RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 CERS4Q9HA82 394 aa3.77□□□□□ -1.81
SMCHD1-206ENST00000581631 SDF2L1Q9HCN8 221 aa3.77□□□□□ -1.81
SMCHD1-206ENST00000581631 FNIP2Q9P278 1114 aa3.77□□□□□ -1.81
SMCHD1-206ENST00000581631 PHTF1Q9UMS5 762 aa3.77□□□□□ -1.81
SMCHD1-206ENST00000581631 UBE2J1Q9Y385 318 aaPredicted RBP3.77□□□□□ -1.81
SMCHD1-206ENST00000581631 CEP83Q9Y592 693 aa3.77□□□□□ -1.81
SMCHD1-206ENST00000581631 PCDHGB2Q9Y5G2 931 aa3.77□□□□□ -1.81
SMCHD1-206ENST00000581631 TRBV5-7A0A0A0MS05 114 aa3.76□□□□□ -1.81
SMCHD1-206ENST00000581631 KCNJ18B7U540 433 aa3.76□□□□□ -1.81
SMCHD1-206ENST00000581631 NPC1O15118 1278 aa3.76□□□□□ -1.81
SMCHD1-206ENST00000581631 IGLV2-11P01706 119 aa3.76□□□□□ -1.81
SMCHD1-206ENST00000581631 MYL1P05976 194 aa3.76□□□□□ -1.81
SMCHD1-206ENST00000581631 SNRNP70P08621 437 aaKnown RBP3.76□□□□□ -1.81
SMCHD1-206ENST00000581631 TBX4P57082 545 aa3.76□□□□□ -1.81
SMCHD1-206ENST00000581631 POU3F1Q03052 451 aaPredicted RBP3.76□□□□□ -1.81
SMCHD1-206ENST00000581631 NSUN2Q08J23 767 aaKnown RBP eCLIP3.76□□□□□ -1.81
SMCHD1-206ENST00000581631 MAPKAPK3Q16644 382 aa3.76□□□□□ -1.81
SMCHD1-206ENST00000581631 H1FNTQ75WM6 255 aaPredicted RBP3.76□□□□□ -1.81
SMCHD1-206ENST00000581631 ZNF367Q7RTV3 350 aa3.76□□□□□ -1.81
SMCHD1-206ENST00000581631 C11orf96Q7Z7L8 435 aa3.76□□□□□ -1.81
SMCHD1-206ENST00000581631 SLC25A41Q8N5S1 370 aa3.76□□□□□ -1.81
SMCHD1-206ENST00000581631 NEXN-AS1Q8NBZ9 246 aa3.76□□□□□ -1.81
SMCHD1-206ENST00000581631 BRI3BPQ8WY22 251 aa3.76□□□□□ -1.81
SMCHD1-206ENST00000581631 KIAA1191Q96A73 305 aa3.76□□□□□ -1.81
SMCHD1-206ENST00000581631 CCDC138Q96M89 665 aa3.76□□□□□ -1.81
SMCHD1-206ENST00000581631 EIF3CQ99613 913 aaKnown RBP3.76□□□□□ -1.81
SMCHD1-206ENST00000581631 EIF2AQ9BY44 585 aaKnown RBP3.76□□□□□ -1.81
SMCHD1-206ENST00000581631 POLDIP3Q9BY77 421 aaKnown RBP3.76□□□□□ -1.81
SMCHD1-206ENST00000581631 ARNT2Q9HBZ2 717 aa3.76□□□□□ -1.81
SMCHD1-206ENST00000581631 FSCN3Q9NQT6 498 aa3.76□□□□□ -1.81
SMCHD1-206ENST00000581631 PCDHB7Q9Y5E2 793 aa3.76□□□□□ -1.81
SMCHD1-206ENST00000581631 PLSCR5A0PG75 271 aa3.75□□□□□ -1.81
SMCHD1-206ENST00000581631 PRR23AA6NEV1 266 aa3.75□□□□□ -1.81
SMCHD1-206ENST00000581631 J3KTA2 159 aa3.75□□□□□ -1.81
SMCHD1-206ENST00000581631 SOX30O94993 753 aa3.75□□□□□ -1.81
SMCHD1-206ENST00000581631 GNLYP22749 145 aa3.75□□□□□ -1.81
SMCHD1-206ENST00000581631 TNFSF8P32971 234 aa3.75□□□□□ -1.81
SMCHD1-206ENST00000581631 AK2P54819 239 aa3.75□□□□□ -1.81
SMCHD1-206ENST00000581631 GRSF1Q12849 480 aaKnown RBP eCLIP3.75□□□□□ -1.81
SMCHD1-206ENST00000581631 PICALMQ13492 652 aa3.75□□□□□ -1.81
SMCHD1-206ENST00000581631 MPEG1Q2M385 716 aa3.75□□□□□ -1.81
SMCHD1-206ENST00000581631 KIF19Q2TAC6 998 aa3.75□□□□□ -1.81
SMCHD1-206ENST00000581631 IZUMO3Q5VZ72 239 aa3.75□□□□□ -1.81
SMCHD1-206ENST00000581631 RASGRP3Q8IV61 690 aa3.75□□□□□ -1.81
SMCHD1-206ENST00000581631 SRFBP1Q8NEF9 429 aaKnown RBP3.75□□□□□ -1.81
SMCHD1-206ENST00000581631 BICD2Q8TD16 824 aa3.75□□□□□ -1.81
SMCHD1-206ENST00000581631 IP6K1Q92551 441 aa3.75□□□□□ -1.81
SMCHD1-206ENST00000581631 WBP2Q969T9 261 aa3.75□□□□□ -1.81
SMCHD1-206ENST00000581631 C18orf8Q96DM3 657 aa3.75□□□□□ -1.81
SMCHD1-206ENST00000581631 NODALQ96S42 347 aa3.75□□□□□ -1.81
SMCHD1-206ENST00000581631 SORBS1Q9BX66 1292 aaKnown RBP3.75□□□□□ -1.81
SMCHD1-206ENST00000581631 EPS8L2Q9H6S3 715 aa3.75□□□□□ -1.81
SMCHD1-206ENST00000581631 CATSPERBQ9H7T0 1116 aa3.75□□□□□ -1.81
SMCHD1-206ENST00000581631 ZNF304Q9HCX3 659 aa3.75□□□□□ -1.81
SMCHD1-206ENST00000581631 LOC102724159A0A0B4J2E5 919 aa3.74□□□□□ -1.81
SMCHD1-206ENST00000581631 BMPR1BO00238 502 aa3.74□□□□□ -1.81
SMCHD1-206ENST00000581631 ITGA5P08648 1049 aa3.74□□□□□ -1.81
SMCHD1-206ENST00000581631 SLC16A2P36021 539 aa3.74□□□□□ -1.81
SMCHD1-206ENST00000581631 HSPA7P48741 367 aa3.74□□□□□ -1.81
SMCHD1-206ENST00000581631 CBFBQ13951 182 aa3.74□□□□□ -1.81
SMCHD1-206ENST00000581631 PWP2Q15269 919 aaKnown RBP3.74□□□□□ -1.81
SMCHD1-206ENST00000581631 RAB30Q15771 203 aa3.74□□□□□ -1.81
SMCHD1-206ENST00000581631 ALG10Q5BKT4 473 aa3.74□□□□□ -1.81
SMCHD1-206ENST00000581631 ALG10BQ5I7T1 473 aa3.74□□□□□ -1.81
SMCHD1-206ENST00000581631 WDR93Q6P2C0 686 aa3.74□□□□□ -1.81
SMCHD1-206ENST00000581631 ZNF449Q6P9G9 518 aa3.74□□□□□ -1.81
SMCHD1-206ENST00000581631 ZNF771Q7L3S4 317 aaPredicted RBP3.74□□□□□ -1.81
SMCHD1-206ENST00000581631 KRT27Q7Z3Y8 459 aa3.74□□□□□ -1.81
SMCHD1-206ENST00000581631 SRLQ86TD4 932 aa3.74□□□□□ -1.81
SMCHD1-206ENST00000581631 ADPRHL1Q8NDY3 354 aa3.74□□□□□ -1.81
SMCHD1-206ENST00000581631 IPO4Q8TEX9 1081 aaKnown RBP3.74□□□□□ -1.81
SMCHD1-206ENST00000581631 FAM216AQ8WUB2 273 aa3.74□□□□□ -1.81
SMCHD1-206ENST00000581631 SLC22A17Q8WUG5 538 aa3.74□□□□□ -1.81
SMCHD1-206ENST00000581631 ZNF419Q96HQ0 510 aaPredicted RBP3.74□□□□□ -1.81
SMCHD1-206ENST00000581631 APOLD1Q96LR9 279 aa3.74□□□□□ -1.81
SMCHD1-206ENST00000581631 DUX5Q96PT3 197 aa3.74□□□□□ -1.81
SMCHD1-206ENST00000581631 MYD88Q99836 296 aa3.74□□□□□ -1.81
SMCHD1-206ENST00000581631 FRMD8Q9BZ67 464 aaPredicted RBP3.74□□□□□ -1.81
SMCHD1-206ENST00000581631 B3GNT4Q9C0J1 378 aa3.74□□□□□ -1.81
SMCHD1-206ENST00000581631 KLHL31Q9H511 634 aa3.74□□□□□ -1.81
SMCHD1-206ENST00000581631 RETREG1Q9H6L5 497 aa3.74□□□□□ -1.81
SMCHD1-206ENST00000581631 FBXO28Q9NVF7 368 aa3.74□□□□□ -1.81
SMCHD1-206ENST00000581631 MMP24Q9Y5R2 645 aa3.74□□□□□ -1.81
SMCHD1-206ENST00000581631 LOC105369274A0A096LPK9 316 aa3.73□□□□□ -1.81
SMCHD1-206ENST00000581631 LOC102723532A0A0G2JNH3 316 aa3.73□□□□□ -1.81
SMCHD1-206ENST00000581631 PNMA6EA0A0J9YXQ4 647 aa3.73□□□□□ -1.81
SMCHD1-206ENST00000581631 A0A1B0GVY2 172 aa3.73□□□□□ -1.81
SMCHD1-206ENST00000581631 MS4A18H0YCH9 400 aa3.73□□□□□ -1.81
SMCHD1-206ENST00000581631 PCDH17O14917 1159 aa3.73□□□□□ -1.81
SMCHD1-206ENST00000581631 NKX2-8O15522 239 aa3.73□□□□□ -1.81
SMCHD1-206ENST00000581631 MSI1O43347 362 aaKnown RBP3.73□□□□□ -1.81
SMCHD1-206ENST00000581631 TAF5LO75529 589 aa3.73□□□□□ -1.81
SMCHD1-206ENST00000581631 PAK4O96013 591 aaPredicted RBP3.73□□□□□ -1.81
SMCHD1-206ENST00000581631 F7P08709 466 aaPredicted RBP3.73□□□□□ -1.81
SMCHD1-206ENST00000581631 ALDOCP09972 364 aaKnown RBP3.73□□□□□ -1.81
SMCHD1-206ENST00000581631 ABCB4P21439 1286 aa3.73□□□□□ -1.81
SMCHD1-206ENST00000581631 GLIPR1P48060 266 aa3.73□□□□□ -1.81
SMCHD1-206ENST00000581631 BNC1Q01954 994 aa3.73□□□□□ -1.81
SMCHD1-206ENST00000581631 TRAF2Q12933 501 aa3.73□□□□□ -1.81
SMCHD1-206ENST00000581631 PKP1Q13835 747 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms