RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 RAI2Q9Y5P3 530 aa12.4□□□□□ -0.42
PRPF8-215ENST00000576958 ACTL7AQ9Y615 435 aa12.4□□□□□ -0.42
PRPF8-215ENST00000576958 HS3ST4Q9Y661 456 aa12.4□□□□□ -0.42
PRPF8-215ENST00000576958 TARSL2A2RTX5 802 aaKnown RBP12.39□□□□□ -0.43
PRPF8-215ENST00000576958 GOLGA6L4A6NEF3 574 aa12.39□□□□□ -0.43
PRPF8-215ENST00000576958 F5H5T6 163 aa12.39□□□□□ -0.43
PRPF8-215ENST00000576958 CASC3O15234 703 aaKnown RBP12.39□□□□□ -0.43
PRPF8-215ENST00000576958 KALRNO60229 2985 aa12.39□□□□□ -0.43
PRPF8-215ENST00000576958 APOEP02649 317 aa12.39□□□□□ -0.43
PRPF8-215ENST00000576958 ITGAVP06756 1048 aa12.39□□□□□ -0.43
PRPF8-215ENST00000576958 SRPRAP08240 638 aaKnown RBP12.39□□□□□ -0.43
PRPF8-215ENST00000576958 PRLRP16471 622 aa12.39□□□□□ -0.43
PRPF8-215ENST00000576958 GLDCP23378 1020 aa12.39□□□□□ -0.43
PRPF8-215ENST00000576958 YWHAZP63104 245 aaKnown RBP12.39□□□□□ -0.43
PRPF8-215ENST00000576958 TARDBPQ13148 414 aaKnown RBP eCLIP12.39□□□□□ -0.43
PRPF8-215ENST00000576958 NME3Q13232 169 aa12.39□□□□□ -0.43
PRPF8-215ENST00000576958 AUHQ13825 339 aaKnown RBP12.39□□□□□ -0.43
PRPF8-215ENST00000576958 ARID5BQ14865 1188 aa12.39□□□□□ -0.43
PRPF8-215ENST00000576958 SUZ12Q15022 739 aaKnown RBP12.39□□□□□ -0.43
PRPF8-215ENST00000576958 ALFQ53S48 1182 aa12.39□□□□□ -0.43
PRPF8-215ENST00000576958 C2CD6Q53TS8 623 aa12.39□□□□□ -0.43
PRPF8-215ENST00000576958 AGBL4Q5VU57 503 aa12.39□□□□□ -0.43
PRPF8-215ENST00000576958 TRIM65Q6PJ69 517 aa12.39□□□□□ -0.43
PRPF8-215ENST00000576958 LINGO4Q6UY18 593 aa12.39□□□□□ -0.43
PRPF8-215ENST00000576958 SND1Q7KZF4 910 aaKnown RBP eCLIP12.39□□□□□ -0.43
PRPF8-215ENST00000576958 IRF2BP1Q8IU81 584 aa12.39□□□□□ -0.43
PRPF8-215ENST00000576958 CREBRFQ8IUR6 639 aa12.39□□□□□ -0.43
PRPF8-215ENST00000576958 ARRDC3Q96B67 414 aa12.39□□□□□ -0.43
PRPF8-215ENST00000576958 TIGD1Q96MW7 591 aa12.39□□□□□ -0.43
PRPF8-215ENST00000576958 NOX5Q96PH1 765 aa12.39□□□□□ -0.43
PRPF8-215ENST00000576958 SLC2A13Q96QE2 648 aa12.39□□□□□ -0.43
PRPF8-215ENST00000576958 PSMB7Q99436 277 aa12.39□□□□□ -0.43
PRPF8-215ENST00000576958 SIX2Q9NPC8 291 aa12.39□□□□□ -0.43
PRPF8-215ENST00000576958 UCKL1Q9NWZ5 548 aa12.39□□□□□ -0.43
PRPF8-215ENST00000576958 DDIT4Q9NX09 232 aa12.39□□□□□ -0.43
PRPF8-215ENST00000576958 FZD4Q9ULV1 537 aa12.39□□□□□ -0.43
PRPF8-215ENST00000576958 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.39□□□□□ -0.43
PRPF8-215ENST00000576958 OR51B4Q9Y5P0 310 aa12.39□□□□□ -0.43
PRPF8-215ENST00000576958 MGAQ8IWI9 3026 aa12.38□□□□□ -0.43
PRPF8-215ENST00000576958 TDRD6O60522 2096 aaKnown RBP12.38□□□□□ -0.43
PRPF8-215ENST00000576958 LRRC72A6NJI9 287 aa12.38□□□□□ -0.43
PRPF8-215ENST00000576958 TLR4O00206 839 aa12.38□□□□□ -0.43
PRPF8-215ENST00000576958 TRIM38O00635 465 aa12.38□□□□□ -0.43
PRPF8-215ENST00000576958 SMAD6O43541 496 aaKnown RBP12.38□□□□□ -0.43
PRPF8-215ENST00000576958 LATO43561 262 aa12.38□□□□□ -0.43
PRPF8-215ENST00000576958 RNASEH1O60930 286 aaKnown RBP12.38□□□□□ -0.43
PRPF8-215ENST00000576958 ADCY5O95622 1261 aa12.38□□□□□ -0.43
PRPF8-215ENST00000576958 LDOC1O95751 146 aaPredicted RBP12.38□□□□□ -0.43
PRPF8-215ENST00000576958 ABCB4P21439 1286 aa12.38□□□□□ -0.43
PRPF8-215ENST00000576958 C5AR1P21730 350 aa12.38□□□□□ -0.43
PRPF8-215ENST00000576958 EIF2S3P41091 472 aaKnown RBP12.38□□□□□ -0.43
PRPF8-215ENST00000576958 CCR5P51681 352 aa12.38□□□□□ -0.43
PRPF8-215ENST00000576958 SEMG2Q02383 582 aa12.38□□□□□ -0.43
PRPF8-215ENST00000576958 PAK1Q13153 545 aa12.38□□□□□ -0.43
PRPF8-215ENST00000576958 NNTQ13423 1086 aa12.38□□□□□ -0.43
PRPF8-215ENST00000576958 STILQ15468 1287 aa12.38□□□□□ -0.43
PRPF8-215ENST00000576958 ACCSLQ4AC99 568 aa12.38□□□□□ -0.43
PRPF8-215ENST00000576958 PTPN20Q4JDL3 420 aa12.38□□□□□ -0.43
PRPF8-215ENST00000576958 HES3Q5TGS1 186 aa12.38□□□□□ -0.43
PRPF8-215ENST00000576958 SFMBT2Q5VUG0 894 aa12.38□□□□□ -0.43
PRPF8-215ENST00000576958 RNF219Q5W0B1 726 aaPredicted RBP12.38□□□□□ -0.43
PRPF8-215ENST00000576958 TRNP1Q6NT89 227 aa12.38□□□□□ -0.43
PRPF8-215ENST00000576958 OLFML1Q6UWY5 402 aa12.38□□□□□ -0.43
PRPF8-215ENST00000576958 CHST14Q8NCH0 376 aa12.38□□□□□ -0.43
PRPF8-215ENST00000576958 TSC1Q92574 1164 aa12.38□□□□□ -0.43
PRPF8-215ENST00000576958 FAM131CQ96AQ9 280 aa12.38□□□□□ -0.43
PRPF8-215ENST00000576958 BTN2A3PQ96KV6 586 aa12.38□□□□□ -0.43
PRPF8-215ENST00000576958 RPRD1AQ96P16 312 aaPredicted RBP12.38□□□□□ -0.43
PRPF8-215ENST00000576958 DDX50Q9BQ39 737 aaKnown RBP12.38□□□□□ -0.43
PRPF8-215ENST00000576958 PIGVQ9NUD9 493 aa12.38□□□□□ -0.43
PRPF8-215ENST00000576958 KNTC1P50748 2209 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 A0A0D9SEW6 157 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 TYW5A2RUC4 315 aaKnown RBP12.37□□□□□ -0.43
PRPF8-215ENST00000576958 P4HA2O15460 535 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 PLRG1O43660 514 aaKnown RBP12.37□□□□□ -0.43
PRPF8-215ENST00000576958 PAGE1O75459 146 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 RFPL3O75679 317 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 ENDOD1O94919 500 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 RRM1P23921 792 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 MARSP56192 900 aaKnown RBP12.37□□□□□ -0.43
PRPF8-215ENST00000576958 CLDN2P57739 230 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 STIM1Q13586 685 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 ELAVL3Q14576 367 aaKnown RBP12.37□□□□□ -0.43
PRPF8-215ENST00000576958 E2F5Q15329 346 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 DLG2Q15700 870 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 CAMK4Q16566 473 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 HSP90AA4PQ58FG1 418 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 PIP5KL1Q5T9C9 394 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 OR6B2Q6IFH4 312 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 DPY19L2P1Q6NXN4 242 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 FBXL19Q6PCT2 694 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 SLC47A2Q86VL8 602 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 ZNF683Q8IZ20 524 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 GALNT15Q8N3T1 639 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 SLC25A45Q8N413 288 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 KDM1BQ8NB78 822 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 RNF34Q969K3 372 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 PPP1R13BQ96KQ4 1090 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 FEM1AQ9BSK4 669 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 MAGEB5Q9BZ81 275 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms