RNA–Protein interactions for RNA: ENST00000581068.5

SKA2-206, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-206ENST00000581068 NRLP54845 237 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 WASHC5Q12768 1159 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 USP4Q13107 963 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 CBX2Q14781 532 aaPredicted RBP11.3□□□□□ -0.6
SKA2-206ENST00000581068 MORF4L2Q15014 288 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 ZNF77Q15935 545 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 ANO4Q32M45 955 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 FAM153CQ494X1 144 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 ATAT1Q5SQI0 421 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 RNASEH2BQ5TBB1 312 aaKnown RBP11.3□□□□□ -0.6
SKA2-206ENST00000581068 SYCE2Q6PIF2 218 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 RHBDF2Q6PJF5 856 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 CEP128Q6ZU80 1094 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 PID1Q7Z2X4 250 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 SETD3Q86TU7 594 aaPredicted RBP11.3□□□□□ -0.6
SKA2-206ENST00000581068 HOOK3Q86VS8 718 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 ARID3BQ8IVW6 561 aaPredicted RBP11.3□□□□□ -0.6
SKA2-206ENST00000581068 CELF5Q8N6W0 485 aaKnown RBP11.3□□□□□ -0.6
SKA2-206ENST00000581068 KIAA1958Q8N8K9 716 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 TDRD5Q8NAT2 981 aaKnown RBP11.3□□□□□ -0.6
SKA2-206ENST00000581068 CCDC110Q8TBZ0 833 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 FBXO25Q8TCJ0 367 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 DEPDC1BQ8WUY9 529 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 FATE1Q969F0 183 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 HMCESQ96FZ2 354 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 FMO2Q99518 471 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 APOL5Q9BWW9 433 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 RAB6BQ9NRW1 208 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 FAM153AQ9UHL3 310 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 IPO11Q9UI26 975 aaKnown RBP11.3□□□□□ -0.6
SKA2-206ENST00000581068 CCL26Q9Y258 94 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 TBC1D30Q9Y2I9 924 aa11.3□□□□□ -0.6
SKA2-206ENST00000581068 MYO7AQ13402 2215 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 CEP290O15078 2479 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 H0Y626 953 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 KCNK1O00180 336 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 SLC9A3R1O14745 358 aaPredicted RBP11.29□□□□□ -0.6
SKA2-206ENST00000581068 SCAMP3O14828 347 aaKnown RBP11.29□□□□□ -0.6
SKA2-206ENST00000581068 PRAMEF12O95522 483 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 JCHAINP01591 159 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 CYBBP04839 570 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 CCNB1P14635 433 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 PTPN3P26045 913 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 ETFBP38117 255 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 IFI35P80217 286 aaPredicted RBP11.29□□□□□ -0.6
SKA2-206ENST00000581068 BASP1P80723 227 aaKnown RBP11.29□□□□□ -0.6
SKA2-206ENST00000581068 GNA12Q03113 381 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 IL10RBQ08334 325 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 SERINC3Q13530 473 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 PARP6Q2NL67 630 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 TEX44Q53QW1 395 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 MPP7Q5T2T1 576 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 ITPRIPL1Q6GPH6 555 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 CES5AQ6NT32 575 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 ZNF783Q6ZMS7 281 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 ARHGAP36Q6ZRI8 547 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 ZNF354CQ86Y25 554 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 CCDC117Q8IWD4 279 aaPredicted RBP11.29□□□□□ -0.6
SKA2-206ENST00000581068 ZNF567Q8N184 647 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 CARNMT1Q8N4J0 409 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 TAB3Q8N5C8 712 aaPredicted RBP11.29□□□□□ -0.6
SKA2-206ENST00000581068 ZSCAN18Q8TBC5 510 aaPredicted RBP11.29□□□□□ -0.6
SKA2-206ENST00000581068 DDI1Q8WTU0 396 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 NSMCE1Q8WV22 266 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 CPT1BQ92523 772 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 ARHGEF2Q92974 986 aaKnown RBP11.29□□□□□ -0.6
SKA2-206ENST00000581068 OTUB2Q96DC9 234 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 IL12RB2Q99665 862 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 TTYH1Q9H313 450 aaPredicted RBP11.29□□□□□ -0.6
SKA2-206ENST00000581068 SP110Q9HB58 689 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 ETNK1Q9HBU6 452 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 GDE1Q9NZC3 331 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 KLHL8Q9P2G9 620 aaPredicted RBP11.29□□□□□ -0.6
SKA2-206ENST00000581068 SHOC2Q9UQ13 582 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 COLQQ9Y215 455 aaPredicted RBP11.29□□□□□ -0.6
SKA2-206ENST00000581068 MTCH2Q9Y6C9 303 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 NOTCH4Q99466 2003 aa11.29□□□□□ -0.6
SKA2-206ENST00000581068 CHADO15335 359 aa11.28□□□□□ -0.6
SKA2-206ENST00000581068 TP73O15350 636 aa11.28□□□□□ -0.6
SKA2-206ENST00000581068 PSMD3O43242 534 aa11.28□□□□□ -0.6
SKA2-206ENST00000581068 ATP8B1O43520 1251 aa11.28□□□□□ -0.6
SKA2-206ENST00000581068 KDELR3O43731 214 aa11.28□□□□□ -0.6
SKA2-206ENST00000581068 NEBLO76041 1014 aa11.28□□□□□ -0.6
SKA2-206ENST00000581068 LUC7L3O95232 432 aaKnown RBP11.28□□□□□ -0.6
SKA2-206ENST00000581068 METTL18O95568 372 aa11.28□□□□□ -0.6
SKA2-206ENST00000581068 ACVRL1P37023 503 aa11.28□□□□□ -0.6
SKA2-206ENST00000581068 MAGEA6P43360 314 aa11.28□□□□□ -0.6
SKA2-206ENST00000581068 OXCT1P55809 520 aa11.28□□□□□ -0.6
SKA2-206ENST00000581068 GRIN2CQ14957 1233 aa11.28□□□□□ -0.6
SKA2-206ENST00000581068 SLMAPQ14BN4 828 aa11.28□□□□□ -0.6
SKA2-206ENST00000581068 RNF219Q5W0B1 726 aaPredicted RBP11.28□□□□□ -0.6
SKA2-206ENST00000581068 PPP1R21Q6ZMI0 780 aa11.28□□□□□ -0.6
SKA2-206ENST00000581068 GET4Q7L5D6 327 aaPredicted RBP11.28□□□□□ -0.6
SKA2-206ENST00000581068 HDXQ7Z353 690 aa11.28□□□□□ -0.6
SKA2-206ENST00000581068 NPAS3Q8IXF0 933 aa11.28□□□□□ -0.6
SKA2-206ENST00000581068 ZCCHC9Q8N567 271 aaKnown RBP11.28□□□□□ -0.6
SKA2-206ENST00000581068 NAT8LQ8N9F0 302 aa11.28□□□□□ -0.6
SKA2-206ENST00000581068 USP33Q8TEY7 942 aa11.28□□□□□ -0.6
SKA2-206ENST00000581068 MAML1Q92585 1016 aa11.28□□□□□ -0.6
SKA2-206ENST00000581068 PRCCQ92733 491 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms