RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 CEBPBP17676 345 aa26.64■■□□□ 1.86
SCAMP4-210ENST00000588555 YBEYP58557 167 aaPredicted RBP26.64■■□□□ 1.86
SCAMP4-210ENST00000588555 UAP1Q16222 522 aaPredicted RBP26.64■■□□□ 1.86
SCAMP4-210ENST00000588555 PARP15Q460N3 678 aa26.64■■□□□ 1.86
SCAMP4-210ENST00000588555 FAXCQ5TGI0 409 aa26.64■■□□□ 1.86
SCAMP4-210ENST00000588555 TTC39BQ5VTQ0 682 aaPredicted RBP26.64■■□□□ 1.86
SCAMP4-210ENST00000588555 CHRDL2Q6WN34 429 aa26.64■■□□□ 1.86
SCAMP4-210ENST00000588555 RIN3Q8TB24 985 aa26.64■■□□□ 1.86
SCAMP4-210ENST00000588555 SH3RF2Q8TEC5 729 aa26.64■■□□□ 1.86
SCAMP4-210ENST00000588555 USP13Q92995 863 aaPredicted RBP26.64■■□□□ 1.86
SCAMP4-210ENST00000588555 PPP2R3CQ969Q6 453 aa26.64■■□□□ 1.86
SCAMP4-210ENST00000588555 TSPYL1Q9H0U9 437 aa26.64■■□□□ 1.86
SCAMP4-210ENST00000588555 VIPAS39Q9H9C1 493 aa26.64■■□□□ 1.86
SCAMP4-210ENST00000588555 PIDD1Q9HB75 910 aa26.64■■□□□ 1.86
SCAMP4-210ENST00000588555 DZANK1Q9NVP4 752 aa26.64■■□□□ 1.86
SCAMP4-210ENST00000588555 ZNF510Q9Y2H8 683 aa26.64■■□□□ 1.86
SCAMP4-210ENST00000588555 ATP8A1Q9Y2Q0 1164 aa26.64■■□□□ 1.86
SCAMP4-210ENST00000588555 SH3BP1Q9Y3L3 701 aa26.64■■□□□ 1.86
SCAMP4-210ENST00000588555 A0A1B0GVM2 712 aa26.63■■□□□ 1.85
SCAMP4-210ENST00000588555 TCAF2A6NFQ2 919 aa26.63■■□□□ 1.85
SCAMP4-210ENST00000588555 SMAPO00193 183 aa26.63■■□□□ 1.85
SCAMP4-210ENST00000588555 IFI35P80217 286 aaPredicted RBP26.63■■□□□ 1.85
SCAMP4-210ENST00000588555 GAD2Q05329 585 aa26.63■■□□□ 1.85
SCAMP4-210ENST00000588555 TEX44Q53QW1 395 aa26.63■■□□□ 1.85
SCAMP4-210ENST00000588555 BBS7Q8IWZ6 715 aa26.63■■□□□ 1.85
SCAMP4-210ENST00000588555 ZNF419Q96HQ0 510 aaPredicted RBP26.63■■□□□ 1.85
SCAMP4-210ENST00000588555 ZSWIM3Q96MP5 696 aa26.63■■□□□ 1.85
SCAMP4-210ENST00000588555 VAT1Q99536 393 aa26.63■■□□□ 1.85
SCAMP4-210ENST00000588555 IPO11Q9UI26 975 aaKnown RBP26.63■■□□□ 1.85
SCAMP4-210ENST00000588555 ZMYM5Q9UJ78 669 aa26.63■■□□□ 1.85
SCAMP4-210ENST00000588555 MYO18AQ92614 2054 aaKnown RBP26.63■■□□□ 1.85
SCAMP4-210ENST00000588555 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.63■■□□□ 1.85
SCAMP4-210ENST00000588555 ARHGAP42A6NI28 874 aa26.63■■□□□ 1.85
SCAMP4-210ENST00000588555 MATN3O15232 486 aa26.63■■□□□ 1.85
SCAMP4-210ENST00000588555 PEX11BO96011 259 aa26.63■■□□□ 1.85
SCAMP4-210ENST00000588555 HYAL1Q12794 435 aa26.63■■□□□ 1.85
SCAMP4-210ENST00000588555 SEMA5AQ13591 1074 aa26.63■■□□□ 1.85
SCAMP4-210ENST00000588555 SLMAPQ14BN4 828 aa26.63■■□□□ 1.85
SCAMP4-210ENST00000588555 TMEM184AQ6ZMB5 413 aa26.63■■□□□ 1.85
SCAMP4-210ENST00000588555 CCDC25Q86WR0 208 aa26.63■■□□□ 1.85
SCAMP4-210ENST00000588555 CPXM2Q8N436 756 aa26.63■■□□□ 1.85
SCAMP4-210ENST00000588555 OR52K2Q8NGK3 314 aa26.63■■□□□ 1.85
SCAMP4-210ENST00000588555 ITFG1Q8TB96 612 aa26.63■■□□□ 1.85
SCAMP4-210ENST00000588555 FATE1Q969F0 183 aa26.63■■□□□ 1.85
SCAMP4-210ENST00000588555 NSUN3Q9H649 340 aaKnown RBP26.63■■□□□ 1.85
SCAMP4-210ENST00000588555 IGFLR1Q9H665 355 aa26.63■■□□□ 1.85
SCAMP4-210ENST00000588555 TDP1Q9NUW8 608 aa26.63■■□□□ 1.85
SCAMP4-210ENST00000588555 IGSF9Q9P2J2 1179 aa26.63■■□□□ 1.85
SCAMP4-210ENST00000588555 MRPS23Q9Y3D9 190 aaKnown RBP26.63■■□□□ 1.85
SCAMP4-210ENST00000588555 PRAMEF12O95522 483 aa26.62■■□□□ 1.85
SCAMP4-210ENST00000588555 HSD17B3P37058 310 aa26.62■■□□□ 1.85
SCAMP4-210ENST00000588555 RGS19P49795 217 aa26.62■■□□□ 1.85
SCAMP4-210ENST00000588555 POLD3Q15054 466 aaPredicted RBP26.62■■□□□ 1.85
SCAMP4-210ENST00000588555 TIGD7Q6NT04 549 aaPredicted RBP26.62■■□□□ 1.85
SCAMP4-210ENST00000588555 TTC16Q8NEE8 873 aa26.62■■□□□ 1.85
SCAMP4-210ENST00000588555 ING5Q8WYH8 240 aa26.62■■□□□ 1.85
SCAMP4-210ENST00000588555 KLHL8Q9P2G9 620 aaPredicted RBP26.62■■□□□ 1.85
SCAMP4-210ENST00000588555 TRHDEQ9UKU6 1024 aa26.62■■□□□ 1.85
SCAMP4-210ENST00000588555 E2F8A0AVK6 867 aa26.61■■□□□ 1.85
SCAMP4-210ENST00000588555 JCHAINP01591 159 aa26.61■■□□□ 1.85
SCAMP4-210ENST00000588555 CCNB1P14635 433 aa26.61■■□□□ 1.85
SCAMP4-210ENST00000588555 CD68P34810 354 aaPredicted RBP26.61■■□□□ 1.85
SCAMP4-210ENST00000588555 FDFT1P37268 417 aa26.61■■□□□ 1.85
SCAMP4-210ENST00000588555 SERINC3Q13530 473 aa26.61■■□□□ 1.85
SCAMP4-210ENST00000588555 TCEAL5Q5H9L2 206 aa26.61■■□□□ 1.85
SCAMP4-210ENST00000588555 PID1Q7Z2X4 250 aa26.61■■□□□ 1.85
SCAMP4-210ENST00000588555 CNTD1Q8N815 330 aa26.61■■□□□ 1.85
SCAMP4-210ENST00000588555 MAML1Q92585 1016 aa26.61■■□□□ 1.85
SCAMP4-210ENST00000588555 TEKT5Q96M29 485 aa26.61■■□□□ 1.85
SCAMP4-210ENST00000588555 IL12RB2Q99665 862 aa26.61■■□□□ 1.85
SCAMP4-210ENST00000588555 EPB41L4BQ9H329 900 aa26.61■■□□□ 1.85
SCAMP4-210ENST00000588555 DNAJC17Q9NVM6 304 aaKnown RBP26.61■■□□□ 1.85
SCAMP4-210ENST00000588555 TBC1D30Q9Y2I9 924 aa26.61■■□□□ 1.85
SCAMP4-210ENST00000588555 GOLGA8MH3BSY2 632 aa26.61■■□□□ 1.85
SCAMP4-210ENST00000588555 ZBTB24O43167 697 aaPredicted RBP26.61■■□□□ 1.85
SCAMP4-210ENST00000588555 ACVRL1P37023 503 aa26.61■■□□□ 1.85
SCAMP4-210ENST00000588555 PMS2P54278 862 aa26.61■■□□□ 1.85
SCAMP4-210ENST00000588555 PARP6Q2NL67 630 aa26.61■■□□□ 1.85
SCAMP4-210ENST00000588555 SPDYCQ5MJ68 293 aa26.61■■□□□ 1.85
SCAMP4-210ENST00000588555 SYCP2LQ5T4T6 812 aa26.61■■□□□ 1.85
SCAMP4-210ENST00000588555 RELL1Q8IUW5 271 aa26.61■■□□□ 1.85
SCAMP4-210ENST00000588555 EFHBQ8N7U6 833 aa26.61■■□□□ 1.85
SCAMP4-210ENST00000588555 HJURPQ8NCD3 748 aaPredicted RBP26.61■■□□□ 1.85
SCAMP4-210ENST00000588555 EXOC4Q96A65 974 aa26.61■■□□□ 1.85
SCAMP4-210ENST00000588555 RBM15Q96T37 977 aaKnown RBP eCLIP26.61■■□□□ 1.854e-6■■■■□ 23.2
SCAMP4-210ENST00000588555 GORASP1Q9BQQ3 440 aa26.61■■□□□ 1.85
SCAMP4-210ENST00000588555 MAGEH1Q9H213 219 aa26.61■■□□□ 1.85
SCAMP4-210ENST00000588555 ZNF576Q9H609 170 aa26.61■■□□□ 1.85
SCAMP4-210ENST00000588555 J3KR12 359 aa26.6■■□□□ 1.85
SCAMP4-210ENST00000588555 LINC01565O15544 149 aa26.6■■□□□ 1.85
SCAMP4-210ENST00000588555 APRTP07741 180 aa26.6■■□□□ 1.85
SCAMP4-210ENST00000588555 PSMB4P28070 264 aa26.6■■□□□ 1.85
SCAMP4-210ENST00000588555 C6orf118Q5T5N4 469 aa26.6■■□□□ 1.85
SCAMP4-210ENST00000588555 CXorf57Q6NSI4 855 aaKnown RBP26.6■■□□□ 1.85
SCAMP4-210ENST00000588555 SETD3Q86TU7 594 aaPredicted RBP26.6■■□□□ 1.85
SCAMP4-210ENST00000588555 IQCKQ8N0W5 287 aa26.6■■□□□ 1.85
SCAMP4-210ENST00000588555 ARHGEF2Q92974 986 aaKnown RBP26.6■■□□□ 1.85
SCAMP4-210ENST00000588555 AGAP3Q96P47 875 aa26.6■■□□□ 1.85
SCAMP4-210ENST00000588555 SEMA4AQ9H3S1 761 aa26.6■■□□□ 1.85
SCAMP4-210ENST00000588555 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms