RNA–Protein interactions for RNA: ENST00000587147.1

VAT1-204, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-204ENST00000587147 FAM72DQ6L9T8 149 aa17.34■□□□□ 0.37
VAT1-204ENST00000587147 RWDD4Q6NW29 188 aaKnown RBP17.34■□□□□ 0.37
VAT1-204ENST00000587147 CYP4V2Q6ZWL3 525 aaPredicted RBP17.34■□□□□ 0.37
VAT1-204ENST00000587147 FAM72BQ86X60 149 aa17.34■□□□□ 0.37
VAT1-204ENST00000587147 RTL3Q8N8U3 475 aaKnown RBP17.34■□□□□ 0.37
VAT1-204ENST00000587147 SUMF1Q8NBK3 374 aa17.34■□□□□ 0.37
VAT1-204ENST00000587147 CYB5D2Q8WUJ1 264 aa17.34■□□□□ 0.37
VAT1-204ENST00000587147 HMGB4Q8WW32 186 aa17.34■□□□□ 0.37
VAT1-204ENST00000587147 RFFLQ8WZ73 363 aa17.34■□□□□ 0.37
VAT1-204ENST00000587147 LOXL4Q96JB6 756 aa17.34■□□□□ 0.37
VAT1-204ENST00000587147 MRGPRX1Q96LB2 322 aa17.34■□□□□ 0.37
VAT1-204ENST00000587147 SNRNP25Q9BV90 132 aaKnown RBP17.34■□□□□ 0.37
VAT1-204ENST00000587147 ZDHHC4Q9NPG8 344 aa17.34■□□□□ 0.37
VAT1-204ENST00000587147 POLR3BQ9NW08 1133 aaPredicted RBP17.34■□□□□ 0.37
VAT1-204ENST00000587147 SCML1Q9UN30 329 aa17.34■□□□□ 0.37
VAT1-204ENST00000587147 PRR23AA6NEV1 266 aa17.33■□□□□ 0.36
VAT1-204ENST00000587147 HRO43593 1189 aa17.33■□□□□ 0.36
VAT1-204ENST00000587147 ATP9BO43861 1147 aa17.33■□□□□ 0.36
VAT1-204ENST00000587147 PROSCO94903 275 aa17.33■□□□□ 0.36
VAT1-204ENST00000587147 NDUFV2P19404 249 aa17.33■□□□□ 0.36
VAT1-204ENST00000587147 EPHB2P29323 1055 aa17.33■□□□□ 0.36
VAT1-204ENST00000587147 P2RY2P41231 377 aa17.33■□□□□ 0.36
VAT1-204ENST00000587147 WASP42768 502 aa17.33■□□□□ 0.36
VAT1-204ENST00000587147 HADHBP55084 474 aaKnown RBP17.33■□□□□ 0.36
VAT1-204ENST00000587147 GEMIN4P57678 1058 aaKnown RBP17.33■□□□□ 0.36
VAT1-204ENST00000587147 YBEYP58557 167 aaPredicted RBP17.33■□□□□ 0.36
VAT1-204ENST00000587147 SFSWAPQ12872 951 aaKnown RBP17.33■□□□□ 0.36
VAT1-204ENST00000587147 SIM2Q14190 667 aaPredicted RBP17.33■□□□□ 0.36
VAT1-204ENST00000587147 SPA17Q15506 151 aa17.33■□□□□ 0.36
VAT1-204ENST00000587147 HADHQ16836 314 aaKnown RBP17.33■□□□□ 0.36
VAT1-204ENST00000587147 LAIR1Q6GTX8 287 aa17.33■□□□□ 0.36
VAT1-204ENST00000587147 RETSATQ6NUM9 610 aa17.33■□□□□ 0.36
VAT1-204ENST00000587147 KIAA1211LQ6NV74 962 aa17.33■□□□□ 0.36
VAT1-204ENST00000587147 TFAP2DQ7Z6R9 452 aa17.33■□□□□ 0.36
VAT1-204ENST00000587147 OR52K2Q8NGK3 314 aa17.33■□□□□ 0.36
VAT1-204ENST00000587147 PEBP4Q96S96 227 aa17.33■□□□□ 0.36
VAT1-204ENST00000587147 PRDM16Q9HAZ2 1276 aa17.33■□□□□ 0.36
VAT1-204ENST00000587147 SPTLC3Q9NUV7 552 aa17.33■□□□□ 0.36
VAT1-204ENST00000587147 SPAG17Q6Q759 2223 aa17.32■□□□□ 0.36
VAT1-204ENST00000587147 ZSCAN5CA6NGD5 496 aaPredicted RBP17.32■□□□□ 0.36
VAT1-204ENST00000587147 ALOX15BO15296 676 aa17.32■□□□□ 0.36
VAT1-204ENST00000587147 IPO7O95373 1038 aaKnown RBP17.32■□□□□ 0.36
VAT1-204ENST00000587147 IGLV3-19P01714 112 aa17.32■□□□□ 0.36
VAT1-204ENST00000587147 PXNP49023 591 aaPredicted RBP17.32■□□□□ 0.36
VAT1-204ENST00000587147 COPAP53621 1224 aa17.32■□□□□ 0.36
VAT1-204ENST00000587147 TPI1P60174 286 aa17.32■□□□□ 0.36
VAT1-204ENST00000587147 PARP15Q460N3 678 aa17.32■□□□□ 0.36
VAT1-204ENST00000587147 SLC36A4Q6YBV0 504 aa17.32■□□□□ 0.36
VAT1-204ENST00000587147 UMODL1-AS1Q8N2C9 162 aa17.32■□□□□ 0.36
VAT1-204ENST00000587147 PSMB7Q99436 277 aa17.32■□□□□ 0.36
VAT1-204ENST00000587147 PACSIN1Q9BY11 444 aa17.32■□□□□ 0.36
VAT1-204ENST00000587147 ACE2Q9BYF1 805 aaPredicted RBP17.32■□□□□ 0.36
VAT1-204ENST00000587147 DHX35Q9H5Z1 703 aaKnown RBP17.32■□□□□ 0.36
VAT1-204ENST00000587147 ZWILCHQ9H900 591 aa17.32■□□□□ 0.36
VAT1-204ENST00000587147 PRSS16Q9NQE7 514 aa17.32■□□□□ 0.36
VAT1-204ENST00000587147 RCOR3Q9P2K3 495 aaPredicted RBP17.32■□□□□ 0.36
VAT1-204ENST00000587147 PCSK1NQ9UHG2 260 aa17.32■□□□□ 0.36
VAT1-204ENST00000587147 SMG5Q9UPR3 1016 aaKnown RBP17.32■□□□□ 0.36
VAT1-204ENST00000587147 RAD54BQ9Y620 910 aa17.32■□□□□ 0.36
VAT1-204ENST00000587147 NYNRINQ9P2P1 1898 aaKnown RBP17.31■□□□□ 0.36
VAT1-204ENST00000587147 A0A0A6YYK5 440 aaPredicted RBP17.31■□□□□ 0.36
VAT1-204ENST00000587147 EEF2KO00418 725 aaKnown RBP17.31■□□□□ 0.36
VAT1-204ENST00000587147 CREB3O43889 395 aa17.31■□□□□ 0.36
VAT1-204ENST00000587147 RAMP2O60895 175 aa17.31■□□□□ 0.36
VAT1-204ENST00000587147 RNASEH1O60930 286 aaKnown RBP17.31■□□□□ 0.36
VAT1-204ENST00000587147 RHOBTB1O94844 696 aa17.31■□□□□ 0.36
VAT1-204ENST00000587147 NDST2P52849 883 aa17.31■□□□□ 0.36
VAT1-204ENST00000587147 GSDMDP57764 484 aa17.31■□□□□ 0.36
VAT1-204ENST00000587147 SLC25A11Q02978 314 aaKnown RBP17.31■□□□□ 0.36
VAT1-204ENST00000587147 ELAVL3Q14576 367 aaKnown RBP17.31■□□□□ 0.36
VAT1-204ENST00000587147 ELF2Q15723 593 aa17.31■□□□□ 0.36
VAT1-204ENST00000587147 MAP7D1Q3KQU3 841 aa17.31■□□□□ 0.36
VAT1-204ENST00000587147 CEP68Q76N32 757 aa17.31■□□□□ 0.36
VAT1-204ENST00000587147 POLNQ7Z5Q5 900 aa17.31■□□□□ 0.36
VAT1-204ENST00000587147 TMPRSS6Q8IU80 811 aa17.31■□□□□ 0.36
VAT1-204ENST00000587147 PYROXD2Q8N2H3 581 aa17.31■□□□□ 0.36
VAT1-204ENST00000587147 PGBD3Q8N328 593 aa17.31■□□□□ 0.36
VAT1-204ENST00000587147 SH2D3CQ8N5H7 860 aa17.31■□□□□ 0.36
VAT1-204ENST00000587147 LZTR1Q8N653 840 aa17.31■□□□□ 0.36
VAT1-204ENST00000587147 SLC35G2Q8TBE7 412 aa17.31■□□□□ 0.36
VAT1-204ENST00000587147 PRCCQ92733 491 aaPredicted RBP17.31■□□□□ 0.36
VAT1-204ENST00000587147 SIPA1Q96FS4 1042 aa17.31■□□□□ 0.36
VAT1-204ENST00000587147 CCDC114Q96M63 670 aa17.31■□□□□ 0.36
VAT1-204ENST00000587147 CEP44Q9C0F1 390 aa17.31■□□□□ 0.36
VAT1-204ENST00000587147 MKRN2Q9H000 416 aaKnown RBP17.31■□□□□ 0.36
VAT1-204ENST00000587147 RSPH9Q9H1X1 276 aaPredicted RBP17.31■□□□□ 0.36
VAT1-204ENST00000587147 ITM2CQ9NQX7 267 aa17.31■□□□□ 0.36
VAT1-204ENST00000587147 USP36Q9P275 1121 aaKnown RBP17.31■□□□□ 0.36
VAT1-204ENST00000587147 VPS51Q9UID3 782 aa17.31■□□□□ 0.36
VAT1-204ENST00000587147 HPCAL4Q9UM19 191 aa17.31■□□□□ 0.36
VAT1-204ENST00000587147 ZFHX2Q9C0A1 2572 aaPredicted RBP17.3■□□□□ 0.36
VAT1-204ENST00000587147 A0A0D9SEW6 157 aa17.3■□□□□ 0.36
VAT1-204ENST00000587147 LRP3O75074 770 aa17.3■□□□□ 0.36
VAT1-204ENST00000587147 NDUFA10O95299 355 aa17.3■□□□□ 0.36
VAT1-204ENST00000587147 KRT7P08729 469 aa17.3■□□□□ 0.36
VAT1-204ENST00000587147 OXTRP30559 389 aa17.3■□□□□ 0.36
VAT1-204ENST00000587147 ARL4AP40617 200 aa17.3■□□□□ 0.36
VAT1-204ENST00000587147 DPP6P42658 865 aa17.3■□□□□ 0.36
VAT1-204ENST00000587147 SLC1A1P43005 524 aa17.3■□□□□ 0.36
VAT1-204ENST00000587147 CTSOP43234 321 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms