RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 COMMD8Q9NX08 183 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 DEC1Q9P2X7 70 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 SCML2Q9UQR0 700 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 FRMD4BQ9Y2L6 1034 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 RAD54BQ9Y620 910 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 SPTBN2O15020 2390 aa6.54□□□□□ -1.36
NUP88-212ENST00000576708 ABCA7Q8IZY2 2146 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 FAM237AA0A1B0GTK4 181 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 A0A1W2PQF6 199 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.53□□□□□ -1.36
NUP88-212ENST00000576708 TULP2O00295 520 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 IKBKBO14920 756 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 ALDH1A2O94788 518 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 RHOBTB3O94955 611 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 CBX7O95931 251 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 KLKB1P03952 638 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 CISD3P0C7P0 127 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 IMPDH2P12268 514 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 KRT13P13646 458 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 HOXB2P14652 356 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 TYRP14679 529 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 ITIH2P19823 946 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 ATP5C1P36542 298 aaKnown RBP6.53□□□□□ -1.36
NUP88-212ENST00000576708 TUBP50607 506 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 KIF11P52732 1056 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 KRT85P78386 507 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 INCA1Q0VD86 236 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 ADAM9Q13443 819 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 ZCWPW2Q504Y3 356 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 TRIM61Q5EBN2 209 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 C10orf120Q5SQS8 335 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 CDCP2Q5VXM1 449 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 GRAMD4Q6IC98 578 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 KRBA2Q6ZNG9 492 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 LPCAT2Q7L5N7 544 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 FAM169BQ8N8A8 192 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 OR2I1PQ8NGU4 316 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 DDX1Q92499 740 aaKnown RBP6.53□□□□□ -1.36
NUP88-212ENST00000576708 ERCC4Q92889 916 aaPredicted RBP6.53□□□□□ -1.36
NUP88-212ENST00000576708 OTUB2Q96DC9 234 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 DUSP16Q9BY84 665 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 FBXO44Q9H4M3 255 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 TMEM8AQ9HCN3 771 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 TMEM9BQ9NQ34 198 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.53□□□□□ -1.36
NUP88-212ENST00000576708 CALCOCO1Q9P1Z2 691 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 USP25Q9UHP3 1055 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 RALYQ9UKM9 306 aaKnown RBP6.53□□□□□ -1.36
NUP88-212ENST00000576708 ANGPTL2Q9UKU9 493 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 THADAQ6YHU6 1953 aa6.53□□□□□ -1.36
NUP88-212ENST00000576708 SPAG17Q6Q759 2223 aa6.52□□□□□ -1.37
NUP88-212ENST00000576708 RGS13O14921 159 aa6.52□□□□□ -1.37
NUP88-212ENST00000576708 MAPK13O15264 365 aa6.52□□□□□ -1.37
NUP88-212ENST00000576708 CACNG3O60359 315 aa6.52□□□□□ -1.37
NUP88-212ENST00000576708 STC2O76061 302 aa6.52□□□□□ -1.37
NUP88-212ENST00000576708 UBOX5O94941 541 aa6.52□□□□□ -1.37
NUP88-212ENST00000576708 ZNF202O95125 648 aa6.52□□□□□ -1.37
NUP88-212ENST00000576708 CALCAP01258 141 aa6.52□□□□□ -1.37
NUP88-212ENST00000576708 CFIP05156 583 aa6.52□□□□□ -1.37
NUP88-212ENST00000576708 MYL1P05976 194 aa6.52□□□□□ -1.37
NUP88-212ENST00000576708 ENGP17813 658 aa6.52□□□□□ -1.37
NUP88-212ENST00000576708 NTSR1P30989 418 aa6.52□□□□□ -1.37
NUP88-212ENST00000576708 SSTR4P31391 388 aa6.52□□□□□ -1.37
NUP88-212ENST00000576708 PSMC2P35998 433 aaKnown RBP6.52□□□□□ -1.37
NUP88-212ENST00000576708 RAD23BP54727 409 aa6.52□□□□□ -1.37
NUP88-212ENST00000576708 EFEMP1Q12805 493 aa6.52□□□□□ -1.37
NUP88-212ENST00000576708 PNOCQ13519 176 aa6.52□□□□□ -1.37
NUP88-212ENST00000576708 NFIL3Q16649 462 aa6.52□□□□□ -1.37
NUP88-212ENST00000576708 HSF5Q4G112 596 aaPredicted RBP6.52□□□□□ -1.37
NUP88-212ENST00000576708 CBWD6Q4V339 395 aa6.52□□□□□ -1.37
NUP88-212ENST00000576708 CBWD3Q5JTY5 395 aa6.52□□□□□ -1.37
NUP88-212ENST00000576708 CBWD5Q5RIA9 395 aa6.52□□□□□ -1.37
NUP88-212ENST00000576708 INTS8Q75QN2 995 aaKnown RBP6.52□□□□□ -1.37
NUP88-212ENST00000576708 C11orf74Q86VG3 221 aa6.52□□□□□ -1.37
NUP88-212ENST00000576708 CHPFQ8IZ52 775 aa6.52□□□□□ -1.37
NUP88-212ENST00000576708 GUF1Q8N442 669 aaKnown RBP6.52□□□□□ -1.37
NUP88-212ENST00000576708 SLC4A11Q8NBS3 891 aa6.52□□□□□ -1.37
NUP88-212ENST00000576708 DEFB124Q8NES8 71 aa6.52□□□□□ -1.37
NUP88-212ENST00000576708 IPO4Q8TEX9 1081 aaKnown RBP6.52□□□□□ -1.37
NUP88-212ENST00000576708 CCDC47Q96A33 483 aaKnown RBP6.52□□□□□ -1.37
NUP88-212ENST00000576708 CYP3A43Q9HB55 503 aa6.52□□□□□ -1.37
NUP88-212ENST00000576708 CD248Q9HCU0 757 aa6.52□□□□□ -1.37
NUP88-212ENST00000576708 CISHQ9NSE2 258 aa6.52□□□□□ -1.37
NUP88-212ENST00000576708 WDR35Q9P2L0 1181 aa6.52□□□□□ -1.37
NUP88-212ENST00000576708 ZC3H7BQ9UGR2 993 aaKnown RBP6.52□□□□□ -1.37
NUP88-212ENST00000576708 RASAL2Q9UJF2 1139 aa6.52□□□□□ -1.37
NUP88-212ENST00000576708 LSM7Q9UK45 103 aaKnown RBP6.52□□□□□ -1.37
NUP88-212ENST00000576708 PILRBQ9UKJ0 227 aa6.52□□□□□ -1.37
NUP88-212ENST00000576708 CLEC4EQ9ULY5 219 aa6.52□□□□□ -1.37
NUP88-212ENST00000576708 LAMA1P25391 3075 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 TNRC6BQ9UPQ9 1833 aaKnown RBP6.51□□□□□ -1.37
NUP88-212ENST00000576708 IGHV1OR15-9A0A0B4J2B8 117 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 SPAARA0A1B0GVQ0 90 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 A0A1W2PQ27 194 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 A0A1W2PQ64 194 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 A0A1W2PQD8 194 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 SLC12A8A0AV02 714 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 MED26O95402 600 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 C1QTNF9P0C862 333 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 FOSL1P15407 271 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms