RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 STK32AQ8WU08 396 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 FRS2Q8WU20 508 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 OR8D1Q8WZ84 308 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 MED15Q96RN5 788 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 UBL7Q96S82 380 aaPredicted RBP12.17□□□□□ -0.46
CDH8-202ENST00000577228 NRSN2Q9GZP1 204 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 INTS2Q9H0H0 1204 aaKnown RBP12.17□□□□□ -0.46
CDH8-202ENST00000577228 KDM4CQ9H3R0 1056 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 THAP9Q9H5L6 903 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 FAM204AQ9H8W3 233 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 CNTN6Q9UQ52 1028 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 DMTF1Q9Y222 760 aa12.17□□□□□ -0.46
CDH8-202ENST00000577228 C1QTNF3-AMACRE9PGA6 284 aa12.16□□□□□ -0.46
CDH8-202ENST00000577228 RRP8O43159 456 aaKnown RBP12.16□□□□□ -0.46
CDH8-202ENST00000577228 PLRG1O43660 514 aaKnown RBP12.16□□□□□ -0.46
CDH8-202ENST00000577228 TLX3O43711 291 aaPredicted RBP12.16□□□□□ -0.46
CDH8-202ENST00000577228 MAGEC1O60732 1142 aa12.16□□□□□ -0.46
CDH8-202ENST00000577228 LETM1O95202 739 aaPredicted RBP12.16□□□□□ -0.46
CDH8-202ENST00000577228 SLC2A3P11169 496 aa12.16□□□□□ -0.46
CDH8-202ENST00000577228 CKMT2P17540 419 aa12.16□□□□□ -0.46
CDH8-202ENST00000577228 EIF2S3P41091 472 aaKnown RBP12.16□□□□□ -0.46
CDH8-202ENST00000577228 PLK1P53350 603 aa12.16□□□□□ -0.46
CDH8-202ENST00000577228 PITX1P78337 314 aaPredicted RBP12.16□□□□□ -0.46
CDH8-202ENST00000577228 CDK17Q00537 523 aa12.16□□□□□ -0.46
CDH8-202ENST00000577228 KCNH2Q12809 1159 aa12.16□□□□□ -0.46
CDH8-202ENST00000577228 OVGP1Q12889 678 aa12.16□□□□□ -0.46
CDH8-202ENST00000577228 ILKQ13418 452 aa12.16□□□□□ -0.46
CDH8-202ENST00000577228 RTP5Q14D33 572 aa12.16□□□□□ -0.46
CDH8-202ENST00000577228 ACCSLQ4AC99 568 aa12.16□□□□□ -0.46
CDH8-202ENST00000577228 CXorf57Q6NSI4 855 aaKnown RBP12.16□□□□□ -0.46
CDH8-202ENST00000577228 TTI2Q6NXR4 508 aa12.16□□□□□ -0.46
CDH8-202ENST00000577228 KANSL1Q7Z3B3 1105 aa12.16□□□□□ -0.46
CDH8-202ENST00000577228 TMEM110Q86TL2 294 aa12.16□□□□□ -0.46
CDH8-202ENST00000577228 TRIM69Q86WT6 500 aa12.16□□□□□ -0.46
CDH8-202ENST00000577228 NELFBQ8WX92 580 aa12.16□□□□□ -0.46
CDH8-202ENST00000577228 RNF34Q969K3 372 aa12.16□□□□□ -0.46
CDH8-202ENST00000577228 FAM131CQ96AQ9 280 aa12.16□□□□□ -0.46
CDH8-202ENST00000577228 PPP1R9BQ96SB3 815 aa12.16□□□□□ -0.46
CDH8-202ENST00000577228 PRMT1Q99873 361 aaKnown RBP12.16□□□□□ -0.46
CDH8-202ENST00000577228 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.16□□□□□ -0.46
CDH8-202ENST00000577228 SLC25A13Q9UJS0 675 aa12.16□□□□□ -0.46
CDH8-202ENST00000577228 MAN1B1Q9UKM7 699 aa12.16□□□□□ -0.46
CDH8-202ENST00000577228 CELSR3Q9NYQ7 3312 aa12.16□□□□□ -0.46
CDH8-202ENST00000577228 SYNJ2BP-COX16A0A087WUM0 186 aa12.15□□□□□ -0.46
CDH8-202ENST00000577228 BICDL2A1A5D9 508 aa12.15□□□□□ -0.46
CDH8-202ENST00000577228 ALOX15BO15296 676 aa12.15□□□□□ -0.46
CDH8-202ENST00000577228 THAP12O43422 761 aa12.15□□□□□ -0.46
CDH8-202ENST00000577228 ATP9BO43861 1147 aa12.15□□□□□ -0.46
CDH8-202ENST00000577228 SDC3O75056 442 aa12.15□□□□□ -0.46
CDH8-202ENST00000577228 AFPP02771 609 aaKnown RBP12.15□□□□□ -0.46
CDH8-202ENST00000577228 GNA15P30679 374 aa12.15□□□□□ -0.46
CDH8-202ENST00000577228 CCR1P32246 355 aa12.15□□□□□ -0.46
CDH8-202ENST00000577228 VASPP50552 380 aaPredicted RBP12.15□□□□□ -0.46
CDH8-202ENST00000577228 CENPCQ03188 943 aa12.15□□□□□ -0.46
CDH8-202ENST00000577228 CNTN1Q12860 1018 aa12.15□□□□□ -0.46
CDH8-202ENST00000577228 PDCLQ13371 301 aa12.15□□□□□ -0.46
CDH8-202ENST00000577228 STAT4Q14765 748 aa12.15□□□□□ -0.46
CDH8-202ENST00000577228 TAF5Q15542 800 aa12.15□□□□□ -0.46
CDH8-202ENST00000577228 POM121L1PQ3SYA9 428 aa12.15□□□□□ -0.46
CDH8-202ENST00000577228 SETMARQ53H47 684 aaPredicted RBP12.15□□□□□ -0.46
CDH8-202ENST00000577228 AGBL4Q5VU57 503 aa12.15□□□□□ -0.46
CDH8-202ENST00000577228 FBXL22Q6P050 247 aa12.15□□□□□ -0.46
CDH8-202ENST00000577228 TRIM59Q8IWR1 403 aa12.15□□□□□ -0.46
CDH8-202ENST00000577228 ZNF606Q8WXB4 792 aa12.15□□□□□ -0.46
CDH8-202ENST00000577228 BAP1Q92560 729 aa12.15□□□□□ -0.46
CDH8-202ENST00000577228 TIGD1Q96MW7 591 aa12.15□□□□□ -0.46
CDH8-202ENST00000577228 RPRD1AQ96P16 312 aaPredicted RBP12.15□□□□□ -0.46
CDH8-202ENST00000577228 UBE2TQ9NPD8 197 aaPredicted RBP12.15□□□□□ -0.46
CDH8-202ENST00000577228 DDIT4Q9NX09 232 aa12.15□□□□□ -0.46
CDH8-202ENST00000577228 COX16Q9P0S2 106 aa12.15□□□□□ -0.46
CDH8-202ENST00000577228 ARHGAP20Q9P2F6 1191 aa12.15□□□□□ -0.46
CDH8-202ENST00000577228 SARDHQ9UL12 918 aa12.15□□□□□ -0.46
CDH8-202ENST00000577228 CTNND2Q9UQB3 1225 aa12.15□□□□□ -0.46
CDH8-202ENST00000577228 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.15□□□□□ -0.46
CDH8-202ENST00000577228 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.14□□□□□ -0.47
CDH8-202ENST00000577228 PRAMEF26H0Y7S4 382 aa12.14□□□□□ -0.47
CDH8-202ENST00000577228 GNA14O95837 355 aa12.14□□□□□ -0.47
CDH8-202ENST00000577228 ZNF18P17022 549 aa12.14□□□□□ -0.47
CDH8-202ENST00000577228 GLDCP23378 1020 aa12.14□□□□□ -0.47
CDH8-202ENST00000577228 ACP1P24666 158 aa12.14□□□□□ -0.47
CDH8-202ENST00000577228 ZNF177Q13360 481 aaPredicted RBP12.14□□□□□ -0.47
CDH8-202ENST00000577228 EIF4EBP2Q13542 120 aaPredicted RBP12.14□□□□□ -0.47
CDH8-202ENST00000577228 DLG2Q15700 870 aa12.14□□□□□ -0.47
CDH8-202ENST00000577228 PROX2Q3B8N5 592 aa12.14□□□□□ -0.47
CDH8-202ENST00000577228 FOXR2Q6PJQ5 311 aa12.14□□□□□ -0.47
CDH8-202ENST00000577228 Q6ZVU0 165 aa12.14□□□□□ -0.47
CDH8-202ENST00000577228 DEFB106AQ8N104 65 aa12.14□□□□□ -0.47
CDH8-202ENST00000577228 SNIP1Q8TAD8 396 aaKnown RBP12.14□□□□□ -0.47
CDH8-202ENST00000577228 RFFLQ8WZ73 363 aa12.14□□□□□ -0.47
CDH8-202ENST00000577228 ALG14Q96F25 216 aa12.14□□□□□ -0.47
CDH8-202ENST00000577228 KLHDC7BQ96G42 594 aa12.14□□□□□ -0.47
CDH8-202ENST00000577228 SLC2A13Q96QE2 648 aa12.14□□□□□ -0.47
CDH8-202ENST00000577228 FEM1AQ9BSK4 669 aa12.14□□□□□ -0.47
CDH8-202ENST00000577228 PRORYQ9H606 182 aa12.14□□□□□ -0.47
CDH8-202ENST00000577228 PREBQ9HCU5 417 aa12.14□□□□□ -0.47
CDH8-202ENST00000577228 VPS28Q9UK41 221 aa12.14□□□□□ -0.47
CDH8-202ENST00000577228 PPM1HQ9ULR3 514 aa12.14□□□□□ -0.47
CDH8-202ENST00000577228 CLCA2Q9UQC9 943 aa12.14□□□□□ -0.47
CDH8-202ENST00000577228 CA5BQ9Y2D0 317 aa12.14□□□□□ -0.47
CDH8-202ENST00000577228 LOC400499M0QZD8 3231 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms