RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 MICAL1Q8TDZ2 1067 aa14.36□□□□□ -0.11
NEDD4L-223ENST00000588516 NR1H4Q96RI1 486 aaPredicted RBP14.36□□□□□ -0.11
NEDD4L-223ENST00000588516 GAS2L1Q99501 681 aaPredicted RBP14.36□□□□□ -0.11
NEDD4L-223ENST00000588516 OSMRQ99650 979 aa14.36□□□□□ -0.11
NEDD4L-223ENST00000588516 IL22Q9GZX6 179 aa14.36□□□□□ -0.11
NEDD4L-223ENST00000588516 SCOCQ9UIL1 159 aa14.36□□□□□ -0.11
NEDD4L-223ENST00000588516 SUFUQ9UMX1 484 aa14.36□□□□□ -0.11
NEDD4L-223ENST00000588516 DNAJC16Q9Y2G8 782 aa14.36□□□□□ -0.11
NEDD4L-223ENST00000588516 RPS6KL1Q9Y6S9 549 aa14.36□□□□□ -0.11
NEDD4L-223ENST00000588516 CDH23Q9H251 3354 aa14.36□□□□□ -0.11
NEDD4L-223ENST00000588516 NCOR1O75376 2440 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 HMX2A2RU54 273 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 H0Y3Z8 333 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 M0QZ92 97 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 CYB561D2O14569 222 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 TPP1O14773 563 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 PPEF2O14830 753 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 DCLK1O15075 740 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 MFSD11O43934 449 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 SMNDC1O75940 238 aaKnown RBP eCLIP14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 PROCP04070 461 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 MYCNP04198 464 aaPredicted RBP14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 COL6A2P12110 1019 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 GM2AP17900 193 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 ACAT1P24752 427 aaKnown RBP14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 ADSLP30566 484 aaPredicted RBP14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 MAGEA12P43365 314 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 KPNA2P52292 529 aaKnown RBP14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 COPAP53621 1224 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 ACTR3P61158 418 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 PDE1CQ14123 709 aaPredicted RBP14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 SNX17Q15036 470 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 TRIM60Q495X7 471 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 ACSBG2Q5FVE4 666 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 MORN1Q5T089 497 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 TEDDM1Q5T9Z0 273 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 NAPEPLDQ6IQ20 393 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 SLC39A5Q6ZMH5 540 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 ALYREFQ86V81 257 aaKnown RBP14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 KIRREL3Q8IZU9 778 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 ZNF567Q8N184 647 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 SCML4Q8N228 414 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 PLCD3Q8N3E9 789 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 MPP5Q8N3R9 675 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 CLEC4CQ8WTT0 213 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 LGMNQ99538 433 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 RBBP8Q99708 897 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 MECRQ9BV79 373 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 OSBPL1AQ9BXW6 950 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 AP5M1Q9H0R1 490 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 NXF3Q9H4D5 531 aaKnown RBP14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 PRDM12Q9H4Q4 367 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 ZNF576Q9H609 170 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 CASS4Q9NQ75 786 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 SPATS2LQ9NUQ6 558 aaKnown RBP14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 NDE1Q9NXR1 346 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 SEPT10Q9P0V9 454 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 COPG2Q9UBF2 871 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 FBXW11Q9UKB1 542 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 VANGL2Q9ULK5 521 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 GINS2Q9Y248 185 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 HCN4Q9Y3Q4 1203 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 LTBP2Q14767 1821 aa14.35□□□□□ -0.11
NEDD4L-223ENST00000588516 CCDC195A0A1B0GUA6 201 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 A6NHS1 94 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 GABRDO14764 452 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 CREB3O43889 395 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 UGT1A9O60656 530 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 FGF3P11487 239 aaPredicted RBP14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 LMO2P25791 158 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 PSMB4P28070 264 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 PCSK1P29120 753 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 RPL9P32969 192 aaKnown RBP14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 PSEN2P49810 448 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 TKTL1P51854 596 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 LIMK2P53671 638 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 ALDH18A1P54886 795 aaKnown RBP14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 RPL26P61254 145 aaKnown RBP14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 MAP2K5Q13163 448 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 THOC5Q13769 683 aaKnown RBP14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 RCN2Q14257 317 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 PDPK2PQ6A1A2 396 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 TRIM68Q6AZZ1 485 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 TAF2Q6P1X5 1199 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 DSTYKQ6XUX3 929 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 BEND5Q7L4P6 421 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 TMEM135Q86UB9 458 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 RSPH3Q86UC2 560 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 CCDC117Q8IWD4 279 aaPredicted RBP14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 ULK2Q8IYT8 1036 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 CCDC33Q8N5R6 958 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 DNAAF3Q8N9W5 541 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 ARRDC4Q8NCT1 418 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 ARNTL2Q8WYA1 636 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 HDAC11Q96DB2 347 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 APOL6Q9BWW8 343 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 GBA3Q9H227 469 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 UGT1A7Q9HAW7 530 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 UGT1A10Q9HAW8 530 aa14.34□□□□□ -0.11
NEDD4L-223ENST00000588516 UGT1A8Q9HAW9 530 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms