RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 OR7D4Q8NG98 312 aa21.21■□□□□ 0.99
CHMP6-204ENST00000572778 DNAJC7Q99615 494 aa21.21■□□□□ 0.99
CHMP6-204ENST00000572778 SPON2Q9BUD6 331 aa21.21■□□□□ 0.99
CHMP6-204ENST00000572778 C2orf49Q9BVC5 232 aaPredicted RBP21.21■□□□□ 0.99
CHMP6-204ENST00000572778 THAP2Q9H0W7 228 aa21.21■□□□□ 0.99
CHMP6-204ENST00000572778 ILVBLA1L0T0 632 aa21.2■□□□□ 0.98
CHMP6-204ENST00000572778 BCLAF3A2AJT9 711 aaKnown RBP21.2■□□□□ 0.98
CHMP6-204ENST00000572778 CREB3O43889 395 aa21.2■□□□□ 0.98
CHMP6-204ENST00000572778 SNAP91O60641 907 aa21.2■□□□□ 0.98
CHMP6-204ENST00000572778 RNASEH1O60930 286 aaKnown RBP21.2■□□□□ 0.98
CHMP6-204ENST00000572778 RNF8O76064 485 aa21.2■□□□□ 0.98
CHMP6-204ENST00000572778 DNTTP04053 509 aa21.2■□□□□ 0.98
CHMP6-204ENST00000572778 RHOQP17081 205 aa21.2■□□□□ 0.98
CHMP6-204ENST00000572778 L1CAMP32004 1257 aa21.2■□□□□ 0.98
CHMP6-204ENST00000572778 PTGER3P43115 390 aa21.2■□□□□ 0.98
CHMP6-204ENST00000572778 AIF1P55008 147 aa21.2■□□□□ 0.98
CHMP6-204ENST00000572778 ADKP55263 362 aaKnown RBP21.2■□□□□ 0.98
CHMP6-204ENST00000572778 ZNF252P-AS1Q0IIN9 211 aa21.2■□□□□ 0.98
CHMP6-204ENST00000572778 ARID5BQ14865 1188 aa21.2■□□□□ 0.98
CHMP6-204ENST00000572778 SPDYCQ5MJ68 293 aa21.2■□□□□ 0.98
CHMP6-204ENST00000572778 C9orf64Q5T6V5 341 aa21.2■□□□□ 0.98
CHMP6-204ENST00000572778 ZNF776Q68DI1 518 aaPredicted RBP21.2■□□□□ 0.98
CHMP6-204ENST00000572778 FAM124AQ86V42 546 aa21.2■□□□□ 0.98
CHMP6-204ENST00000572778 FNIP1Q8TF40 1166 aa21.2■□□□□ 0.98
CHMP6-204ENST00000572778 TOE1Q96GM8 510 aaKnown RBP21.2■□□□□ 0.98
CHMP6-204ENST00000572778 PSMB7Q99436 277 aa21.2■□□□□ 0.98
CHMP6-204ENST00000572778 RBSNQ9H1K0 784 aa21.2■□□□□ 0.98
CHMP6-204ENST00000572778 DEF6Q9H4E7 631 aa21.2■□□□□ 0.98
CHMP6-204ENST00000572778 SMOC1Q9H4F8 434 aa21.2■□□□□ 0.98
CHMP6-204ENST00000572778 ABHD10Q9NUJ1 306 aa21.2■□□□□ 0.98
CHMP6-204ENST00000572778 ZNF212Q9UDV6 495 aa21.2■□□□□ 0.98
CHMP6-204ENST00000572778 PCSK1NQ9UHG2 260 aa21.2■□□□□ 0.98
CHMP6-204ENST00000572778 DNAI1Q9UI46 699 aa21.2■□□□□ 0.98
CHMP6-204ENST00000572778 RIF1Q5UIP0 2472 aaKnown RBP21.2■□□□□ 0.98
CHMP6-204ENST00000572778 OTOGLQ3ZCN5 2332 aa21.2■□□□□ 0.98
CHMP6-204ENST00000572778 EML5Q05BV3 1969 aa21.19■□□□□ 0.98
CHMP6-204ENST00000572778 MUC22E2RYF6 1773 aaPredicted RBP21.19■□□□□ 0.98
CHMP6-204ENST00000572778 MFAP3LO75121 409 aa21.19■□□□□ 0.98
CHMP6-204ENST00000572778 VAV1P15498 845 aa21.19■□□□□ 0.98
CHMP6-204ENST00000572778 OXTRP30559 389 aa21.19■□□□□ 0.98
CHMP6-204ENST00000572778 GFPT1Q06210 699 aaPredicted RBP21.19■□□□□ 0.98
CHMP6-204ENST00000572778 LYSMD4Q5XG99 296 aa21.19■□□□□ 0.98
CHMP6-204ENST00000572778 ZNF783Q6ZMS7 281 aa21.19■□□□□ 0.98
CHMP6-204ENST00000572778 STK40Q8N2I9 435 aa21.19■□□□□ 0.98
CHMP6-204ENST00000572778 DCAF4L2Q8NA75 395 aa21.19■□□□□ 0.98
CHMP6-204ENST00000572778 PIGKQ92643 395 aa21.19■□□□□ 0.98
CHMP6-204ENST00000572778 PTPRN2Q92932 1015 aa21.19■□□□□ 0.98
CHMP6-204ENST00000572778 EPAS1Q99814 870 aa21.19■□□□□ 0.98
CHMP6-204ENST00000572778 RSPH9Q9H1X1 276 aaPredicted RBP21.19■□□□□ 0.98
CHMP6-204ENST00000572778 ATP13A1Q9HD20 1204 aa21.19■□□□□ 0.98
CHMP6-204ENST00000572778 GPATCH2LQ9NWQ4 482 aa21.19■□□□□ 0.98
CHMP6-204ENST00000572778 WSB2Q9NYS7 404 aaPredicted RBP21.19■□□□□ 0.98
CHMP6-204ENST00000572778 VPS51Q9UID3 782 aa21.19■□□□□ 0.98
CHMP6-204ENST00000572778 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.19■□□□□ 0.98
CHMP6-204ENST00000572778 EP300Q09472 2414 aaPredicted RBP21.18■□□□□ 0.98
CHMP6-204ENST00000572778 ZNF806P0C7X5 589 aa21.18■□□□□ 0.98
CHMP6-204ENST00000572778 EPHB2P29323 1055 aa21.18■□□□□ 0.98
CHMP6-204ENST00000572778 GNA12Q03113 381 aa21.18■□□□□ 0.98
CHMP6-204ENST00000572778 ZBTB16Q05516 673 aa21.18■□□□□ 0.98
CHMP6-204ENST00000572778 SF3A2Q15428 464 aaKnown RBP21.18■□□□□ 0.98
CHMP6-204ENST00000572778 DLG2Q15700 870 aa21.18■□□□□ 0.98
CHMP6-204ENST00000572778 IL31Q6EBC2 164 aa21.18■□□□□ 0.98
CHMP6-204ENST00000572778 LINGO4Q6UY18 593 aa21.18■□□□□ 0.98
CHMP6-204ENST00000572778 PRR23CQ6ZRP0 262 aa21.18■□□□□ 0.98
CHMP6-204ENST00000572778 NLRP14Q86W24 1093 aa21.18■□□□□ 0.98
CHMP6-204ENST00000572778 MMAAQ8IVH4 418 aaKnown RBP21.18■□□□□ 0.98
CHMP6-204ENST00000572778 SH2D3CQ8N5H7 860 aa21.18■□□□□ 0.98
CHMP6-204ENST00000572778 ARFGAP1Q8N6T3 406 aa21.18■□□□□ 0.98
CHMP6-204ENST00000572778 C12orf50Q8NA57 414 aaPredicted RBP21.18■□□□□ 0.98
CHMP6-204ENST00000572778 ATP11CQ8NB49 1132 aa21.18■□□□□ 0.98
CHMP6-204ENST00000572778 GANCQ8TET4 914 aa21.18■□□□□ 0.98
CHMP6-204ENST00000572778 FRS2Q8WU20 508 aa21.18■□□□□ 0.98
CHMP6-204ENST00000572778 GPR174Q9BXC1 333 aa21.18■□□□□ 0.98
CHMP6-204ENST00000572778 RETREG1Q9H6L5 497 aa21.18■□□□□ 0.98
CHMP6-204ENST00000572778 VPS45Q9NRW7 570 aa21.18■□□□□ 0.98
CHMP6-204ENST00000572778 NDFIP2Q9NV92 336 aa21.18■□□□□ 0.98
CHMP6-204ENST00000572778 TMEM248Q9NWD8 314 aa21.18■□□□□ 0.98
CHMP6-204ENST00000572778 AP4E1Q9UPM8 1137 aa21.18■□□□□ 0.98
CHMP6-204ENST00000572778 PTPRZ1P23471 2315 aaPredicted RBP21.18■□□□□ 0.98
CHMP6-204ENST00000572778 FAM186AA6NE01 2351 aa21.17■□□□□ 0.98
CHMP6-204ENST00000572778 AKR1B15C9JRZ8 316 aaPredicted RBP21.17■□□□□ 0.98
CHMP6-204ENST00000572778 CBX4O00257 560 aa21.17■□□□□ 0.98
CHMP6-204ENST00000572778 ATP9BO43861 1147 aa21.17■□□□□ 0.98
CHMP6-204ENST00000572778 PRPSAP2O60256 369 aa21.17■□□□□ 0.98
CHMP6-204ENST00000572778 MT-CO1P00395 513 aa21.17■□□□□ 0.98
CHMP6-204ENST00000572778 SRCP12931 536 aa21.17■□□□□ 0.98
CHMP6-204ENST00000572778 GLDCP23378 1020 aa21.17■□□□□ 0.98
CHMP6-204ENST00000572778 MIPP30301 263 aa21.17■□□□□ 0.98
CHMP6-204ENST00000572778 MAPKAPK2P49137 400 aa21.17■□□□□ 0.98
CHMP6-204ENST00000572778 VASPP50552 380 aaPredicted RBP21.17■□□□□ 0.98
CHMP6-204ENST00000572778 GALCP54803 685 aa21.17■□□□□ 0.98
CHMP6-204ENST00000572778 LMNB2Q03252 620 aa21.17■□□□□ 0.98
CHMP6-204ENST00000572778 ZNF33AQ06730 810 aa21.17■□□□□ 0.98
CHMP6-204ENST00000572778 TTC31Q49AM3 519 aaPredicted RBP21.17■□□□□ 0.98
CHMP6-204ENST00000572778 PLA2G2CQ5R387 149 aa21.17■□□□□ 0.98
CHMP6-204ENST00000572778 CNGA4Q8IV77 575 aa21.17■□□□□ 0.98
CHMP6-204ENST00000572778 SLC41A1Q8IVJ1 513 aa21.17■□□□□ 0.98
CHMP6-204ENST00000572778 ARHGEF26Q96DR7 871 aa21.17■□□□□ 0.98
CHMP6-204ENST00000572778 HSPA12BQ96MM6 686 aa21.17■□□□□ 0.98
CHMP6-204ENST00000572778 FAM129BQ96TA1 746 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms