RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 AP1B1Q10567 949 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 EFEMP1Q12805 493 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 TCF15Q12870 199 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 PDIA2Q13087 525 aaKnown RBP10.66□□□□□ -0.7
LIG3-203ENST00000585370 NR1H3Q13133 447 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 SEMA5AQ13591 1074 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 RASA2Q15283 850 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 TERF2Q15554 542 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 TAF12Q16514 161 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 CCDC38Q502W7 563 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 TTMPQ5BVD1 217 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 MANEALQ5VSG8 457 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 ITPRIPL1Q6GPH6 555 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 RTL10Q7L3V2 364 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 TDRPQ86YL5 185 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 PALM2Q8IXS6 379 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 FBXL6Q8N531 539 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 TTC9BQ8N6N2 239 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 ATP11CQ8NB49 1132 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 OR2W6PQ8NHA6 318 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 AUTS2Q8WXX7 1259 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 AZIN2Q96A70 460 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 P2RY11Q96G91 374 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 SIK2Q9H0K1 926 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 ZBP1Q9H171 429 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 POMKQ9H5K3 350 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 ETNK1Q9HBU6 452 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 ANLNQ9NQW6 1124 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 TMPRSS4Q9NRS4 437 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 OSER1Q9NX31 292 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 TRPM5Q9NZQ8 1165 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 IGSF9Q9P2J2 1179 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 DNMT3LQ9UJW3 386 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 SLC12A8A0AV02 714 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 C2CD4DB7Z1M9 353 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 E9PAM4 449 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 ADAM12O43184 909 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 CDH16O75309 829 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 C1RP00736 705 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 IGLV3-27P01718 113 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 CTSAP10619 480 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 RHOQP17081 205 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 ATF6P18850 670 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 GARSP41250 739 aaKnown RBP10.65□□□□□ -0.7
LIG3-203ENST00000585370 NDST2P52849 883 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 EPHB3P54753 998 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 PABPC1LQ4VXU2 614 aaKnown RBP10.65□□□□□ -0.7
LIG3-203ENST00000585370 HECTD3Q5T447 861 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 TIGD7Q6NT04 549 aaPredicted RBP10.65□□□□□ -0.7
LIG3-203ENST00000585370 CES5AQ6NT32 575 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 RWDD4Q6NW29 188 aaKnown RBP10.65□□□□□ -0.7
LIG3-203ENST00000585370 KDM7AQ6ZMT4 941 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 TAOK1Q7L7X3 1001 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 PID1Q7Z2X4 250 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 ITIH5Q86UX2 942 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 CCNJLQ8IV13 435 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 SUGP1Q8IWZ8 645 aaKnown RBP10.65□□□□□ -0.7
LIG3-203ENST00000585370 CCDC13Q8IYE1 715 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 ZBED8Q8IZ13 594 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 C12orf76Q8N812 135 aaPredicted RBP10.65□□□□□ -0.7
LIG3-203ENST00000585370 RTL3Q8N8U3 475 aaKnown RBP10.65□□□□□ -0.7
LIG3-203ENST00000585370 CCDC110Q8TBZ0 833 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 GIPC2Q8TF65 315 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 SLC22A17Q8WUG5 538 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 FATE1Q969F0 183 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 TLCD1Q96CP7 247 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 LGMNQ99538 433 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 CRISPLD1Q9H336 500 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 CENPHQ9H3R5 247 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 CNOT10Q9H9A5 744 aaKnown RBP10.65□□□□□ -0.7
LIG3-203ENST00000585370 CYP4F11Q9HBI6 524 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 BCCIPQ9P287 314 aaKnown RBP eCLIP10.65□□□□□ -0.7
LIG3-203ENST00000585370 SLC24A2Q9UI40 661 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 IRAK3Q9Y616 596 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 HS3ST4Q9Y661 456 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 PLXNA3P51805 1871 aa10.65□□□□□ -0.7
LIG3-203ENST00000585370 IGLV3-10A0A075B6K4 115 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.64□□□□□ -0.71
LIG3-203ENST00000585370 TLDC2A0PJX2 215 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 ZNF840PA6NDX5 716 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 DRGXA6NNA5 263 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 RNF103O00237 685 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 C2CD2LO14523 706 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 PRRG1O14668 218 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 TRDMT1O14717 391 aaKnown RBP10.64□□□□□ -0.71
LIG3-203ENST00000585370 MSI1O43347 362 aaKnown RBP10.64□□□□□ -0.71
LIG3-203ENST00000585370 TLR5O60602 858 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 LILRB3O75022 631 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 PDGFBP01127 241 aaPredicted RBP10.64□□□□□ -0.71
LIG3-203ENST00000585370 SHBGP04278 402 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 EPCAMP16422 314 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 RPL17P18621 184 aaKnown RBP10.64□□□□□ -0.71
LIG3-203ENST00000585370 NR1D1P20393 614 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 CA8P35219 290 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 MMP13P45452 471 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 LMAN1P49257 510 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 SLC11A2P49281 568 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 PGFP49763 221 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 PRPSAP1Q14558 356 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 KCTD19Q17RG1 926 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms