RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 DRG2P55039 364 aaKnown RBP14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 GBE1Q04446 702 aa14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 CALCOCO2Q13137 446 aa14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 ZNF177Q13360 481 aaPredicted RBP14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 CUL1Q13616 776 aa14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 EML3Q32P44 896 aa14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 MPPE1Q53F39 396 aa14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 MPP7Q5T2T1 576 aa14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 C6orf118Q5T5N4 469 aa14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 NPNTQ6UXI9 565 aa14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 PCGF5Q86SE9 256 aa14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 C14orf80Q86SX3 495 aa14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 UMODL1-AS1Q8N2C9 162 aa14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 CPA6Q8N4T0 437 aa14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 ALLCQ8N6M5 410 aa14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 EIF1ADQ8N9N8 165 aaKnown RBP14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 CCNYQ8ND76 341 aa14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 LRRN4CLQ8ND94 238 aa14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 NSMCE1Q8WV22 266 aa14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 HDAC11Q96DB2 347 aa14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 TMA16Q96EY4 203 aaKnown RBP14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 ERP44Q9BS26 406 aa14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 LINC00597Q9H2U6 94 aa14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 EBF3Q9H4W6 596 aa14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 SAE1Q9UBE0 346 aaPredicted RBP14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.28□□□□□ -0.123e-8■■□□□ 12.9
CSNK1D-209ENST00000578904 ASIC3Q9UHC3 531 aa14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 DUSP12Q9UNI6 340 aa14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 SORCS3Q9UPU3 1222 aa14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 V9GYY5 206 aaPredicted RBP14.28□□□□□ -0.12
CSNK1D-209ENST00000578904 CHD5Q8TDI0 1954 aa14.27□□□□□ -0.12
CSNK1D-209ENST00000578904 MFSD11O43934 449 aa14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 NEBLO76041 1014 aa14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 GGCXP38435 758 aa14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 GUCY2DQ02846 1103 aa14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 CAV1Q03135 178 aa14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 TNK2Q07912 1038 aa14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 GALNT2Q10471 571 aa14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 AP1B1Q10567 949 aa14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 PTK6Q13882 451 aa14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 ELF2Q15723 593 aa14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 ANO4Q32M45 955 aa14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 PARP15Q460N3 678 aa14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 FAM133BQ5BKY9 247 aaKnown RBP14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 NADSYN1Q6IA69 706 aa14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 WDR93Q6P2C0 686 aa14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 TTC27Q6P3X3 843 aa14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 ZNF783Q6ZMS7 281 aa14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 SETD3Q86TU7 594 aaPredicted RBP14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 FAM217AQ8IXS0 508 aa14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 ZNF683Q8IZ20 524 aa14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 ATPAF2Q8N5M1 289 aa14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 CSGALNACT1Q8TDX6 532 aa14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 IRF7Q92985 503 aa14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 OLFM3Q96PB7 478 aa14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 QKIQ96PU8 341 aaKnown RBP eCLIP14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 VAT1Q99536 393 aa14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 FAM83CQ9BQN1 747 aa14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 TMEM121Q9BTD3 319 aa14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 MAGEH1Q9H213 219 aa14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 PCDH9Q9HC56 1237 aa14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 HPS4Q9NQG7 708 aa14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 ETNK2Q9NVF9 386 aa14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 MPP6Q9NZW5 540 aa14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 HPCAL4Q9UM19 191 aa14.27□□□□□ -0.13
CSNK1D-209ENST00000578904 GOLGA6L7A0A1B0GV03 622 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 SMAPO00193 183 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 DFFAO00273 331 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 ARNTLO00327 626 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 DYNC1I1O14576 645 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 KCNN4O15554 427 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 RAMP2O60895 175 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 ADH1CP00326 375 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 IFNB1P01574 187 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 CYP17A1P05093 508 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 ITIH2P19823 946 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 CCNCP24863 283 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 ADCY8P40145 1251 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 GARSP41250 739 aaKnown RBP14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 PTGIRP43119 386 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 SLC7A5Q01650 507 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 PFKPQ01813 784 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 RUNX3Q13761 415 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 POLD3Q15054 466 aaPredicted RBP14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 BRD3Q15059 726 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 P3H1Q32P28 736 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 LY6G5CQ5SRR4 150 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 RFWD3Q6PCD5 774 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 TPGS1Q6ZTW0 290 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 CEP128Q6ZU80 1094 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 NLRP14Q86W24 1093 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 ZNF354CQ86Y25 554 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 TTC8Q8TAM2 541 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 DDI1Q8WTU0 396 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 HTR3CQ8WXA8 447 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 DNASE1L2Q92874 299 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 IGSF8Q969P0 613 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 TSGA13Q96PP4 275 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 PPP1R2P1Q96PQ5 205 aa14.26□□□□□ -0.13
CSNK1D-209ENST00000578904 FAM118BQ9BPY3 351 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms