa10.69□□□□□ -0.7
SDF2-208ENST00000589788 CALCOCO1Q9P1Z2 691 aa10.69□□□□□ -0.7
SDF2-208ENST00000589788 KIAA1522Q9P206 1035 aaPredicted RBP10.69□□□□□ -0.7
SDF2-208ENST00000589788 VANGL2Q9ULK5 521 aa10.69□□□□□ -0.7
SDF2-208ENST00000589788 INVSQ9Y283 1065 aa10.69□□□□□ -0.7
SDF2-208ENST00000589788 LUC7L2Q9Y383 392 aaKnown RBP10.69□□□□□ -0.7
SDF2-208ENST00000589788 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.69□□□□□ -0.7
SDF2-208ENST00000589788 RAD54BQ9Y620 910 aa10.69□□□□□ -0.7
SDF2-208ENST00000589788 HS3ST4Q9Y661 456 aa10.69□□□□□ -0.7
SDF2-208ENST00000589788 BZW2Q9Y6E2 419 aaKnown RBP10.69□□□□□ -0.7
SDF2-208ENST00000589788 SPAG17Q6Q759 2223 aa10.69□□□□□ -0.7
SDF2-208ENST00000589788 ITIH6Q6UXX5 1313 aa10.69□□□□□ -0.7
SDF2-208ENST00000589788 FAM186AA6NE01 2351 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 RIF1Q5UIP0 2472 aaKnown RBP10.68□□□□□ -0.7
SDF2-208ENST00000589788 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.68□□□□□ -0.7
SDF2-208ENST00000589788 A0A1B0GVM2 712 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 A0A1W2PQF6 199 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 TCAF2A6NFQ2 919 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 C2CD4BA6NLJ0 364 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 SIGLEC16A6NMB1 481 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 WASH3PC4AMC7 463 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 GJB6O95452 261 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 DLDP09622 509 aaKnown RBP10.68□□□□□ -0.7
SDF2-208ENST00000589788 SKILP12757 684 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 DESP17661 470 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 GABRG2P18507 467 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 GPD1P21695 349 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 IL12RB1P42701 662 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 PTPN9P43378 593 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 ATXN1P54253 815 aaKnown RBP10.68□□□□□ -0.7
SDF2-208ENST00000589788 OXCT1P55809 520 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 LMAN2Q12907 356 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 ZNF177Q13360 481 aaPredicted RBP10.68□□□□□ -0.7
SDF2-208ENST00000589788 BYSLQ13895 437 aaKnown RBP10.68□□□□□ -0.7
SDF2-208ENST00000589788 ELF2Q15723 593 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 C15orf59Q2T9L4 293 aaPredicted RBP10.68□□□□□ -0.7
SDF2-208ENST00000589788 ARL13BQ3SXY8 428 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 FUT11Q495W5 492 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 E4F1Q66K89 784 aaPredicted RBP10.68□□□□□ -0.7
SDF2-208ENST00000589788 KIAA1211LQ6NV74 962 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 FBXL22Q6P050 247 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 DCUN1D2Q6PH85 259 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 LRRC31Q6UY01 552 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 ZNF571Q7Z3V5 609 aaPredicted RBP10.68□□□□□ -0.7
SDF2-208ENST00000589788 KIAA0907Q7Z7F0 614 aaPredicted RBP10.68□□□□□ -0.7
SDF2-208ENST00000589788 ADIPOR2Q86V24 386 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 KBTBD6Q86V97 674 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 C11orf74Q86VG3 221 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 VPS36Q86VN1 386 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 CIR1Q86X95 450 aaPredicted RBP10.68□□□□□ -0.7
SDF2-208ENST00000589788 FAM131BQ86XD5 332 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 VSTM4Q8IW00 320 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 MCOLN2Q8IZK6 566 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 CCAR2Q8N163 923 aaKnown RBP10.68□□□□□ -0.7
SDF2-208ENST00000589788 JOSD2Q8TAC2 188 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 CYB5D2Q8WUJ1 264 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 SYN2Q92777 582 aaPredicted RBP10.68□□□□□ -0.7
SDF2-208ENST00000589788 VCPIP1Q96JH7 1222 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 PDLIM2Q96JY6 352 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 SPACA7Q96KW9 195 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 SYT11Q9BT88 431 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 TAS2R14Q9NYV8 317 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 CAPN11Q9UMQ6 739 aa10.68□□□□□ -0.7
SDF2-208ENST00000589788 PTPRZ1P23471 2315 aaPredicted RBP10.68□□□□□ -0.7
SDF2-208ENST00000589788 CLDN11O75508 207 aa10.67□□□□□ -0.7
SDF2-208ENST00000589788 ENDOD1O94919 500 aa10.67□□□□□ -0.7
SDF2-208ENST00000589788 ASLP04424 464 aa10.67□□□□□ -0.7
SDF2-208ENST00000589788 SERPING1P05155 500 aa10.67□□□□□ -0.7
SDF2-208ENST00000589788 EPHX1P07099 455 aa10.67□□□□□ -0.7
SDF2-208ENST00000589788 TPM1P09493 284 aa10.67□□□□□ -0.7
SDF2-208ENST00000589788 GZMAP12544 262 aa10.67□□□□□ -0.7
SDF2-208ENST00000589788 RRM1P23921 792 aa10.67□□□□□ -0.7
SDF2-208ENST00000589788 PRKCHP24723 683 aa10.67□□□□□ -0.7
SDF2-208ENST00000589788 RFC1P35251 1148 aaPredicted RBP10.67□□□□□ -0.7
SDF2-208ENST00000589788 CSKP41240 450 aa10.67□□□□□ -0.7
SDF2-208ENST00000589788 CTSOP43234 321 aaPredicted RBP10.67□□□□□ -0.7
SDF2-208ENST00000589788 ST8SIA6P61647 398 aa10.67□□□□□ -0.7
SDF2-208ENST00000589788 SLC12A1Q13621 1099 aa10.67□□□□□ -0.7
SDF2-208ENST00000589788 ENPP2Q13822 863 aa10.67□□□□□ -0.7
SDF2-208ENST00000589788 CCDC14Q49A88 953 aa10.67□□□□□ -0.7
SDF2-208ENST00000589788 FSCBQ5H9T9 825 aa10.67□□□□□ -0.7
SDF2-208ENST00000589788 PITRM1Q5JRX3 1037 aa10.67□□□□□ -0.7
SDF2-208ENST00000589788 RNF219Q5W0B1 726 aaPredicted RBP10.67□□□□□ -0.7
SDF2-208ENST00000589788 WDR59Q6PJI9 974 aa10.67□□□□□ -0.7
SDF2-208ENST00000589788 STRADAQ7RTN6 431 aa10.67□□□□□ -0.7
SDF2-208ENST00000589788 FAM172AQ8WUF8 416 aa10.67□□□□□ -0.7
SDF2-208ENST00000589788 RLN3Q8WXF3 142 aa10.67□□□□□ -0.7
SDF2-208ENST00000589788 IGSF8Q969P0 613 aa10.67□□□□□ -0.7
SDF2-208ENST00000589788 C1orf74Q96LT6 269 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms