RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 PMPCAQ10713 525 aa5□□□□□ -1.61
SMCHD1-204ENST00000581226 THOC5Q13769 683 aaKnown RBP5□□□□□ -1.61
SMCHD1-204ENST00000581226 SMTNL2Q2TAL5 461 aa5□□□□□ -1.61
SMCHD1-204ENST00000581226 CTXN3Q4LDR2 81 aa5□□□□□ -1.61
SMCHD1-204ENST00000581226 TTC39AQ5SRH9 613 aa5□□□□□ -1.61
SMCHD1-204ENST00000581226 RNF144BQ7Z419 303 aa5□□□□□ -1.61
SMCHD1-204ENST00000581226 PIP4P1Q86T03 277 aa5□□□□□ -1.61
SMCHD1-204ENST00000581226 SCN4BQ8IWT1 228 aa5□□□□□ -1.61
SMCHD1-204ENST00000581226 EXOC8Q8IYI6 725 aa5□□□□□ -1.61
SMCHD1-204ENST00000581226 ARFGAP1Q8N6T3 406 aa5□□□□□ -1.61
SMCHD1-204ENST00000581226 TMEM217Q8N7C4 229 aa5□□□□□ -1.61
SMCHD1-204ENST00000581226 NRACQ8N912 160 aa5□□□□□ -1.61
SMCHD1-204ENST00000581226 PYM1Q9BRP8 204 aaKnown RBP5□□□□□ -1.61
SMCHD1-204ENST00000581226 ACAD9Q9H845 621 aa5□□□□□ -1.61
SMCHD1-204ENST00000581226 IL21RQ9HBE5 538 aa5□□□□□ -1.61
SMCHD1-204ENST00000581226 NOD2Q9HC29 1040 aa5□□□□□ -1.61
SMCHD1-204ENST00000581226 ZNF304Q9HCX3 659 aa5□□□□□ -1.61
SMCHD1-204ENST00000581226 TMEM248Q9NWD8 314 aa5□□□□□ -1.61
SMCHD1-204ENST00000581226 COG5Q9UP83 839 aa5□□□□□ -1.61
SMCHD1-204ENST00000581226 SETD1BQ9UPS6 1966 aaKnown RBP5□□□□□ -1.61
SMCHD1-204ENST00000581226 A0A1W2PPC1 479 aa4.99□□□□□ -1.61
SMCHD1-204ENST00000581226 ZNF814B7Z6K7 855 aa4.99□□□□□ -1.61
SMCHD1-204ENST00000581226 NEURL1O76050 574 aa4.99□□□□□ -1.61
SMCHD1-204ENST00000581226 HLA-DQA2P01906 255 aa4.99□□□□□ -1.61
SMCHD1-204ENST00000581226 KLRC2P26717 231 aa4.99□□□□□ -1.61
SMCHD1-204ENST00000581226 TYK2P29597 1187 aa4.99□□□□□ -1.61
SMCHD1-204ENST00000581226 CCT5P48643 541 aa4.99□□□□□ -1.61
SMCHD1-204ENST00000581226 GAD2Q05329 585 aa4.99□□□□□ -1.61
SMCHD1-204ENST00000581226 BIRC3Q13489 604 aa4.99□□□□□ -1.61
SMCHD1-204ENST00000581226 SEMA3AQ14563 771 aa4.99□□□□□ -1.61
SMCHD1-204ENST00000581226 PIK3CD-AS1Q5SR53 167 aa4.99□□□□□ -1.61
SMCHD1-204ENST00000581226 C6orf10Q5SRN2 563 aa4.99□□□□□ -1.61
SMCHD1-204ENST00000581226 GORABQ5T7V8 394 aa4.99□□□□□ -1.61
SMCHD1-204ENST00000581226 GALNT7Q86SF2 657 aa4.99□□□□□ -1.61
SMCHD1-204ENST00000581226 CCDC25Q86WR0 208 aa4.99□□□□□ -1.61
SMCHD1-204ENST00000581226 ZNF354CQ86Y25 554 aa4.99□□□□□ -1.61
SMCHD1-204ENST00000581226 ANKRD44Q8N8A2 993 aa4.99□□□□□ -1.61
SMCHD1-204ENST00000581226 ZNF548Q8NEK5 533 aaPredicted RBP4.99□□□□□ -1.61
SMCHD1-204ENST00000581226 MYRIPQ8NFW9 859 aa4.99□□□□□ -1.61
SMCHD1-204ENST00000581226 MPLKIPQ8TAP9 179 aa4.99□□□□□ -1.61
SMCHD1-204ENST00000581226 C2CD4CQ8TF44 421 aa4.99□□□□□ -1.61
SMCHD1-204ENST00000581226 ZNF419Q96HQ0 510 aaPredicted RBP4.99□□□□□ -1.61
SMCHD1-204ENST00000581226 PPP1R10Q96QC0 940 aaKnown RBP4.99□□□□□ -1.61
SMCHD1-204ENST00000581226 FOXP1Q9H334 677 aaPredicted RBP4.99□□□□□ -1.61
SMCHD1-204ENST00000581226 Q9N2J8 555 aa4.99□□□□□ -1.61
SMCHD1-204ENST00000581226 DECR2Q9NUI1 292 aa4.99□□□□□ -1.61
SMCHD1-204ENST00000581226 LUZP4Q9P127 313 aa4.99□□□□□ -1.61
SMCHD1-204ENST00000581226 DNAJC16Q9Y2G8 782 aa4.99□□□□□ -1.61
SMCHD1-204ENST00000581226 LY6G6EA0A0G2JKS1 128 aa4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 SAC3D1A6NKF1 404 aa4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 INO80B-WBP1J3KQ70 363 aa4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 ZC3H11AO75152 810 aaKnown RBP eCLIP4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 LCKP06239 509 aa4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 TNNT1P13805 278 aa4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 CPA1P15085 419 aa4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 ARSAP15289 507 aa4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 NR4A2P43354 598 aa4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 CYP2J2P51589 502 aa4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 SRSF1Q07955 248 aaKnown RBP eCLIP4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 GOLGA8FQ08AF8 430 aa4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 SLC12A1Q13621 1099 aa4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 ANKRD1Q15327 319 aa4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 INPP5JQ15735 1006 aaPredicted RBP4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 PLK5Q496M5 336 aa4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 ALG10Q5BKT4 473 aa4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 ALG10BQ5I7T1 473 aa4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 CBWD5Q5RIA9 395 aa4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 MANEAQ5SRI9 462 aa4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 VWA5B1Q5TIE3 1220 aa4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 FAM171A1Q5VUB5 890 aa4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 HMBOX1Q6NT76 420 aa4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 IGFN1Q86VF2 1251 aa4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 BRSK2Q8IWQ3 736 aa4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 CENPIQ92674 756 aaPredicted RBP4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 GCC1Q96CN9 775 aa4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 HMCESQ96FZ2 354 aa4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 WDR83Q9BRX9 315 aaKnown RBP4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 CADM1Q9BY67 442 aaKnown RBP4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 MYH16Q9H6N6 1097 aa4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 WDR26Q9H7D7 661 aa4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 SPAG4Q9NPE6 437 aa4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 RASSF1Q9NS23 344 aa4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 POT1Q9NUX5 634 aa4.98□□□□□ -1.61
SMCHD1-204ENST00000581226 A0A0G2JK05 382 aa4.97□□□□□ -1.61
SMCHD1-204ENST00000581226 TMEM247A6NEH6 219 aa4.97□□□□□ -1.61
SMCHD1-204ENST00000581226 A6NNC1 897 aa4.97□□□□□ -1.61
SMCHD1-204ENST00000581226 EIF3FO00303 357 aaPredicted RBP4.97□□□□□ -1.61
SMCHD1-204ENST00000581226 CHRNB1P11230 501 aa4.97□□□□□ -1.61
SMCHD1-204ENST00000581226 FCGR2AP12318 317 aa4.97□□□□□ -1.61
SMCHD1-204ENST00000581226 MVDP53602 400 aa4.97□□□□□ -1.61
SMCHD1-204ENST00000581226 ARHGAP8P85298 464 aa4.97□□□□□ -1.61
SMCHD1-204ENST00000581226 EFR3AQ14156 821 aa4.97□□□□□ -1.61
SMCHD1-204ENST00000581226 TAF12Q16514 161 aa4.97□□□□□ -1.61
SMCHD1-204ENST00000581226 ENTPD8Q5MY95 495 aa4.97□□□□□ -1.61
SMCHD1-204ENST00000581226 MMP21Q8N119 569 aa4.97□□□□□ -1.61
SMCHD1-204ENST00000581226 CPXCR1Q8N123 301 aa4.97□□□□□ -1.61
SMCHD1-204ENST00000581226 MSI2Q96DH6 328 aaKnown RBP4.97□□□□□ -1.61
SMCHD1-204ENST00000581226 ZNF48Q96MX3 618 aaPredicted RBP4.97□□□□□ -1.61
SMCHD1-204ENST00000581226 FCRL4Q96PJ5 515 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms