RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 PAFAH1B3Q15102 231 aaKnown RBP12.98□□□□□ -0.33
VMP1-202ENST00000585847 PDGFRLQ15198 375 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 OASLQ15646 514 aaKnown RBP12.98□□□□□ -0.33
VMP1-202ENST00000585847 CA9Q16790 459 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 ATP13A4Q4VNC1 1196 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 PPP6R3Q5H9R7 873 aaPredicted RBP12.98□□□□□ -0.33
VMP1-202ENST00000585847 SPDYCQ5MJ68 293 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 LY6G5CQ5SRR4 150 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 ADGRF1Q5T601 910 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 FAM72AQ5TYM5 149 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 TTC39BQ5VTQ0 682 aaPredicted RBP12.98□□□□□ -0.33
VMP1-202ENST00000585847 FYB2Q5VWT5 728 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 RAP1GAP2Q684P5 730 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 RNF43Q68DV7 783 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 NAIF1Q69YI7 327 aaPredicted RBP12.98□□□□□ -0.33
VMP1-202ENST00000585847 FAM72DQ6L9T8 149 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 RFWD3Q6PCD5 774 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 LRRC31Q6UY01 552 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 PCGF5Q86SE9 256 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 C12orf40Q86WS4 652 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 FAM72BQ86X60 149 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 YAF2Q8IY57 180 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 CNPY4Q8N129 248 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 PYROXD2Q8N2H3 581 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 PLD5Q8N7P1 536 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 LRRN4CLQ8ND94 238 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 TTC8Q8TAM2 541 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 LRRC45Q96CN5 670 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 OTUB2Q96DC9 234 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 RTP4Q96DX8 246 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 HEMGNQ9BXL5 484 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 FRMD8Q9BZ67 464 aaPredicted RBP12.98□□□□□ -0.33
VMP1-202ENST00000585847 BRD9Q9H8M2 597 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 ECT2Q9H8V3 914 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 SPHK2Q9NRA0 654 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 HAUS2Q9NVX0 235 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 GPATCH2LQ9NWQ4 482 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 THG1LQ9NWX6 298 aaKnown RBP12.98□□□□□ -0.33
VMP1-202ENST00000585847 SMARCAL1Q9NZC9 954 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 MARK1Q9P0L2 795 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 WHRNQ9P202 907 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 MTRF1LQ9UGC7 380 aaKnown RBP12.98□□□□□ -0.33
VMP1-202ENST00000585847 OR12D3Q9UGF7 316 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 ZNF510Q9Y2H8 683 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 USP34Q70CQ2 3546 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 BCLAF3A2AJT9 711 aaKnown RBP12.97□□□□□ -0.33
VMP1-202ENST00000585847 WASH4PA8MWX3 477 aa12.97□□□□□ -0.33
VMP1-202ENST00000585847 SLC9A3R1O14745 358 aaPredicted RBP12.97□□□□□ -0.33
VMP1-202ENST00000585847 KRT10P13645 584 aa12.97□□□□□ -0.33
VMP1-202ENST00000585847 ITIH2P19823 946 aa12.97□□□□□ -0.33
VMP1-202ENST00000585847 TACR2P21452 398 aa12.97□□□□□ -0.33
VMP1-202ENST00000585847 IL4RP24394 825 aa12.97□□□□□ -0.33
VMP1-202ENST00000585847 PTGIRP43119 386 aa12.97□□□□□ -0.33
VMP1-202ENST00000585847 SOX9P48436 509 aa12.97□□□□□ -0.33
VMP1-202ENST00000585847 OTUD4Q01804 1114 aaKnown RBP12.97□□□□□ -0.33
VMP1-202ENST00000585847 C5orf22Q49AR2 442 aa12.97□□□□□ -0.33
VMP1-202ENST00000585847 MANEALQ5VSG8 457 aa12.97□□□□□ -0.33
VMP1-202ENST00000585847 KAZNQ674X7 775 aa12.97□□□□□ -0.33
VMP1-202ENST00000585847 DUPD1Q68J44 220 aa12.97□□□□□ -0.33
VMP1-202ENST00000585847 FBXL22Q6P050 247 aa12.97□□□□□ -0.33
VMP1-202ENST00000585847 CCNI2Q6ZMN8 369 aaPredicted RBP12.97□□□□□ -0.33
VMP1-202ENST00000585847 ALLCQ8N6M5 410 aa12.97□□□□□ -0.33
VMP1-202ENST00000585847 PCDH19Q8TAB3 1148 aa12.97□□□□□ -0.33
VMP1-202ENST00000585847 ACTL9Q8TC94 416 aa12.97□□□□□ -0.33
VMP1-202ENST00000585847 DNASE1L2Q92874 299 aa12.97□□□□□ -0.33
VMP1-202ENST00000585847 IRF7Q92985 503 aa12.97□□□□□ -0.33
VMP1-202ENST00000585847 FATE1Q969F0 183 aa12.97□□□□□ -0.33
VMP1-202ENST00000585847 IGSF8Q969P0 613 aa12.97□□□□□ -0.33
VMP1-202ENST00000585847 TBC1D31Q96DN5 1066 aa12.97□□□□□ -0.33
VMP1-202ENST00000585847 CCDC114Q96M63 670 aa12.97□□□□□ -0.33
VMP1-202ENST00000585847 KCTD15Q96SI1 283 aaPredicted RBP12.97□□□□□ -0.33
VMP1-202ENST00000585847 VAT1Q99536 393 aa12.97□□□□□ -0.33
VMP1-202ENST00000585847 ACBD3Q9H3P7 528 aa12.97□□□□□ -0.33
VMP1-202ENST00000585847 ARHGEF4Q9NR80 690 aa12.97□□□□□ -0.33
VMP1-202ENST00000585847 KLHL11Q9NVR0 708 aa12.97□□□□□ -0.33
VMP1-202ENST00000585847 CWC15Q9P013 229 aaKnown RBP12.97□□□□□ -0.33
VMP1-202ENST00000585847 CLEC4EQ9ULY5 219 aa12.97□□□□□ -0.33
VMP1-202ENST00000585847 ZNF148Q9UQR1 794 aa12.97□□□□□ -0.33
VMP1-202ENST00000585847 CHD5Q8TDI0 1954 aa12.97□□□□□ -0.33
VMP1-202ENST00000585847 ZFHX2Q9C0A1 2572 aaPredicted RBP12.96□□□□□ -0.33
VMP1-202ENST00000585847 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.96□□□□□ -0.33
VMP1-202ENST00000585847 KRBA1A5PL33 1030 aa12.96□□□□□ -0.33
VMP1-202ENST00000585847 H0Y858 1186 aa12.96□□□□□ -0.33
VMP1-202ENST00000585847 TTI1O43156 1089 aa12.96□□□□□ -0.33
VMP1-202ENST00000585847 HOXC11O43248 304 aaPredicted RBP12.96□□□□□ -0.33
VMP1-202ENST00000585847 TSPAN3O60637 253 aa12.96□□□□□ -0.33
VMP1-202ENST00000585847 NFATC1O95644 943 aa12.96□□□□□ -0.33
VMP1-202ENST00000585847 PENKP01210 267 aaPredicted RBP12.96□□□□□ -0.33
VMP1-202ENST00000585847 RBP3P10745 1247 aa12.96□□□□□ -0.33
VMP1-202ENST00000585847 HOXD9P28356 352 aaPredicted RBP12.96□□□□□ -0.33
VMP1-202ENST00000585847 GJA4P35212 333 aa12.96□□□□□ -0.33
VMP1-202ENST00000585847 OPRD1P41143 372 aa12.96□□□□□ -0.33
VMP1-202ENST00000585847 NUBP1P53384 320 aa12.96□□□□□ -0.33
VMP1-202ENST00000585847 EIF3EP60228 445 aaKnown RBP12.96□□□□□ -0.33
VMP1-202ENST00000585847 RPS24P62847 133 aaKnown RBP12.96□□□□□ -0.33
VMP1-202ENST00000585847 GUCY2DQ02846 1103 aa12.96□□□□□ -0.33
VMP1-202ENST00000585847 MESP2Q0VG99 397 aa12.96□□□□□ -0.33
VMP1-202ENST00000585847 AUHQ13825 339 aaKnown RBP12.96□□□□□ -0.33
VMP1-202ENST00000585847 P3H1Q32P28 736 aa12.96□□□□□ -0.33
VMP1-202ENST00000585847 AADACL2Q6P093 401 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms