RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 APC2O95996 2303 aa14.11□□□□□ -0.15
HDAC5-208ENST00000588419 C7P10643 843 aa14.11□□□□□ -0.15
HDAC5-208ENST00000588419 EPHA8P29322 1005 aaPredicted RBP14.11□□□□□ -0.15
HDAC5-208ENST00000588419 DRD3P35462 400 aa14.11□□□□□ -0.15
HDAC5-208ENST00000588419 MTIF2P46199 727 aaKnown RBP14.11□□□□□ -0.15
HDAC5-208ENST00000588419 ARRB1P49407 418 aaPredicted RBP14.11□□□□□ -0.15
HDAC5-208ENST00000588419 CCR5P51681 352 aa14.11□□□□□ -0.15
HDAC5-208ENST00000588419 MARSP56192 900 aaKnown RBP14.11□□□□□ -0.15
HDAC5-208ENST00000588419 SULT2A1Q06520 285 aa14.11□□□□□ -0.15
HDAC5-208ENST00000588419 SLC12A1Q13621 1099 aa14.11□□□□□ -0.15
HDAC5-208ENST00000588419 ARID5BQ14865 1188 aa14.11□□□□□ -0.15
HDAC5-208ENST00000588419 NAPEPLDQ6IQ20 393 aa14.11□□□□□ -0.15
HDAC5-208ENST00000588419 CXorf57Q6NSI4 855 aaKnown RBP14.11□□□□□ -0.15
HDAC5-208ENST00000588419 FBXL22Q6P050 247 aa14.11□□□□□ -0.15
HDAC5-208ENST00000588419 GBP6Q6ZN66 633 aa14.11□□□□□ -0.15
HDAC5-208ENST00000588419 Q6ZVU0 165 aa14.11□□□□□ -0.15
HDAC5-208ENST00000588419 BEND5Q7L4P6 421 aa14.11□□□□□ -0.15
HDAC5-208ENST00000588419 DSG4Q86SJ6 1040 aa14.11□□□□□ -0.15
HDAC5-208ENST00000588419 TMEM110Q86TL2 294 aa14.11□□□□□ -0.15
HDAC5-208ENST00000588419 ELOA2Q8IYF1 753 aaPredicted RBP14.11□□□□□ -0.15
HDAC5-208ENST00000588419 SPAG5Q96R06 1193 aa14.11□□□□□ -0.15
HDAC5-208ENST00000588419 PRMT1Q99873 361 aaKnown RBP14.11□□□□□ -0.15
HDAC5-208ENST00000588419 SIK2Q9H0K1 926 aa14.11□□□□□ -0.15
HDAC5-208ENST00000588419 MUC3BQ9H195 1237 aa14.11□□□□□ -0.15
HDAC5-208ENST00000588419 PLCB1Q9NQ66 1216 aa14.11□□□□□ -0.15
HDAC5-208ENST00000588419 VPS28Q9UK41 221 aa14.11□□□□□ -0.15
HDAC5-208ENST00000588419 FREM2Q5SZK8 3169 aa14.11□□□□□ -0.15
HDAC5-208ENST00000588419 URB1O60287 2271 aaKnown RBP14.1□□□□□ -0.15
HDAC5-208ENST00000588419 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.1□□□□□ -0.15
HDAC5-208ENST00000588419 A0A1W2PR77 199 aa14.1□□□□□ -0.15
HDAC5-208ENST00000588419 C1QTNF3-AMACRE9PGA6 284 aa14.1□□□□□ -0.15
HDAC5-208ENST00000588419 SDC3O75056 442 aa14.1□□□□□ -0.15
HDAC5-208ENST00000588419 DAB1O75553 588 aa14.1□□□□□ -0.15
HDAC5-208ENST00000588419 RFPL3O75679 317 aa14.1□□□□□ -0.15
HDAC5-208ENST00000588419 DKK1O94907 266 aa14.1□□□□□ -0.15
HDAC5-208ENST00000588419 ERBB2P04626 1255 aa14.1□□□□□ -0.15
HDAC5-208ENST00000588419 PNMA6AP0CW24 399 aaPredicted RBP14.1□□□□□ -0.15
HDAC5-208ENST00000588419 SLC2A3P11169 496 aa14.1□□□□□ -0.15
HDAC5-208ENST00000588419 HNF1BP35680 557 aa14.1□□□□□ -0.15
HDAC5-208ENST00000588419 RNASE9P60153 205 aaKnown RBP14.1□□□□□ -0.15
HDAC5-208ENST00000588419 BNIP3Q12983 259 aa14.1□□□□□ -0.15
HDAC5-208ENST00000588419 ZNF177Q13360 481 aaPredicted RBP14.1□□□□□ -0.15
HDAC5-208ENST00000588419 AUHQ13825 339 aaKnown RBP14.1□□□□□ -0.15
HDAC5-208ENST00000588419 SHBQ15464 509 aa14.1□□□□□ -0.15
HDAC5-208ENST00000588419 CAMK4Q16566 473 aa14.1□□□□□ -0.15
HDAC5-208ENST00000588419 MEA1Q16626 185 aa14.1□□□□□ -0.15
HDAC5-208ENST00000588419 TPD52L1Q16890 204 aaPredicted RBP14.1□□□□□ -0.15
HDAC5-208ENST00000588419 EFHC1Q5JVL4 640 aa14.1□□□□□ -0.15
HDAC5-208ENST00000588419 FOXR2Q6PJQ5 311 aa14.1□□□□□ -0.15
HDAC5-208ENST00000588419 C11orf57Q6ZUT1 292 aaPredicted RBP14.1□□□□□ -0.15
HDAC5-208ENST00000588419 PRPF39Q86UA1 669 aaKnown RBP14.1□□□□□ -0.15
HDAC5-208ENST00000588419 OR52K2Q8NGK3 314 aa14.1□□□□□ -0.15
HDAC5-208ENST00000588419 PIP4K2CQ8TBX8 421 aa14.1□□□□□ -0.15
HDAC5-208ENST00000588419 NOX5Q96PH1 765 aa14.1□□□□□ -0.15
HDAC5-208ENST00000588419 SLC2A13Q96QE2 648 aa14.1□□□□□ -0.15
HDAC5-208ENST00000588419 PDCL3Q9H2J4 239 aa14.1□□□□□ -0.15
HDAC5-208ENST00000588419 APEX2Q9UBZ4 518 aa14.1□□□□□ -0.15
HDAC5-208ENST00000588419 AJAP1Q9UKB5 411 aaPredicted RBP14.1□□□□□ -0.15
HDAC5-208ENST00000588419 SARDHQ9UL12 918 aa14.1□□□□□ -0.15
HDAC5-208ENST00000588419 CA5BQ9Y2D0 317 aa14.1□□□□□ -0.15
HDAC5-208ENST00000588419 HS3ST4Q9Y661 456 aa14.1□□□□□ -0.15
HDAC5-208ENST00000588419 ANKRD11Q6UB99 2663 aaPredicted RBP14.1□□□□□ -0.15
HDAC5-208ENST00000588419 TRPM6Q9BX84 2022 aa14.1□□□□□ -0.15
HDAC5-208ENST00000588419 M0QYT0 321 aa14.09□□□□□ -0.15
HDAC5-208ENST00000588419 TLR4O00206 839 aa14.09□□□□□ -0.15
HDAC5-208ENST00000588419 YKT6O15498 198 aa14.09□□□□□ -0.15
HDAC5-208ENST00000588419 RHOCP08134 193 aa14.09□□□□□ -0.15
HDAC5-208ENST00000588419 JUPP14923 745 aa14.09□□□□□ -0.15
HDAC5-208ENST00000588419 KRT9P35527 623 aa14.09□□□□□ -0.15
HDAC5-208ENST00000588419 SULT1E1P49888 294 aa14.09□□□□□ -0.15
HDAC5-208ENST00000588419 OXCT1P55809 520 aa14.09□□□□□ -0.15
HDAC5-208ENST00000588419 NXPH1P58417 271 aa14.09□□□□□ -0.15
HDAC5-208ENST00000588419 CNTN1Q12860 1018 aa14.09□□□□□ -0.15
HDAC5-208ENST00000588419 ACAP1Q15027 740 aa14.09□□□□□ -0.15
HDAC5-208ENST00000588419 DLG2Q15700 870 aa14.09□□□□□ -0.15
HDAC5-208ENST00000588419 SMAD1Q15797 465 aaKnown RBP14.09□□□□□ -0.15
HDAC5-208ENST00000588419 EXOC3L4Q17RC7 722 aa14.09□□□□□ -0.15
HDAC5-208ENST00000588419 FAM46CQ5VWP2 391 aa14.09□□□□□ -0.15
HDAC5-208ENST00000588419 PDCD7Q8N8D1 485 aaKnown RBP14.09□□□□□ -0.15
HDAC5-208ENST00000588419 SAP25Q8TEE9 199 aa14.09□□□□□ -0.15
HDAC5-208ENST00000588419 FRS2Q8WU20 508 aa14.09□□□□□ -0.15
HDAC5-208ENST00000588419 KLK6Q92876 244 aa14.09□□□□□ -0.15
HDAC5-208ENST00000588419 FAM81BQ96LP2 452 aa14.09□□□□□ -0.15
HDAC5-208ENST00000588419 SNX10Q9Y5X0 201 aa14.09□□□□□ -0.15
HDAC5-208ENST00000588419 ARID1BQ8NFD5 2236 aaPredicted RBP14.09□□□□□ -0.15
HDAC5-208ENST00000588419 KPNA3O00505 521 aaPredicted RBP14.08□□□□□ -0.16
HDAC5-208ENST00000588419 PLRG1O43660 514 aaKnown RBP14.08□□□□□ -0.16
HDAC5-208ENST00000588419 PAGE1O75459 146 aa14.08□□□□□ -0.16
HDAC5-208ENST00000588419 GLI1P08151 1106 aa14.08□□□□□ -0.16
HDAC5-208ENST00000588419 PTK2Q05397 1052 aa14.08□□□□□ -0.16
HDAC5-208ENST00000588419 CAMK2BQ13554 666 aa14.08□□□□□ -0.16
HDAC5-208ENST00000588419 STAT4Q14765 748 aa14.08□□□□□ -0.16
HDAC5-208ENST00000588419 PTPN20Q4JDL3 420 aa14.08□□□□□ -0.16
HDAC5-208ENST00000588419 C6orf118Q5T5N4 469 aa14.08□□□□□ -0.16
HDAC5-208ENST00000588419 HES3Q5TGS1 186 aa14.08□□□□□ -0.16
HDAC5-208ENST00000588419 AGBL4Q5VU57 503 aa14.08□□□□□ -0.16
HDAC5-208ENST00000588419 OLFML1Q6UWY5 402 aa14.08□□□□□ -0.16
HDAC5-208ENST00000588419 C14orf80Q86SX3 495 aa14.08□□□□□ -0.16
HDAC5-208ENST00000588419 OXR1Q8N573 874 aa14.08□□□□□ -0.16
HDAC5-208ENST00000588419 WDTC1Q8N5D0 677 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms