RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 BAG5Q9UL15 447 aa5.19□□□□□ -1.58
TOPBP1-210ENST00000572787 BARX2Q9UMQ3 279 aaPredicted RBP5.19□□□□□ -1.58
TOPBP1-210ENST00000572787 CARD8Q9Y2G2 431 aa5.19□□□□□ -1.58
TOPBP1-210ENST00000572787 TDRKHQ9Y2W6 561 aaKnown RBP5.19□□□□□ -1.58
TOPBP1-210ENST00000572787 HTR3EA5X5Y0 456 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 TMEM233B4DJY2 109 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 F8VZ95 297 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 RAB27BO00194 218 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 ZNF185O15231 689 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 CACNG3O60359 315 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 LARGE1O95461 756 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 PRAMEF12O95522 483 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 LY86O95711 162 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 SERPINC1P01008 464 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 MPOP05164 745 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 UROSP10746 265 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 BMP2P12643 396 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 CCDC130P13994 396 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 COX7A2P14406 83 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 ZFXP17010 805 aaPredicted RBP5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 PBX3P40426 434 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 PRKCIP41743 596 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 MAGEA10P43363 369 aaPredicted RBP5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 SLC6A9P48067 706 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 RAB28P51157 221 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 MFAP4P55083 255 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 NME5P56597 212 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 IL24Q13007 206 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 ATP1A4Q13733 1029 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 DDX39BQ13838 428 aaKnown RBP5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 ZNF273Q14593 569 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 GRM4Q14833 912 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 TBRG1Q3YBR2 411 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 EXOSC6Q5RKV6 272 aaKnown RBP5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 RBM20Q5T481 1227 aaKnown RBP5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 STXBP5Q5T5C0 1151 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 CDC73Q6P1J9 531 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 PARS2Q7L3T8 475 aaKnown RBP5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 KLHL7Q8IXQ5 586 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 DDIASQ8IXT1 998 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 ELMOD2Q8IZ81 293 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 KRT222Q8N1A0 295 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 FSTL5Q8N475 847 aaPredicted RBP5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 PI4KAP1Q8N8J0 262 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 ST7LQ8TDW4 575 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 HMGB4Q8WW32 186 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 SMARCE1Q969G3 411 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 FAM149B1Q96BN6 582 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 INTS12Q96CB8 462 aaKnown RBP5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 GRAMD1AQ96CP6 724 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 HDAC11Q96DB2 347 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 MRPL38Q96DV4 380 aaKnown RBP5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 ELP4Q96EB1 424 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 KLHDC7BQ96G42 594 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 PIWIL1Q96J94 861 aaKnown RBP5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 FAM84AQ96KN4 292 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 HS6ST2Q96MM7 605 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 GDAP1L1Q96MZ0 367 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 NUDCD1Q96RS6 583 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 CDK5RAP1Q96SZ6 601 aaKnown RBP5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 CD180Q99467 661 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 RAD9AQ99638 391 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 FOXB1Q99853 325 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 RIOK1Q9BRS2 568 aaKnown RBP5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 PIMREGQ9BSJ6 248 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 NUP85Q9BW27 656 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 CDADC1Q9BWV3 514 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 TRIM2Q9C040 744 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 CCSER1Q9C0I3 900 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 NACA2Q9H009 215 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 MTG2Q9H4K7 406 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 TFB2MQ9H5Q4 396 aaKnown RBP5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 BARX1Q9HBU1 254 aaPredicted RBP5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 SYTL2Q9HCH5 934 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 ALKBH4Q9NXW9 302 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 BTG4Q9NY30 223 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 ANKMY1Q9P2S6 941 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 MALT1Q9UDY8 824 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 BAIAP2L1Q9UHR4 511 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 MAD2L2Q9UI95 211 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 NAGPAQ9UK23 515 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 CCPG1Q9ULG6 757 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 X6R8D5 127 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 AOX1Q06278 1338 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 RPTORQ8N122 1335 aa5.18□□□□□ -1.58
TOPBP1-210ENST00000572787 TNIKQ9UKE5 1360 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 PNMA6EA0A0J9YXQ4 647 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 LOC102723971A0A1B0GUV8 181 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 ACOD1A6NK06 481 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 SH2D7A6NKC9 451 aaPredicted RBP5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 CAPN14A8MX76 684 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 H0Y8G0 127 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 CCDC188H7C350 402 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 J3KTA2 159 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 MYO1CO00159 1063 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 E2F3O00716 465 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 PLSCR1O15162 318 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 GRM6O15303 877 aa5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 FGF10O15520 208 aaPredicted RBP5.17□□□□□ -1.58
TOPBP1-210ENST00000572787 GPRIN2O60269 458 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms