RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 FAM72DQ6L9T8 149 aa20.69■□□□□ 0.9
ATG4D-208ENST00000588667 CYP4V2Q6ZWL3 525 aaPredicted RBP20.69■□□□□ 0.9
ATG4D-208ENST00000588667 ZNF572Q7Z3I7 529 aaPredicted RBP20.69■□□□□ 0.9
ATG4D-208ENST00000588667 FAM72BQ86X60 149 aa20.69■□□□□ 0.9
ATG4D-208ENST00000588667 PSTKQ8IV42 348 aaKnown RBP20.69■□□□□ 0.9
ATG4D-208ENST00000588667 MAML2Q8IZL2 1156 aaPredicted RBP20.69■□□□□ 0.9
ATG4D-208ENST00000588667 TBC1D31Q96DN5 1066 aa20.69■□□□□ 0.9
ATG4D-208ENST00000588667 EPAS1Q99814 870 aa20.69■□□□□ 0.9
ATG4D-208ENST00000588667 SNRNP25Q9BV90 132 aaKnown RBP20.69■□□□□ 0.9
ATG4D-208ENST00000588667 RETREG1Q9H6L5 497 aa20.69■□□□□ 0.9
ATG4D-208ENST00000588667 C2orf42Q9NWW7 574 aa20.69■□□□□ 0.9
ATG4D-208ENST00000588667 MPP6Q9NZW5 540 aa20.69■□□□□ 0.9
ATG4D-208ENST00000588667 FBXO4Q9UKT5 387 aa20.69■□□□□ 0.9
ATG4D-208ENST00000588667 NEU3Q9UQ49 428 aa20.69■□□□□ 0.9
ATG4D-208ENST00000588667 TBC1D30Q9Y2I9 924 aa20.69■□□□□ 0.9
ATG4D-208ENST00000588667 PCDHA3Q9Y5H8 950 aa20.69■□□□□ 0.9
ATG4D-208ENST00000588667 MUC22E2RYF6 1773 aaPredicted RBP20.69■□□□□ 0.9
ATG4D-208ENST00000588667 CEP104O60308 925 aa20.68■□□□□ 0.9
ATG4D-208ENST00000588667 SEMA3BQ13214 749 aa20.68■□□□□ 0.9
ATG4D-208ENST00000588667 EOGTQ5NDL2 527 aa20.68■□□□□ 0.9
ATG4D-208ENST00000588667 DAB2IPQ5VWQ8 1189 aa20.68■□□□□ 0.9
ATG4D-208ENST00000588667 MBLAC2Q68D91 279 aa20.68■□□□□ 0.9
ATG4D-208ENST00000588667 SETD3Q86TU7 594 aaPredicted RBP20.68■□□□□ 0.9
ATG4D-208ENST00000588667 PYROXD2Q8N2H3 581 aa20.68■□□□□ 0.9
ATG4D-208ENST00000588667 CCDC33Q8N5R6 958 aa20.68■□□□□ 0.9
ATG4D-208ENST00000588667 TXNDC5Q8NBS9 432 aaKnown RBP20.68■□□□□ 0.9
ATG4D-208ENST00000588667 LRRN4CLQ8ND94 238 aa20.68■□□□□ 0.9
ATG4D-208ENST00000588667 ACTRT1Q8TDG2 376 aa20.68■□□□□ 0.9
ATG4D-208ENST00000588667 UBXN4Q92575 508 aa20.68■□□□□ 0.9
ATG4D-208ENST00000588667 MAGEB5Q9BZ81 275 aa20.68■□□□□ 0.9
ATG4D-208ENST00000588667 ZDHHC4Q9NPG8 344 aa20.68■□□□□ 0.9
ATG4D-208ENST00000588667 INTS6Q9UL03 887 aaKnown RBP20.68■□□□□ 0.9
ATG4D-208ENST00000588667 NTSR1P30989 418 aa20.67■□□□□ 0.9
ATG4D-208ENST00000588667 HOXC13P31276 330 aa20.67■□□□□ 0.9
ATG4D-208ENST00000588667 RWDD2BP57060 319 aa20.67■□□□□ 0.9
ATG4D-208ENST00000588667 CKAP5Q14008 2032 aa20.67■□□□□ 0.9
ATG4D-208ENST00000588667 PLEKHG6Q3KR16 790 aa20.67■□□□□ 0.9
ATG4D-208ENST00000588667 PITRM1Q5JRX3 1037 aa20.67■□□□□ 0.9
ATG4D-208ENST00000588667 RWDD4Q6NW29 188 aaKnown RBP20.67■□□□□ 0.9
ATG4D-208ENST00000588667 TFAP2DQ7Z6R9 452 aa20.67■□□□□ 0.9
ATG4D-208ENST00000588667 RHOT1Q8IXI2 618 aa20.67■□□□□ 0.9
ATG4D-208ENST00000588667 CHPFQ8IZ52 775 aa20.67■□□□□ 0.9
ATG4D-208ENST00000588667 PRSS33Q8NF86 280 aa20.67■□□□□ 0.9
ATG4D-208ENST00000588667 KRT35Q92764 455 aa20.67■□□□□ 0.9
ATG4D-208ENST00000588667 GPATCH2LQ9NWQ4 482 aa20.67■□□□□ 0.9
ATG4D-208ENST00000588667 THAP10Q9P2Z0 257 aaPredicted RBP20.67■□□□□ 0.9
ATG4D-208ENST00000588667 ZNF212Q9UDV6 495 aa20.67■□□□□ 0.9
ATG4D-208ENST00000588667 SGK1O00141 431 aa20.67■□□□□ 0.9
ATG4D-208ENST00000588667 PDE2AO00408 941 aaPredicted RBP20.67■□□□□ 0.9
ATG4D-208ENST00000588667 PSTPIP1O43586 416 aa20.67■□□□□ 0.9
ATG4D-208ENST00000588667 ATP5BP06576 529 aaKnown RBP20.67■□□□□ 0.9
ATG4D-208ENST00000588667 RHOQP17081 205 aa20.67■□□□□ 0.9
ATG4D-208ENST00000588667 POLR2EP19388 210 aaKnown RBP20.67■□□□□ 0.9
ATG4D-208ENST00000588667 IL1R2P27930 398 aa20.67■□□□□ 0.9
ATG4D-208ENST00000588667 HTR7P34969 479 aa20.67■□□□□ 0.9
ATG4D-208ENST00000588667 CSKP41240 450 aa20.67■□□□□ 0.9
ATG4D-208ENST00000588667 PEX5P50542 639 aa20.67■□□□□ 0.9
ATG4D-208ENST00000588667 PLK1P53350 603 aa20.67■□□□□ 0.9
ATG4D-208ENST00000588667 C6orf118Q5T5N4 469 aa20.67■□□□□ 0.9
ATG4D-208ENST00000588667 RASGEF1CQ8N431 466 aa20.67■□□□□ 0.9
ATG4D-208ENST00000588667 ALG3Q92685 438 aa20.67■□□□□ 0.9
ATG4D-208ENST00000588667 TTC17Q96AE7 1141 aa20.67■□□□□ 0.9
ATG4D-208ENST00000588667 MS4A14Q96JA4 679 aa20.67■□□□□ 0.9
ATG4D-208ENST00000588667 DHX35Q9H5Z1 703 aaKnown RBP20.67■□□□□ 0.9
ATG4D-208ENST00000588667 TTC7AQ9ULT0 858 aaPredicted RBP20.67■□□□□ 0.9
ATG4D-208ENST00000588667 SLC8A2Q9UPR5 921 aa20.67■□□□□ 0.9
ATG4D-208ENST00000588667 FANCMQ8IYD8 2048 aa20.66■□□□□ 0.9
ATG4D-208ENST00000588667 PGRMC1O00264 195 aaKnown RBP20.66■□□□□ 0.9
ATG4D-208ENST00000588667 CREB3O43889 395 aa20.66■□□□□ 0.9
ATG4D-208ENST00000588667 ADAM23O75077 832 aa20.66■□□□□ 0.9
ATG4D-208ENST00000588667 ASLP04424 464 aa20.66■□□□□ 0.9
ATG4D-208ENST00000588667 RHOCP08134 193 aa20.66■□□□□ 0.9
ATG4D-208ENST00000588667 DLDP09622 509 aaKnown RBP20.66■□□□□ 0.9
ATG4D-208ENST00000588667 TCF4P15884 667 aa20.66■□□□□ 0.9
ATG4D-208ENST00000588667 OR1E1P30953 314 aa20.66■□□□□ 0.9
ATG4D-208ENST00000588667 SLC25A11Q02978 314 aaKnown RBP20.66■□□□□ 0.9
ATG4D-208ENST00000588667 TCF15Q12870 199 aa20.66■□□□□ 0.9
ATG4D-208ENST00000588667 ZNF528Q3MIS6 628 aa20.66■□□□□ 0.9
ATG4D-208ENST00000588667 BOLA3Q53S33 107 aa20.66■□□□□ 0.9
ATG4D-208ENST00000588667 SDE2Q6IQ49 451 aa20.66■□□□□ 0.9
ATG4D-208ENST00000588667 CPNE8Q86YQ8 564 aa20.66■□□□□ 0.9
ATG4D-208ENST00000588667 OR52K2Q8NGK3 314 aa20.66■□□□□ 0.9
ATG4D-208ENST00000588667 SORCS1Q8WY21 1168 aa20.66■□□□□ 0.9
ATG4D-208ENST00000588667 ACOX2Q99424 681 aa20.66■□□□□ 0.9
ATG4D-208ENST00000588667 NAP1L3Q99457 506 aaPredicted RBP20.66■□□□□ 0.9
ATG4D-208ENST00000588667 TMEM248Q9NWD8 314 aa20.66■□□□□ 0.9
ATG4D-208ENST00000588667 K7ESF4 209 aa20.65■□□□□ 0.9
ATG4D-208ENST00000588667 MZF1P28698 734 aaPredicted RBP20.65■□□□□ 0.9
ATG4D-208ENST00000588667 EPHB2P29323 1055 aa20.65■□□□□ 0.9
ATG4D-208ENST00000588667 SSR1P43307 286 aaKnown RBP20.65■□□□□ 0.9
ATG4D-208ENST00000588667 MARCKSL1P49006 195 aa20.65■□□□□ 0.9
ATG4D-208ENST00000588667 MAPKAPK2P49137 400 aa20.65■□□□□ 0.9
ATG4D-208ENST00000588667 ZNF135P52742 658 aaPredicted RBP20.65■□□□□ 0.9
ATG4D-208ENST00000588667 PTPN5P54829 565 aa20.65■□□□□ 0.9
ATG4D-208ENST00000588667 CSTF1Q05048 431 aaKnown RBP20.65■□□□□ 0.9
ATG4D-208ENST00000588667 ENPP2Q13822 863 aa20.65■□□□□ 0.9
ATG4D-208ENST00000588667 ZNF234Q14588 700 aa20.65■□□□□ 0.9
ATG4D-208ENST00000588667 CRY1Q16526 586 aa20.65■□□□□ 0.9
ATG4D-208ENST00000588667 CA9Q16790 459 aa20.65■□□□□ 0.9
ATG4D-208ENST00000588667 HADHQ16836 314 aaKnown RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms