RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 IL4RP24394 825 aa9.87□□□□□ -0.83
LINC01539-201ENST00000587904 ATP5DP30049 168 aa9.87□□□□□ -0.83
LINC01539-201ENST00000587904 L1CAMP32004 1257 aa9.87□□□□□ -0.83
LINC01539-201ENST00000587904 VEGFBP49765 207 aa9.87□□□□□ -0.83
LINC01539-201ENST00000587904 BCAR1P56945 870 aa9.87□□□□□ -0.83
LINC01539-201ENST00000587904 TSPY1Q01534 308 aa9.87□□□□□ -0.83
LINC01539-201ENST00000587904 DSC1Q08554 894 aa9.87□□□□□ -0.83
LINC01539-201ENST00000587904 MMRN1Q13201 1228 aa9.87□□□□□ -0.83
LINC01539-201ENST00000587904 HNRNPDQ14103 355 aaKnown RBP9.87□□□□□ -0.83
LINC01539-201ENST00000587904 OVOS1Q6IE37 1185 aa9.87□□□□□ -0.83
LINC01539-201ENST00000587904 C1orf228Q6PIY5 440 aa9.87□□□□□ -0.83
LINC01539-201ENST00000587904 LRRC8DQ7L1W4 858 aa9.87□□□□□ -0.83
LINC01539-201ENST00000587904 UBE2Q1Q7Z7E8 422 aa9.87□□□□□ -0.83
LINC01539-201ENST00000587904 CDKL3Q8IVW4 592 aaPredicted RBP9.87□□□□□ -0.83
LINC01539-201ENST00000587904 LSMEM2Q8N112 164 aa9.87□□□□□ -0.83
LINC01539-201ENST00000587904 PQLC3Q8N755 202 aa9.87□□□□□ -0.83
LINC01539-201ENST00000587904 PLD5Q8N7P1 536 aa9.87□□□□□ -0.83
LINC01539-201ENST00000587904 SPERTQ8NA61 448 aa9.87□□□□□ -0.83
LINC01539-201ENST00000587904 GLIS1Q8NBF1 620 aa9.87□□□□□ -0.83
LINC01539-201ENST00000587904 CCDC110Q8TBZ0 833 aa9.87□□□□□ -0.83
LINC01539-201ENST00000587904 MYLPFQ96A32 169 aa9.87□□□□□ -0.83
LINC01539-201ENST00000587904 RBM15Q96T37 977 aaKnown RBP eCLIP9.87□□□□□ -0.83
LINC01539-201ENST00000587904 PKMYT1Q99640 499 aa9.87□□□□□ -0.83
LINC01539-201ENST00000587904 SMOQ99835 787 aa9.87□□□□□ -0.83
LINC01539-201ENST00000587904 RTP3Q9BQQ7 232 aa9.87□□□□□ -0.83
LINC01539-201ENST00000587904 HEPHQ9BQS7 1158 aa9.87□□□□□ -0.83
LINC01539-201ENST00000587904 CCDC77Q9BR77 488 aa9.87□□□□□ -0.83
LINC01539-201ENST00000587904 PAAF1Q9BRP4 392 aa9.87□□□□□ -0.83
LINC01539-201ENST00000587904 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.87□□□□□ -0.83
LINC01539-201ENST00000587904 ELAC1Q9H777 363 aaKnown RBP9.87□□□□□ -0.83
LINC01539-201ENST00000587904 PPCSQ9HAB8 311 aa9.87□□□□□ -0.83
LINC01539-201ENST00000587904 MKS1Q9NXB0 559 aa9.87□□□□□ -0.83
LINC01539-201ENST00000587904 DNAJB4Q9UDY4 337 aa9.87□□□□□ -0.83
LINC01539-201ENST00000587904 TRIM17Q9Y577 477 aa9.87□□□□□ -0.83
LINC01539-201ENST00000587904 NOX1Q9Y5S8 564 aa9.87□□□□□ -0.83
LINC01539-201ENST00000587904 PATJQ8NI35 1801 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 ARHGAP10A1A4S6 786 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 BCLAF3A2AJT9 711 aaKnown RBP9.86□□□□□ -0.83
LINC01539-201ENST00000587904 RASA4BC9J798 803 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 RASGRF2O14827 1237 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 VILLO15195 856 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 RGS16O15492 202 aaPredicted RBP9.86□□□□□ -0.83
LINC01539-201ENST00000587904 RASA4O43374 803 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 ENTPD5O75356 428 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 BEST1O76090 585 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 PSMG1O95456 288 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 CYP2F1P24903 491 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 PTPN4P29074 926 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 ARL4AP40617 200 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 ZNF135P52742 658 aaPredicted RBP9.86□□□□□ -0.83
LINC01539-201ENST00000587904 DSG1Q02413 1049 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 E2F2Q14209 437 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 MBTPS1Q14703 1052 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 RAB6CQ53S08 254 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 DCAF6Q58WW2 860 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 TNFAIP8L3Q5GJ75 292 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 NOMO2Q5JPE7 1267 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 DARS2Q6PI48 645 aaKnown RBP9.86□□□□□ -0.83
LINC01539-201ENST00000587904 CD300LGQ6UXG3 332 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 CENPUQ71F23 418 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 BEND5Q7L4P6 421 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 DDHD1Q8NEL9 900 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 PCDH19Q8TAB3 1148 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 PYROXD1Q8WU10 500 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 ZNF296Q8WUU4 475 aaPredicted RBP9.86□□□□□ -0.83
LINC01539-201ENST00000587904 NTAN1Q96AB6 310 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 PGAP3Q96FM1 320 aaPredicted RBP9.86□□□□□ -0.83
LINC01539-201ENST00000587904 SERPINB12Q96P63 405 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 DDX50Q9BQ39 737 aaKnown RBP9.86□□□□□ -0.83
LINC01539-201ENST00000587904 FRMD8Q9BZ67 464 aaPredicted RBP9.86□□□□□ -0.83
LINC01539-201ENST00000587904 ULBP1Q9BZM6 244 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 RAB6CQ9H0N0 254 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 DHX35Q9H5Z1 703 aaKnown RBP9.86□□□□□ -0.83
LINC01539-201ENST00000587904 FGFR1OP2Q9NVK5 253 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 GPATCH2LQ9NWQ4 482 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 TMEM161AQ9NX61 479 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 ZDHHC7Q9NXF8 308 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 NINJ2Q9NZG7 142 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 PAK5Q9P286 719 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 SAE1Q9UBE0 346 aaPredicted RBP9.86□□□□□ -0.83
LINC01539-201ENST00000587904 FZD10Q9ULW2 581 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 TDRKHQ9Y2W6 561 aaKnown RBP9.86□□□□□ -0.83
LINC01539-201ENST00000587904 TIMM13Q9Y5L4 95 aaPredicted RBP9.86□□□□□ -0.83
LINC01539-201ENST00000587904 H3BRJ5 948 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 PITPNM1O00562 1244 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 CAPN9O14815 690 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 ADAM23O75077 832 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 ACSL3O95573 720 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 F9P00740 461 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 ZSCAN5DPP0CG00 497 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 HSPA1AP0DMV8 641 aaKnown RBP9.86□□□□□ -0.83
LINC01539-201ENST00000587904 HSPA1BP0DMV9 641 aaKnown RBP9.86□□□□□ -0.83
LINC01539-201ENST00000587904 TFE3P19532 575 aaPredicted RBP9.86□□□□□ -0.83
LINC01539-201ENST00000587904 IGFBP6P24592 240 aaPredicted RBP9.86□□□□□ -0.83
LINC01539-201ENST00000587904 CRABP2P29373 138 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 MAGEA4P43358 317 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 GDF10P55107 478 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 SCAPQ12770 1279 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 CBLBQ13191 982 aa9.86□□□□□ -0.83
LINC01539-201ENST00000587904 LRP8Q14114 963 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms