RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 ZNF783Q6ZMS7 281 aa15.25■□□□□ 0.03
SS18-212ENST00000579061 USP30Q70CQ3 517 aa15.25■□□□□ 0.03
SS18-212ENST00000579061 PHLDB2Q86SQ0 1253 aa15.25■□□□□ 0.03
SS18-212ENST00000579061 DEFB119Q8N690 84 aa15.25■□□□□ 0.03
SS18-212ENST00000579061 OR52K2Q8NGK3 314 aa15.25■□□□□ 0.03
SS18-212ENST00000579061 PTPRN2Q92932 1015 aa15.25■□□□□ 0.03
SS18-212ENST00000579061 NTAN1Q96AB6 310 aa15.25■□□□□ 0.03
SS18-212ENST00000579061 RPL10LQ96L21 214 aaKnown RBP15.25■□□□□ 0.03
SS18-212ENST00000579061 ZYG11BQ9C0D3 744 aa15.25■□□□□ 0.03
SS18-212ENST00000579061 TMPRSS4Q9NRS4 437 aa15.25■□□□□ 0.03
SS18-212ENST00000579061 VPS28Q9UK41 221 aa15.25■□□□□ 0.03
SS18-212ENST00000579061 SLC6A14Q9UN76 642 aa15.25■□□□□ 0.03
SS18-212ENST00000579061 SNX10Q9Y5X0 201 aa15.25■□□□□ 0.03
SS18-212ENST00000579061 DNAH14Q0VDD8 3507 aa15.25■□□□□ 0.03
SS18-212ENST00000579061 ADAMTS9Q9P2N4 1935 aa15.24■□□□□ 0.03
SS18-212ENST00000579061 A0A1W2PQJ5 194 aa15.24■□□□□ 0.03
SS18-212ENST00000579061 ILVBLA1L0T0 632 aa15.24■□□□□ 0.03
SS18-212ENST00000579061 METTL12A8MUP2 240 aa15.24■□□□□ 0.03
SS18-212ENST00000579061 TM4SF5O14894 197 aa15.24■□□□□ 0.03
SS18-212ENST00000579061 GJB6O95452 261 aa15.24■□□□□ 0.03
SS18-212ENST00000579061 RHOCP08134 193 aa15.24■□□□□ 0.03
SS18-212ENST00000579061 SERPINF2P08697 491 aa15.24■□□□□ 0.03
SS18-212ENST00000579061 STK19P49842 368 aaPredicted RBP15.24■□□□□ 0.03
SS18-212ENST00000579061 ZNF143P52747 638 aaPredicted RBP15.24■□□□□ 0.03
SS18-212ENST00000579061 HDAC4P56524 1084 aa15.24■□□□□ 0.03
SS18-212ENST00000579061 ELAVL3Q14576 367 aaKnown RBP15.24■□□□□ 0.03
SS18-212ENST00000579061 PPP1R15BQ5SWA1 713 aa15.24■□□□□ 0.03
SS18-212ENST00000579061 C6orf118Q5T5N4 469 aa15.24■□□□□ 0.03
SS18-212ENST00000579061 SH3PXD2AQ5TCZ1 1133 aa15.24■□□□□ 0.03
SS18-212ENST00000579061 MANEALQ5VSG8 457 aa15.24■□□□□ 0.03
SS18-212ENST00000579061 CACUL1Q86Y37 369 aa15.24■□□□□ 0.03
SS18-212ENST00000579061 RGL4Q8IZJ4 473 aa15.24■□□□□ 0.03
SS18-212ENST00000579061 DCAF4L2Q8NA75 395 aa15.24■□□□□ 0.03
SS18-212ENST00000579061 FAM172AQ8WUF8 416 aa15.24■□□□□ 0.03
SS18-212ENST00000579061 C2orf49Q9BVC5 232 aaPredicted RBP15.24■□□□□ 0.03
SS18-212ENST00000579061 BTBD1Q9H0C5 482 aa15.24■□□□□ 0.03
SS18-212ENST00000579061 MUC3BQ9H195 1237 aa15.24■□□□□ 0.03
SS18-212ENST00000579061 PABPC3Q9H361 631 aaKnown RBP15.24■□□□□ 0.03
SS18-212ENST00000579061 MTG2Q9H4K7 406 aa15.24■□□□□ 0.03
SS18-212ENST00000579061 HAUS4Q9H6D7 363 aa15.24■□□□□ 0.03
SS18-212ENST00000579061 SGK2Q9HBY8 427 aa15.24■□□□□ 0.03
SS18-212ENST00000579061 CAPN10Q9HC96 672 aa15.24■□□□□ 0.03
SS18-212ENST00000579061 TMEM9BQ9NQ34 198 aa15.24■□□□□ 0.03
SS18-212ENST00000579061 MPP6Q9NZW5 540 aa15.24■□□□□ 0.03
SS18-212ENST00000579061 ZNF212Q9UDV6 495 aa15.24■□□□□ 0.03
SS18-212ENST00000579061 OR12D3Q9UGF7 316 aa15.24■□□□□ 0.03
SS18-212ENST00000579061 HS3ST2Q9Y278 367 aa15.24■□□□□ 0.03
SS18-212ENST00000579061 NCKAP1Q9Y2A7 1128 aa15.24■□□□□ 0.03
SS18-212ENST00000579061 ASCC3Q8N3C0 2202 aaKnown RBP15.24■□□□□ 0.03
SS18-212ENST00000579061 PCDH15Q96QU1 1955 aa15.24■□□□□ 0.03
SS18-212ENST00000579061 ATXN2Q99700 1313 aaKnown RBP15.23■□□□□ 0.03
SS18-212ENST00000579061 MEI4A8MW99 385 aa15.23■□□□□ 0.03
SS18-212ENST00000579061 SRGAP2O75044 1071 aa15.23■□□□□ 0.03
SS18-212ENST00000579061 GNSP15586 552 aa15.23■□□□□ 0.03
SS18-212ENST00000579061 DESP17661 470 aa15.23■□□□□ 0.03
SS18-212ENST00000579061 OR1E1P30953 314 aa15.23■□□□□ 0.03
SS18-212ENST00000579061 AIF1P55008 147 aa15.23■□□□□ 0.03
SS18-212ENST00000579061 KLHL30Q0D2K2 578 aa15.23■□□□□ 0.03
SS18-212ENST00000579061 SCAPQ12770 1279 aa15.23■□□□□ 0.03
SS18-212ENST00000579061 CST6Q15828 149 aa15.23■□□□□ 0.03
SS18-212ENST00000579061 RAB6CQ53S08 254 aa15.23■□□□□ 0.03
SS18-212ENST00000579061 E4F1Q66K89 784 aaPredicted RBP15.23■□□□□ 0.03
SS18-212ENST00000579061 DCUN1D2Q6PH85 259 aa15.23■□□□□ 0.03
SS18-212ENST00000579061 LRSAM1Q6UWE0 723 aa15.23■□□□□ 0.03
SS18-212ENST00000579061 ZNF571Q7Z3V5 609 aaPredicted RBP15.23■□□□□ 0.03
SS18-212ENST00000579061 SH2D3CQ8N5H7 860 aa15.23■□□□□ 0.03
SS18-212ENST00000579061 FRS2Q8WU20 508 aa15.23■□□□□ 0.03
SS18-212ENST00000579061 SYN2Q92777 582 aaPredicted RBP15.23■□□□□ 0.03
SS18-212ENST00000579061 MCEEQ96PE7 176 aa15.23■□□□□ 0.03
SS18-212ENST00000579061 FAM129BQ96TA1 746 aa15.23■□□□□ 0.03
SS18-212ENST00000579061 PSMB7Q99436 277 aa15.23■□□□□ 0.03
SS18-212ENST00000579061 CNPY3Q9BT09 278 aa15.23■□□□□ 0.03
SS18-212ENST00000579061 RAB6CQ9H0N0 254 aa15.23■□□□□ 0.03
SS18-212ENST00000579061 TAS2R14Q9NYV8 317 aa15.23■□□□□ 0.03
SS18-212ENST00000579061 BZW2Q9Y6E2 419 aaKnown RBP15.23■□□□□ 0.03
SS18-212ENST00000579061 CXorf51AA0A1B0GTR3 108 aa15.22■□□□□ 0.03
SS18-212ENST00000579061 DCDC2BA2VCK2 349 aa15.22■□□□□ 0.03
SS18-212ENST00000579061 CDX4O14627 284 aaPredicted RBP15.22■□□□□ 0.03
SS18-212ENST00000579061 ALOX15BO15296 676 aa15.22■□□□□ 0.03
SS18-212ENST00000579061 CCP110O43303 1012 aa15.22■□□□□ 0.03
SS18-212ENST00000579061 SEMA4FO95754 770 aa15.22■□□□□ 0.03
SS18-212ENST00000579061 ADH1BP00325 375 aa15.22■□□□□ 0.03
SS18-212ENST00000579061 CFIP05156 583 aa15.22■□□□□ 0.03
SS18-212ENST00000579061 C5AR1P21730 350 aa15.22■□□□□ 0.03
SS18-212ENST00000579061 RRM1P23921 792 aa15.22■□□□□ 0.03
SS18-212ENST00000579061 ACSL1P33121 698 aa15.22■□□□□ 0.03
SS18-212ENST00000579061 RPL7AP62424 266 aaKnown RBP15.22■□□□□ 0.03
SS18-212ENST00000579061 GFPT1Q06210 699 aaPredicted RBP15.22■□□□□ 0.03
SS18-212ENST00000579061 DLG2Q15700 870 aa15.22■□□□□ 0.03
SS18-212ENST00000579061 DCAF12L1Q5VU92 463 aa15.22■□□□□ 0.03
SS18-212ENST00000579061 DAB2IPQ5VWQ8 1189 aa15.22■□□□□ 0.03
SS18-212ENST00000579061 PLEKHA7Q6IQ23 1121 aa15.22■□□□□ 0.03
SS18-212ENST00000579061 TFAP2DQ7Z6R9 452 aa15.22■□□□□ 0.03
SS18-212ENST00000579061 DSG4Q86SJ6 1040 aa15.22■□□□□ 0.03
SS18-212ENST00000579061 FAM124AQ86V42 546 aa15.22■□□□□ 0.03
SS18-212ENST00000579061 MMAAQ8IVH4 418 aaKnown RBP15.22■□□□□ 0.03
SS18-212ENST00000579061 STK40Q8N2I9 435 aa15.22■□□□□ 0.03
SS18-212ENST00000579061 PARVAQ9NVD7 372 aa15.22■□□□□ 0.03
SS18-212ENST00000579061 FBXL12Q9NXK8 326 aa15.22■□□□□ 0.03
SS18-212ENST00000579061 ADAMTS1Q9UHI8 967 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms