RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 C9orf64Q5T6V5 341 aa21.16■□□□□ 0.98
SRSF1-206ENST00000583741 LCLAT1Q6UWP7 414 aa21.16■□□□□ 0.98
SRSF1-206ENST00000583741 MMS22LQ6ZRQ5 1243 aa21.16■□□□□ 0.98
SRSF1-206ENST00000583741 TMPRSS12Q86WS5 348 aa21.16■□□□□ 0.98
SRSF1-206ENST00000583741 ARHGEF19Q8IW93 802 aa21.16■□□□□ 0.98
SRSF1-206ENST00000583741 UNC45BQ8IWX7 931 aa21.16■□□□□ 0.98
SRSF1-206ENST00000583741 CFAP46Q8IYW2 2715 aa21.16■□□□□ 0.98
SRSF1-206ENST00000583741 HJURPQ8NCD3 748 aaPredicted RBP21.16■□□□□ 0.98
SRSF1-206ENST00000583741 SHROOM3Q8TF72 1996 aa21.16■□□□□ 0.98
SRSF1-206ENST00000583741 SLC35F5Q8WV83 523 aa21.16■□□□□ 0.98
SRSF1-206ENST00000583741 BAP1Q92560 729 aa21.16■□□□□ 0.98
SRSF1-206ENST00000583741 PANX2Q96RD6 677 aa21.16■□□□□ 0.98
SRSF1-206ENST00000583741 DNAJC7Q99615 494 aa21.16■□□□□ 0.98
SRSF1-206ENST00000583741 NEUROG2Q9H2A3 272 aa21.16■□□□□ 0.98
SRSF1-206ENST00000583741 DNAJC12Q9UKB3 198 aa21.16■□□□□ 0.98
SRSF1-206ENST00000583741 PTPRQQ9UMZ3 2332 aa21.16■□□□□ 0.98
SRSF1-206ENST00000583741 LTFP02788 710 aa21.15■□□□□ 0.98
SRSF1-206ENST00000583741 CTSOP43234 321 aaPredicted RBP21.15■□□□□ 0.98
SRSF1-206ENST00000583741 TBX4P57082 545 aa21.15■□□□□ 0.98
SRSF1-206ENST00000583741 ST8SIA6P61647 398 aa21.15■□□□□ 0.98
SRSF1-206ENST00000583741 YWHAEP62258 255 aaKnown RBP21.15■□□□□ 0.98
SRSF1-206ENST00000583741 TSR1Q2NL82 804 aaKnown RBP21.15■□□□□ 0.98
SRSF1-206ENST00000583741 FSCBQ5H9T9 825 aa21.15■□□□□ 0.98
SRSF1-206ENST00000583741 RRAGAQ7L523 313 aa21.15■□□□□ 0.98
SRSF1-206ENST00000583741 MMAAQ8IVH4 418 aaKnown RBP21.15■□□□□ 0.98
SRSF1-206ENST00000583741 PPM1KQ8N3J5 372 aa21.15■□□□□ 0.98
SRSF1-206ENST00000583741 ZNF557Q8N988 423 aaPredicted RBP21.15■□□□□ 0.98
SRSF1-206ENST00000583741 OR8K1Q8NGG5 319 aa21.15■□□□□ 0.98
SRSF1-206ENST00000583741 SAP25Q8TEE9 199 aa21.15■□□□□ 0.98
SRSF1-206ENST00000583741 IRGQQ8WZA9 623 aa21.15■□□□□ 0.98
SRSF1-206ENST00000583741 FCRL2Q96LA5 508 aaPredicted RBP21.15■□□□□ 0.98
SRSF1-206ENST00000583741 SPAG5Q96R06 1193 aa21.15■□□□□ 0.98
SRSF1-206ENST00000583741 NAA15Q9BXJ9 866 aaKnown RBP21.15■□□□□ 0.98
SRSF1-206ENST00000583741 NUCKS1Q9H1E3 243 aaKnown RBP21.15■□□□□ 0.98
SRSF1-206ENST00000583741 UBE2TQ9NPD8 197 aaPredicted RBP21.15■□□□□ 0.98
SRSF1-206ENST00000583741 AJAP1Q9UKB5 411 aaPredicted RBP21.15■□□□□ 0.98
SRSF1-206ENST00000583741 ARID1BQ8NFD5 2236 aaPredicted RBP21.15■□□□□ 0.98
SRSF1-206ENST00000583741 FLNBO75369 2602 aaKnown RBP21.15■□□□□ 0.98
SRSF1-206ENST00000583741 LRRC53A6NM62 1247 aa21.14■□□□□ 0.98
SRSF1-206ENST00000583741 TTC34A8MYJ7 566 aa21.14■□□□□ 0.98
SRSF1-206ENST00000583741 ENC1O14682 589 aa21.14■□□□□ 0.98
SRSF1-206ENST00000583741 RNASEH2AO75792 299 aaKnown RBP21.14■□□□□ 0.98
SRSF1-206ENST00000583741 CALCAP01258 141 aa21.14■□□□□ 0.98
SRSF1-206ENST00000583741 HS1BP3Q53T59 392 aa21.14■□□□□ 0.98
SRSF1-206ENST00000583741 TMEM270Q6UE05 265 aa21.14■□□□□ 0.98
SRSF1-206ENST00000583741 CARNMT1Q8N4J0 409 aa21.14■□□□□ 0.98
SRSF1-206ENST00000583741 AZIN2Q96A70 460 aa21.14■□□□□ 0.98
SRSF1-206ENST00000583741 CNDP2Q96KP4 475 aaKnown RBP21.14■□□□□ 0.98
SRSF1-206ENST00000583741 AASDHPPTQ9NRN7 309 aa21.14■□□□□ 0.98
SRSF1-206ENST00000583741 ADAMTS1Q9UHI8 967 aa21.14■□□□□ 0.98
SRSF1-206ENST00000583741 KIAA1257Q9ULG3 409 aa21.14■□□□□ 0.98
SRSF1-206ENST00000583741 MYO6Q9UM54 1294 aa21.14■□□□□ 0.98
SRSF1-206ENST00000583741 ERVW-1Q9UQF0 538 aa21.14■□□□□ 0.98
SRSF1-206ENST00000583741 PCDHGA1Q9Y5H4 931 aa21.14■□□□□ 0.98
SRSF1-206ENST00000583741 A0A1W2PR77 199 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 E9PAM4 449 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 NRDCO43847 1150 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 RNASEH1O60930 286 aaKnown RBP21.13■□□□□ 0.97
SRSF1-206ENST00000583741 ASLP04424 464 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 FYNP06241 537 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 ABCG1P45844 678 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 GCNT1Q02742 428 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 PITRM1Q5JRX3 1037 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 CFAP52Q8N1V2 620 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 AADATQ8N5Z0 425 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 CCDC112Q8NEF3 446 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 OR2T34Q8NGX1 318 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 PIP4K2CQ8TBX8 421 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 FAM81BQ96LP2 452 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 ZNF830Q96NB3 372 aaPredicted RBP21.13■□□□□ 0.97
SRSF1-206ENST00000583741 STK33Q9BYT3 514 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 FZD4Q9ULV1 537 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 DOCK9Q9BZ29 2069 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 MGAQ8IWI9 3026 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 LRRC72A6NJI9 287 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 M0QYV0 167 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 LDOC1O95751 146 aaPredicted RBP21.13■□□□□ 0.97
SRSF1-206ENST00000583741 ITGAVP06756 1048 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 PAEPP09466 180 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 ABCB4P21439 1286 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 TBXAS1P24557 533 aaPredicted RBP21.13■□□□□ 0.97
SRSF1-206ENST00000583741 ITPKBP27987 946 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 CD38P28907 300 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 SLC8A1P32418 973 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 JAM2P57087 298 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 CDH18Q13634 790 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 ARHGAP44Q17R89 818 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 MS4A13Q5J8X5 152 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 KDM1BQ8NB78 822 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 DQX1Q8TE96 717 aaKnown RBP21.13■□□□□ 0.97
SRSF1-206ENST00000583741 NXPE2Q96DL1 559 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 FAM129BQ96TA1 746 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 OMDQ99983 421 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 KCNF1Q9H3M0 494 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 SLCO3A1Q9UIG8 710 aa21.13■□□□□ 0.97
SRSF1-206ENST00000583741 ASH1LQ9NR48 2969 aaKnown RBP21.12■□□□□ 0.97
SRSF1-206ENST00000583741 EIF4E1BA6NMX2 242 aaKnown RBP21.12■□□□□ 0.97
SRSF1-206ENST00000583741 F8VZ95 297 aa21.12■□□□□ 0.97
SRSF1-206ENST00000583741 RFPL3O75679 317 aa21.12■□□□□ 0.97
SRSF1-206ENST00000583741 BRD2P25440 801 aaKnown RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms