RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 PJA1Q8NG27 643 aa13.02□□□□□ -0.33
MKS1-206ENST00000577824 ARHGEF2Q92974 986 aaKnown RBP13.02□□□□□ -0.33
MKS1-206ENST00000577824 RNF25Q96BH1 459 aaPredicted RBP13.02□□□□□ -0.33
MKS1-206ENST00000577824 NELL2Q99435 816 aa13.02□□□□□ -0.33
MKS1-206ENST00000577824 PSMB7Q99436 277 aa13.02□□□□□ -0.33
MKS1-206ENST00000577824 COL25A1Q9BXS0 654 aaPredicted RBP13.02□□□□□ -0.33
MKS1-206ENST00000577824 TBC1D17Q9HA65 648 aa13.02□□□□□ -0.33
MKS1-206ENST00000577824 DNAI1Q9UI46 699 aa13.02□□□□□ -0.33
MKS1-206ENST00000577824 RAD54BQ9Y620 910 aa13.02□□□□□ -0.33
MKS1-206ENST00000577824 TECTAO75443 2155 aa13.02□□□□□ -0.33
MKS1-206ENST00000577824 F5P12259 2224 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 A0A0D9SEW6 157 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 TNFRSF10AO00220 468 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 NPC1O15118 1278 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 FANCGO15287 622 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 TIMM44O43615 452 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 EGFP01133 1207 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 CHRNB1P11230 501 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 TNNT1P13805 278 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 HNRNPLP14866 589 aaKnown RBP eCLIP13.01□□□□□ -0.33
MKS1-206ENST00000577824 AMPD1P23109 780 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 RPS9P46781 194 aaKnown RBP13.01□□□□□ -0.33
MKS1-206ENST00000577824 SULT2A1Q06520 285 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 KLF1Q13351 362 aaPredicted RBP13.01□□□□□ -0.33
MKS1-206ENST00000577824 SERINC3Q13530 473 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 TFDP2Q14188 446 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 LRRC32Q14392 662 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 E2F5Q15329 346 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 HSF5Q4G112 596 aaPredicted RBP13.01□□□□□ -0.33
MKS1-206ENST00000577824 ODF2Q5BJF6 829 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 DGKKQ5KSL6 1271 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 ZFYVE27Q5T4F4 411 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 MBLAC2Q68D91 279 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 BBS12Q6ZW61 710 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 BMP8AQ7Z5Y6 402 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 SFTPA1Q8IWL2 248 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 CCDC105Q8IYK2 499 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 APCDD1Q8J025 514 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 C17orf53Q8N3J3 647 aaPredicted RBP13.01□□□□□ -0.33
MKS1-206ENST00000577824 CCDC26Q8TAB7 109 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 ACDQ96AP0 544 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 CLDN23Q96B33 292 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 OLFM3Q96PB7 478 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 IER2Q9BTL4 223 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 C2orf49Q9BVC5 232 aaPredicted RBP13.01□□□□□ -0.33
MKS1-206ENST00000577824 OSBPL8Q9BZF1 889 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 ELOVL2Q9NXB9 296 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 HCN2Q9UL51 889 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 MFHAS1Q9Y4C4 1052 aa13.01□□□□□ -0.33
MKS1-206ENST00000577824 NYNRINQ9P2P1 1898 aaKnown RBP13.01□□□□□ -0.33
MKS1-206ENST00000577824 TBC1D3BA6NDS4 549 aa13□□□□□ -0.33
MKS1-206ENST00000577824 TMEM221A6NGB7 291 aa13□□□□□ -0.33
MKS1-206ENST00000577824 RASA4BC9J798 803 aa13□□□□□ -0.33
MKS1-206ENST00000577824 M0R296 226 aa13□□□□□ -0.33
MKS1-206ENST00000577824 CES2O00748 559 aa13□□□□□ -0.33
MKS1-206ENST00000577824 APOL1O14791 398 aa13□□□□□ -0.33
MKS1-206ENST00000577824 RASA4O43374 803 aa13□□□□□ -0.33
MKS1-206ENST00000577824 ZMPSTE24O75844 475 aa13□□□□□ -0.33
MKS1-206ENST00000577824 DLDP09622 509 aaKnown RBP13□□□□□ -0.33
MKS1-206ENST00000577824 CD72P21854 359 aa13□□□□□ -0.33
MKS1-206ENST00000577824 TGM2P21980 687 aa13□□□□□ -0.33
MKS1-206ENST00000577824 MAGEA9P43362 315 aa13□□□□□ -0.33
MKS1-206ENST00000577824 ADCY2Q08462 1091 aa13□□□□□ -0.33
MKS1-206ENST00000577824 GALNT2Q10471 571 aa13□□□□□ -0.33
MKS1-206ENST00000577824 POLD3Q15054 466 aaPredicted RBP13□□□□□ -0.33
MKS1-206ENST00000577824 PTPRNQ16849 979 aa13□□□□□ -0.33
MKS1-206ENST00000577824 RNF219Q5W0B1 726 aaPredicted RBP13□□□□□ -0.33
MKS1-206ENST00000577824 LRRC49Q8IUZ0 686 aa13□□□□□ -0.33
MKS1-206ENST00000577824 CCDC50Q8IVM0 306 aa13□□□□□ -0.33
MKS1-206ENST00000577824 FATE1Q969F0 183 aa13□□□□□ -0.33
MKS1-206ENST00000577824 HMCESQ96FZ2 354 aa13□□□□□ -0.33
MKS1-206ENST00000577824 MYO19Q96H55 970 aa13□□□□□ -0.33
MKS1-206ENST00000577824 MRGPRX3Q96LB0 322 aa13□□□□□ -0.33
MKS1-206ENST00000577824 WDR24Q96S15 920 aa13□□□□□ -0.33
MKS1-206ENST00000577824 HERPUD2Q9BSE4 406 aa13□□□□□ -0.33
MKS1-206ENST00000577824 MUC3BQ9H195 1237 aa13□□□□□ -0.33
MKS1-206ENST00000577824 PDFQ9HBH1 243 aa13□□□□□ -0.33
MKS1-206ENST00000577824 DTLQ9NZJ0 730 aa13□□□□□ -0.33
MKS1-206ENST00000577824 DLGAP2Q9P1A6 1054 aa13□□□□□ -0.33
MKS1-206ENST00000577824 VPS51Q9UID3 782 aa13□□□□□ -0.33
MKS1-206ENST00000577824 VPS28Q9UK41 221 aa13□□□□□ -0.33
MKS1-206ENST00000577824 HS3ST2Q9Y278 367 aa13□□□□□ -0.33
MKS1-206ENST00000577824 ZSCAN5CA6NGD5 496 aaPredicted RBP12.99□□□□□ -0.33
MKS1-206ENST00000577824 ARHGAP42A6NI28 874 aa12.99□□□□□ -0.33
MKS1-206ENST00000577824 CHURC1-FNTBB4DL54 471 aa12.99□□□□□ -0.33
MKS1-206ENST00000577824 APOC4-APOC2K7ER74 178 aa12.99□□□□□ -0.33
MKS1-206ENST00000577824 KCNK3O14649 394 aa12.99□□□□□ -0.33
MKS1-206ENST00000577824 ENC1O14682 589 aa12.99□□□□□ -0.33
MKS1-206ENST00000577824 KDELR3O43731 214 aa12.99□□□□□ -0.33
MKS1-206ENST00000577824 APOC2P02655 101 aa12.99□□□□□ -0.33
MKS1-206ENST00000577824 ATP1A1P05023 1023 aaKnown RBP12.99□□□□□ -0.33
MKS1-206ENST00000577824 ATP5BP06576 529 aaKnown RBP12.99□□□□□ -0.33
MKS1-206ENST00000577824 SRPRAP08240 638 aaKnown RBP12.99□□□□□ -0.33
MKS1-206ENST00000577824 KRT10P13645 584 aa12.99□□□□□ -0.33
MKS1-206ENST00000577824 POLR2EP19388 210 aaKnown RBP12.99□□□□□ -0.33
MKS1-206ENST00000577824 AOC1P19801 751 aa12.99□□□□□ -0.33
MKS1-206ENST00000577824 ACVRL1P37023 503 aa12.99□□□□□ -0.33
MKS1-206ENST00000577824 CETN2P41208 172 aa12.99□□□□□ -0.33
MKS1-206ENST00000577824 NR2C2P49116 596 aa12.99□□□□□ -0.33
MKS1-206ENST00000577824 GNG11P61952 73 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms