RNA–Protein interactions for RNA: ENST00000576019.5

VPS53-219, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 3

Gene VPS53, Length 613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-219ENST00000576019 SPARCP09486 303 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 KCNA5P22460 613 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 FDXRP22570 491 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 MAPKAPK2P49137 400 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 PTH1RQ03431 593 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 RNASELQ05823 741 aaKnown RBP6.16□□□□□ -1.42
VPS53-219ENST00000576019 PTP4A2Q12974 167 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 BOP1Q14137 746 aaKnown RBP6.16□□□□□ -1.42
VPS53-219ENST00000576019 PLEKHO1Q53GL0 409 aaPredicted RBP6.16□□□□□ -1.42
VPS53-219ENST00000576019 LRCH2Q5VUJ6 765 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 INO80CQ6PI98 192 aaPredicted RBP6.16□□□□□ -1.42
VPS53-219ENST00000576019 ZC3H14Q6PJT7 736 aaKnown RBP6.16□□□□□ -1.42
VPS53-219ENST00000576019 DENND5BQ6ZUT9 1274 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 PPP1R32Q7Z5V6 425 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 CCDC91Q7Z6B0 441 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 SLFN11Q7Z7L1 901 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 SCML4Q8N228 414 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 FRMD1Q8N878 549 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 LSM14AQ8ND56 463 aaKnown RBP6.16□□□□□ -1.42
VPS53-219ENST00000576019 Q8NFD4 153 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 NLGN4YQ8NFZ3 816 aaPredicted RBP6.16□□□□□ -1.42
VPS53-219ENST00000576019 BPIFB1Q8TDL5 484 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 GCDHQ92947 438 aaPredicted RBP6.16□□□□□ -1.42
VPS53-219ENST00000576019 PERPQ96FX8 193 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 ZNF764Q96H86 408 aaPredicted RBP6.16□□□□□ -1.42
VPS53-219ENST00000576019 ZBED3Q96IU2 234 aaPredicted RBP6.16□□□□□ -1.42
VPS53-219ENST00000576019 PWWP2AQ96N64 755 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 KLHL32Q96NJ5 620 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 FMNL2Q96PY5 1086 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 HERC2P3Q9BVR0 1158 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 NDST4Q9H3R1 872 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 GSTO2Q9H4Y5 243 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 MROH8Q9H579 483 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 RABEP2Q9H5N1 569 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 HCFC1R1Q9NWW0 138 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 POLLQ9UGP5 575 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 CROTQ9UKG9 612 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 FAM184BQ9ULE4 1060 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 GDAQ9Y2T3 454 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 FAM169AQ9Y6X4 670 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 AK9Q5TCS8 1911 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 ZNF536O15090 1300 aa6.16□□□□□ -1.42
VPS53-219ENST00000576019 SPTAN1Q13813 2472 aaKnown RBP6.16□□□□□ -1.42
VPS53-219ENST00000576019 C2CD3Q4AC94 2353 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 A0A1W2PQ09 198 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 SAC3D1A6NKF1 404 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 H0Y626 953 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 TGFB1I1O43294 461 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 GUCY1B2O75343 617 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 CCNDBP1O95273 360 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 CHEK2O96017 543 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 HPXP02790 462 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 WEE2P0C1S8 567 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 FAM200BP0CF97 657 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 CD8BP10966 210 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 CYP2C9P11712 490 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 SCG2P13521 617 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 HGFP14210 728 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 FOSL1P15407 271 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 PRKCHP24723 683 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 PSMA3P25788 255 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 PPARGP37231 505 aaPredicted RBP6.15□□□□□ -1.42
VPS53-219ENST00000576019 GARSP41250 739 aaKnown RBP6.15□□□□□ -1.42
VPS53-219ENST00000576019 CSHL1Q14406 222 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 EIF4HQ15056 248 aaKnown RBP6.15□□□□□ -1.42
VPS53-219ENST00000576019 P3H1Q32P28 736 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 MGAT5BQ3V5L5 792 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 ADGRF1Q5T601 910 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 SHQ1Q6PI26 577 aaKnown RBP6.15□□□□□ -1.42
VPS53-219ENST00000576019 CYP20A1Q6UW02 462 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 SLC39A5Q6ZMH5 540 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 TRABD2AQ86V40 505 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 CCDC170Q8IYT3 715 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 FSIP1Q8NA03 581 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 ZBTB8BQ8NAP8 495 aaPredicted RBP6.15□□□□□ -1.42
VPS53-219ENST00000576019 PDPRQ8NCN5 879 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 OR5M3Q8NGP4 307 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 DNAJB14Q8TBM8 379 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 SCFD2Q8WU76 684 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 TRIB2Q92519 343 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 ELP4Q96EB1 424 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 HIC2Q96JB3 615 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 PARK7Q99497 189 aaKnown RBP6.15□□□□□ -1.42
VPS53-219ENST00000576019 PIP5K1AQ99755 562 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 TEX13AQ9BXU3 409 aaPredicted RBP6.15□□□□□ -1.42
VPS53-219ENST00000576019 INTS2Q9H0H0 1204 aaKnown RBP6.15□□□□□ -1.42
VPS53-219ENST00000576019 SIK2Q9H0K1 926 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 CCDC134Q9H6E4 229 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 BARX1Q9HBU1 254 aaPredicted RBP6.15□□□□□ -1.42
VPS53-219ENST00000576019 LIN7CQ9NUP9 197 aaKnown RBP6.15□□□□□ -1.42
VPS53-219ENST00000576019 NCDNQ9UBB6 729 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 EIF2B4Q9UI10 523 aaKnown RBP6.15□□□□□ -1.42
VPS53-219ENST00000576019 SARDHQ9UL12 918 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 BAG5Q9UL15 447 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 RCE1Q9Y256 329 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 VWA7Q9Y334 891 aa6.15□□□□□ -1.42
VPS53-219ENST00000576019 RELNP78509 3460 aa6.15□□□□□ -1.43
VPS53-219ENST00000576019 ZNF804BA4D1E1 1349 aa6.15□□□□□ -1.43
VPS53-219ENST00000576019 FLT1P17948 1338 aa6.15□□□□□ -1.43
VPS53-219ENST00000576019 ZNF521Q96K83 1311 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms