RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 ADRA1BP35368 520 aa20.03■□□□□ 0.8
SREBF1-220ENST00000581707 VASPP50552 380 aaPredicted RBP20.03■□□□□ 0.8
SREBF1-220ENST00000581707 GFPT1Q06210 699 aaPredicted RBP20.03■□□□□ 0.8
SREBF1-220ENST00000581707 ASIC2Q16515 512 aa20.03■□□□□ 0.8
SREBF1-220ENST00000581707 ARL13BQ3SXY8 428 aa20.03■□□□□ 0.8
SREBF1-220ENST00000581707 PPM1JQ5JR12 505 aa20.03■□□□□ 0.8
SREBF1-220ENST00000581707 DCAF12L1Q5VU92 463 aa20.03■□□□□ 0.8
SREBF1-220ENST00000581707 DAB2IPQ5VWQ8 1189 aa20.03■□□□□ 0.8
SREBF1-220ENST00000581707 WDR59Q6PJI9 974 aa20.03■□□□□ 0.8
SREBF1-220ENST00000581707 LRSAM1Q6UWE0 723 aa20.03■□□□□ 0.8
SREBF1-220ENST00000581707 STRADAQ7RTN6 431 aa20.03■□□□□ 0.8
SREBF1-220ENST00000581707 TFAP2DQ7Z6R9 452 aa20.03■□□□□ 0.8
SREBF1-220ENST00000581707 SETD3Q86TU7 594 aaPredicted RBP20.03■□□□□ 0.8
SREBF1-220ENST00000581707 MMAAQ8IVH4 418 aaKnown RBP20.03■□□□□ 0.8
SREBF1-220ENST00000581707 STK40Q8N2I9 435 aa20.03■□□□□ 0.8
SREBF1-220ENST00000581707 GANCQ8TET4 914 aa20.03■□□□□ 0.8
SREBF1-220ENST00000581707 CENPIQ92674 756 aaPredicted RBP20.03■□□□□ 0.8
SREBF1-220ENST00000581707 SYT11Q9BT88 431 aa20.03■□□□□ 0.8
SREBF1-220ENST00000581707 BTBD1Q9H0C5 482 aa20.03■□□□□ 0.8
SREBF1-220ENST00000581707 PABPC3Q9H361 631 aaKnown RBP20.03■□□□□ 0.8
SREBF1-220ENST00000581707 CAPN10Q9HC96 672 aa20.03■□□□□ 0.8
SREBF1-220ENST00000581707 AIPL1Q9NZN9 384 aa20.03■□□□□ 0.8
SREBF1-220ENST00000581707 SLC25A13Q9UJS0 675 aa20.03■□□□□ 0.8
SREBF1-220ENST00000581707 NCKAP1Q9Y2A7 1128 aa20.03■□□□□ 0.8
SREBF1-220ENST00000581707 ADAMTS9Q9P2N4 1935 aa20.03■□□□□ 0.8
SREBF1-220ENST00000581707 CACNA1EQ15878 2313 aa20.02■□□□□ 0.8
SREBF1-220ENST00000581707 SEMA4FO95754 770 aa20.02■□□□□ 0.8
SREBF1-220ENST00000581707 GPD1P21695 349 aa20.02■□□□□ 0.8
SREBF1-220ENST00000581707 OR1E1P30953 314 aa20.02■□□□□ 0.8
SREBF1-220ENST00000581707 MAPK8P45983 427 aa20.02■□□□□ 0.8
SREBF1-220ENST00000581707 FANCCQ00597 558 aa20.02■□□□□ 0.8
SREBF1-220ENST00000581707 SFSWAPQ12872 951 aaKnown RBP20.02■□□□□ 0.8
SREBF1-220ENST00000581707 CST6Q15828 149 aa20.02■□□□□ 0.8
SREBF1-220ENST00000581707 ACCSLQ4AC99 568 aa20.02■□□□□ 0.8
SREBF1-220ENST00000581707 ARTNQ5T4W7 220 aa20.02■□□□□ 0.8
SREBF1-220ENST00000581707 C6orf118Q5T5N4 469 aa20.02■□□□□ 0.8
SREBF1-220ENST00000581707 SFMBT2Q5VUG0 894 aa20.02■□□□□ 0.8
SREBF1-220ENST00000581707 DNAJC24Q6P3W2 148 aa20.02■□□□□ 0.8
SREBF1-220ENST00000581707 USP30Q70CQ3 517 aa20.02■□□□□ 0.8
SREBF1-220ENST00000581707 MCOLN2Q8IZK6 566 aa20.02■□□□□ 0.8
SREBF1-220ENST00000581707 FRS2Q8WU20 508 aa20.02■□□□□ 0.8
SREBF1-220ENST00000581707 FAM172AQ8WUF8 416 aa20.02■□□□□ 0.8
SREBF1-220ENST00000581707 EDEM3Q9BZQ6 932 aa20.02■□□□□ 0.8
SREBF1-220ENST00000581707 MIR1-1HGQ9H1L0 117 aa20.02■□□□□ 0.8
SREBF1-220ENST00000581707 C6orf106Q9H6K1 298 aaPredicted RBP20.02■□□□□ 0.8
SREBF1-220ENST00000581707 SGK2Q9HBY8 427 aa20.02■□□□□ 0.8
SREBF1-220ENST00000581707 FSCN3Q9NQT6 498 aa20.02■□□□□ 0.8
SREBF1-220ENST00000581707 FBXL12Q9NXK8 326 aa20.02■□□□□ 0.8
SREBF1-220ENST00000581707 NYNRINQ9P2P1 1898 aaKnown RBP20.01■□□□□ 0.79
SREBF1-220ENST00000581707 TCRBV5S1A1TA0A578 114 aa20.01■□□□□ 0.79
SREBF1-220ENST00000581707 ANKRD62A6NC57 917 aa20.01■□□□□ 0.79
SREBF1-220ENST00000581707 GOLGA6L19H0YKK7 550 aa20.01■□□□□ 0.79
SREBF1-220ENST00000581707 MID1O15344 667 aa20.01■□□□□ 0.79
SREBF1-220ENST00000581707 ATP9BO43861 1147 aa20.01■□□□□ 0.79
SREBF1-220ENST00000581707 VAV1P15498 845 aa20.01■□□□□ 0.79
SREBF1-220ENST00000581707 SLC8A1P32418 973 aa20.01■□□□□ 0.79
SREBF1-220ENST00000581707 ATXN3P54252 364 aaPredicted RBP20.01■□□□□ 0.79
SREBF1-220ENST00000581707 HDAC4P56524 1084 aa20.01■□□□□ 0.79
SREBF1-220ENST00000581707 KRT83P78385 493 aa20.01■□□□□ 0.79
SREBF1-220ENST00000581707 ELAVL3Q14576 367 aaKnown RBP20.01■□□□□ 0.79
SREBF1-220ENST00000581707 SKOR2Q2VWA4 1001 aaPredicted RBP20.01■□□□□ 0.79
SREBF1-220ENST00000581707 ZSCAN23Q3MJ62 389 aa20.01■□□□□ 0.79
SREBF1-220ENST00000581707 PPP1R2P3Q6NXS1 205 aa20.01■□□□□ 0.79
SREBF1-220ENST00000581707 C2orf49Q9BVC5 232 aaPredicted RBP20.01■□□□□ 0.79
SREBF1-220ENST00000581707 ZYG11BQ9C0D3 744 aa20.01■□□□□ 0.79
SREBF1-220ENST00000581707 OSBPL2Q9H1P3 480 aa20.01■□□□□ 0.79
SREBF1-220ENST00000581707 HAUS4Q9H6D7 363 aa20.01■□□□□ 0.79
SREBF1-220ENST00000581707 TAS2R14Q9NYV8 317 aa20.01■□□□□ 0.79
SREBF1-220ENST00000581707 PPARGC1AQ9UBK2 798 aaKnown RBP20.01■□□□□ 0.79
SREBF1-220ENST00000581707 OR12D3Q9UGF7 316 aa20.01■□□□□ 0.79
SREBF1-220ENST00000581707 ASCC3Q8N3C0 2202 aaKnown RBP20■□□□□ 0.79
SREBF1-220ENST00000581707 A0A0D9SEW6 157 aa20■□□□□ 0.79
SREBF1-220ENST00000581707 A0A1B0GTW7 788 aa20■□□□□ 0.79
SREBF1-220ENST00000581707 SYPP08247 313 aa20■□□□□ 0.79
SREBF1-220ENST00000581707 KCNA4P22459 653 aa20■□□□□ 0.79
SREBF1-220ENST00000581707 NRG1Q02297 640 aaPredicted RBP20■□□□□ 0.79
SREBF1-220ENST00000581707 DLG2Q15700 870 aa20■□□□□ 0.79
SREBF1-220ENST00000581707 UAP1L1Q3KQV9 507 aa20■□□□□ 0.79
SREBF1-220ENST00000581707 SH2D3CQ8N5H7 860 aa20■□□□□ 0.79
SREBF1-220ENST00000581707 VCPIP1Q96JH7 1222 aa20■□□□□ 0.79
SREBF1-220ENST00000581707 MCEEQ96PE7 176 aa20■□□□□ 0.79
SREBF1-220ENST00000581707 PSMB7Q99436 277 aa20■□□□□ 0.79
SREBF1-220ENST00000581707 OMDQ99983 421 aa20■□□□□ 0.79
SREBF1-220ENST00000581707 GTPBP2Q9BX10 602 aaKnown RBP20■□□□□ 0.79
SREBF1-220ENST00000581707 TTYH3Q9C0H2 523 aa20■□□□□ 0.79
SREBF1-220ENST00000581707 EIF2B4Q9UI10 523 aaKnown RBP20■□□□□ 0.79
SREBF1-220ENST00000581707 VPS51Q9UID3 782 aa20■□□□□ 0.79
SREBF1-220ENST00000581707 HS3ST2Q9Y278 367 aa20■□□□□ 0.79
SREBF1-220ENST00000581707 PCDH15Q96QU1 1955 aa19.99■□□□□ 0.79
SREBF1-220ENST00000581707 A0A1W2PP55 124 aa19.99■□□□□ 0.79
SREBF1-220ENST00000581707 ILVBLA1L0T0 632 aa19.99■□□□□ 0.79
SREBF1-220ENST00000581707 TMCO5BA8MYB1 307 aa19.99■□□□□ 0.79
SREBF1-220ENST00000581707 ARHGAP33O14559 1287 aa19.99■□□□□ 0.79
SREBF1-220ENST00000581707 SNAP91O60641 907 aa19.99■□□□□ 0.79
SREBF1-220ENST00000581707 ADH1BP00325 375 aa19.99■□□□□ 0.79
SREBF1-220ENST00000581707 MT-CO1P00395 513 aa19.99■□□□□ 0.79
SREBF1-220ENST00000581707 IL1BP01584 269 aa19.99■□□□□ 0.79
SREBF1-220ENST00000581707 C5AR1P21730 350 aa19.99■□□□□ 0.79
SREBF1-220ENST00000581707 RRM1P23921 792 aa19.99■□□□□ 0.79
SREBF1-220ENST00000581707 PRKCIP41743 596 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms