RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 C4orf47A7E2U8 309 aa10□□□□□ -0.81
TOP3A-211ENST00000581536 SMTNL1A8MU46 457 aa10□□□□□ -0.81
TOP3A-211ENST00000581536 CDX4O14627 284 aaPredicted RBP10□□□□□ -0.81
TOP3A-211ENST00000581536 SLC30A4O14863 429 aa10□□□□□ -0.81
TOP3A-211ENST00000581536 KHNYNO15037 678 aaKnown RBP10□□□□□ -0.81
TOP3A-211ENST00000581536 NDUFS2O75306 463 aa10□□□□□ -0.81
TOP3A-211ENST00000581536 ZNF217O75362 1048 aa10□□□□□ -0.81
TOP3A-211ENST00000581536 SLC2A3P11169 496 aa10□□□□□ -0.81
TOP3A-211ENST00000581536 VAV1P15498 845 aa10□□□□□ -0.81
TOP3A-211ENST00000581536 MMP8P22894 467 aa10□□□□□ -0.81
TOP3A-211ENST00000581536 ZNF165P49910 485 aa10□□□□□ -0.81
TOP3A-211ENST00000581536 RPS14P62263 151 aaKnown RBP10□□□□□ -0.81
TOP3A-211ENST00000581536 ATP11AP98196 1134 aa10□□□□□ -0.81
TOP3A-211ENST00000581536 CDH18Q13634 790 aa10□□□□□ -0.81
TOP3A-211ENST00000581536 SLC25A52Q3SY17 297 aa10□□□□□ -0.81
TOP3A-211ENST00000581536 ALFQ53S48 1182 aa10□□□□□ -0.81
TOP3A-211ENST00000581536 CXorf57Q6NSI4 855 aaKnown RBP10□□□□□ -0.81
TOP3A-211ENST00000581536 SLC36A4Q6YBV0 504 aa10□□□□□ -0.81
TOP3A-211ENST00000581536 IRF2BP2Q7Z5L9 587 aa10□□□□□ -0.81
TOP3A-211ENST00000581536 C11orf74Q86VG3 221 aa10□□□□□ -0.81
TOP3A-211ENST00000581536 ZNF677Q86XU0 584 aa10□□□□□ -0.81
TOP3A-211ENST00000581536 ZNF683Q8IZ20 524 aa10□□□□□ -0.81
TOP3A-211ENST00000581536 ANKRD20A12PQ8NF67 263 aa10□□□□□ -0.81
TOP3A-211ENST00000581536 OR2T3Q8NH03 318 aa10□□□□□ -0.81
TOP3A-211ENST00000581536 NETO1Q8TDF5 533 aa10□□□□□ -0.81
TOP3A-211ENST00000581536 RXFP2Q8WXD0 754 aa10□□□□□ -0.81
TOP3A-211ENST00000581536 PRCCQ92733 491 aaPredicted RBP10□□□□□ -0.81
TOP3A-211ENST00000581536 ALG14Q96F25 216 aa10□□□□□ -0.81
TOP3A-211ENST00000581536 ZNF419Q96HQ0 510 aaPredicted RBP10□□□□□ -0.81
TOP3A-211ENST00000581536 HSPA12BQ96MM6 686 aa10□□□□□ -0.81
TOP3A-211ENST00000581536 RPRD1AQ96P16 312 aaPredicted RBP10□□□□□ -0.81
TOP3A-211ENST00000581536 AGPAT1Q99943 283 aa10□□□□□ -0.81
TOP3A-211ENST00000581536 C11orf70Q9BRQ4 267 aa10□□□□□ -0.81
TOP3A-211ENST00000581536 RTKNQ9BST9 563 aa10□□□□□ -0.81
TOP3A-211ENST00000581536 NAT10Q9H0A0 1025 aaKnown RBP10□□□□□ -0.81
TOP3A-211ENST00000581536 METTL5Q9NRN9 209 aaKnown RBP10□□□□□ -0.81
TOP3A-211ENST00000581536 USP36Q9P275 1121 aaKnown RBP10□□□□□ -0.81
TOP3A-211ENST00000581536 SUN2Q9UH99 717 aa10□□□□□ -0.81
TOP3A-211ENST00000581536 PCDHB9Q9Y5E1 797 aa10□□□□□ -0.81
TOP3A-211ENST00000581536 TP53BP1Q12888 1972 aaPredicted RBP9.99□□□□□ -0.81
TOP3A-211ENST00000581536 CHD5Q8TDI0 1954 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 PCDH15Q96QU1 1955 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 KNL1Q8NG31 2342 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 LNP1A1A4G5 178 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 TYW5A2RUC4 315 aaKnown RBP9.99□□□□□ -0.81
TOP3A-211ENST00000581536 AP5Z1O43299 807 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 SRGAP2O75044 1071 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 SIN3BO75182 1162 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 LSM8O95777 96 aaKnown RBP9.99□□□□□ -0.81
TOP3A-211ENST00000581536 CD6P30203 668 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 ACSL1P33121 698 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 ECT2LQ008S8 904 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 NR1I3Q14994 352 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 CDO1Q16878 200 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 CLEC16AQ2KHT3 1053 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 PLEKHG6Q3KR16 790 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 CCDC14Q49A88 953 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 C5orf22Q49AR2 442 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 TRIM61Q5EBN2 209 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 SPDYCQ5MJ68 293 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 C9orf64Q5T6V5 341 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 RNF219Q5W0B1 726 aaPredicted RBP9.99□□□□□ -0.81
TOP3A-211ENST00000581536 LYSMD4Q5XG99 296 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 BNIPLQ7Z465 357 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 LUZP1Q86V48 1076 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 SYT12Q8IV01 421 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 RGL4Q8IZJ4 473 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 OR2I1PQ8NGU4 316 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 PTPRN2Q92932 1015 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 PGAP3Q96FM1 320 aaPredicted RBP9.99□□□□□ -0.81
TOP3A-211ENST00000581536 POM121Q96HA1 1249 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 FAM129BQ96TA1 746 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 FEM1AQ9BSK4 669 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 CBX8Q9HC52 389 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 SEPT11Q9NVA2 429 aaKnown RBP9.99□□□□□ -0.81
TOP3A-211ENST00000581536 RRN3Q9NYV6 651 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 TAS2R14Q9NYV8 317 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 MPP6Q9NZW5 540 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 ADAM22Q9P0K1 906 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 OR51B4Q9Y5P0 310 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 SLCO1B1Q9Y6L6 691 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 SPTBN2O15020 2390 aa9.99□□□□□ -0.81
TOP3A-211ENST00000581536 SPEGQ15772 3267 aa9.98□□□□□ -0.81
TOP3A-211ENST00000581536 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.98□□□□□ -0.81
TOP3A-211ENST00000581536 DRGXA6NNA5 263 aa9.98□□□□□ -0.81
TOP3A-211ENST00000581536 TMCO5BA8MYB1 307 aa9.98□□□□□ -0.81
TOP3A-211ENST00000581536 ENDOD1O94919 500 aa9.98□□□□□ -0.81
TOP3A-211ENST00000581536 MT-CO1P00395 513 aa9.98□□□□□ -0.81
TOP3A-211ENST00000581536 F9P00740 461 aa9.98□□□□□ -0.81
TOP3A-211ENST00000581536 SRPRAP08240 638 aaKnown RBP9.98□□□□□ -0.81
TOP3A-211ENST00000581536 ACADMP11310 421 aa9.98□□□□□ -0.81
TOP3A-211ENST00000581536 SKILP12757 684 aa9.98□□□□□ -0.81
TOP3A-211ENST00000581536 SDHBP21912 280 aa9.98□□□□□ -0.81
TOP3A-211ENST00000581536 RFC1P35251 1148 aaPredicted RBP9.98□□□□□ -0.81
TOP3A-211ENST00000581536 SCNN1AP37088 669 aa9.98□□□□□ -0.81
TOP3A-211ENST00000581536 PLK1P53350 603 aa9.98□□□□□ -0.81
TOP3A-211ENST00000581536 METAP1P53582 386 aa9.98□□□□□ -0.81
TOP3A-211ENST00000581536 ZNF177Q13360 481 aaPredicted RBP9.98□□□□□ -0.81
TOP3A-211ENST00000581536 KLHL40Q2TBA0 621 aa9.98□□□□□ -0.81
TOP3A-211ENST00000581536 HNRNPA1L2Q32P51 320 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms