RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 LRRC40Q9H9A6 602 aa17.82■□□□□ 0.44
SCARF1-205ENST00000571272 C6orf203Q9P0P8 240 aaPredicted RBP17.82■□□□□ 0.44
SCARF1-205ENST00000571272 VANGL2Q9ULK5 521 aa17.82■□□□□ 0.44
SCARF1-205ENST00000571272 LZTS1Q9Y250 596 aa17.82■□□□□ 0.44
SCARF1-205ENST00000571272 AK5Q9Y6K8 562 aa17.82■□□□□ 0.44
SCARF1-205ENST00000571272 SMIM31A0A1B0GVY4 71 aa17.82■□□□□ 0.44
SCARF1-205ENST00000571272 KPNA7A9QM74 516 aa17.82■□□□□ 0.44
SCARF1-205ENST00000571272 CLPTM1O96005 669 aa17.82■□□□□ 0.44
SCARF1-205ENST00000571272 TFAP2AP05549 437 aa17.82■□□□□ 0.44
SCARF1-205ENST00000571272 MS4A2Q01362 244 aa17.82■□□□□ 0.44
SCARF1-205ENST00000571272 R3HDM1Q15032 1099 aaKnown RBP17.82■□□□□ 0.44
SCARF1-205ENST00000571272 PDK1Q15118 436 aa17.82■□□□□ 0.44
SCARF1-205ENST00000571272 CERCAMQ5T4B2 595 aa17.82■□□□□ 0.44
SCARF1-205ENST00000571272 ZNF618Q5T7W0 954 aa17.82■□□□□ 0.44
SCARF1-205ENST00000571272 PAOXQ6QHF9 649 aa17.82■□□□□ 0.44
SCARF1-205ENST00000571272 ANKRD52Q8NB46 1076 aa17.82■□□□□ 0.44
SCARF1-205ENST00000571272 SLC2A14Q8TDB8 520 aa17.82■□□□□ 0.44
SCARF1-205ENST00000571272 HIC2Q96JB3 615 aa17.82■□□□□ 0.44
SCARF1-205ENST00000571272 CATSPER2Q96P56 530 aa17.82■□□□□ 0.44
SCARF1-205ENST00000571272 SLC39A10Q9ULF5 831 aa17.82■□□□□ 0.44
SCARF1-205ENST00000571272 RGSL1A5PLK6 1076 aa17.81■□□□□ 0.44
SCARF1-205ENST00000571272 CRTAMO95727 393 aa17.81■□□□□ 0.44
SCARF1-205ENST00000571272 TPH1P17752 444 aa17.81■□□□□ 0.44
SCARF1-205ENST00000571272 TCN1P20061 433 aaPredicted RBP17.81■□□□□ 0.44
SCARF1-205ENST00000571272 MAGEA12P43365 314 aa17.81■□□□□ 0.44
SCARF1-205ENST00000571272 GLUD2P49448 558 aa17.81■□□□□ 0.44
SCARF1-205ENST00000571272 METTL21CQ5VZV1 264 aa17.81■□□□□ 0.44
SCARF1-205ENST00000571272 BNC2Q6ZN30 1099 aaPredicted RBP17.81■□□□□ 0.44
SCARF1-205ENST00000571272 APOBEC3FQ8IUX4 373 aaKnown RBP17.81■□□□□ 0.44
SCARF1-205ENST00000571272 MARVELD2Q8N4S9 558 aa17.81■□□□□ 0.44
SCARF1-205ENST00000571272 SERPINI1Q99574 410 aa17.81■□□□□ 0.44
SCARF1-205ENST00000571272 AP4B1Q9Y6B7 739 aa17.81■□□□□ 0.44
SCARF1-205ENST00000571272 ZCWPW2A0A1B0GU75 182 aa17.81■□□□□ 0.44
SCARF1-205ENST00000571272 PIGNO95427 931 aa17.81■□□□□ 0.44
SCARF1-205ENST00000571272 ZNF286BP0CG31 522 aa17.81■□□□□ 0.44
SCARF1-205ENST00000571272 MATKP42679 507 aa17.81■□□□□ 0.44
SCARF1-205ENST00000571272 BCAT1P54687 386 aa17.81■□□□□ 0.44
SCARF1-205ENST00000571272 TTLL12Q14166 644 aaPredicted RBP17.81■□□□□ 0.44
SCARF1-205ENST00000571272 DALRD3Q5D0E6 543 aaKnown RBP17.81■□□□□ 0.44
SCARF1-205ENST00000571272 STRADAQ7RTN6 431 aa17.81■□□□□ 0.44
SCARF1-205ENST00000571272 PIP4K2CQ8TBX8 421 aa17.81■□□□□ 0.44
SCARF1-205ENST00000571272 SREK1Q8WXA9 508 aaKnown RBP17.81■□□□□ 0.44
SCARF1-205ENST00000571272 PRICKLE1Q96MT3 831 aaPredicted RBP17.81■□□□□ 0.44
SCARF1-205ENST00000571272 GRIP2Q9C0E4 1043 aa17.81■□□□□ 0.44
SCARF1-205ENST00000571272 TASP1Q9H6P5 420 aa17.81■□□□□ 0.44
SCARF1-205ENST00000571272 TXNRD2Q9NNW7 524 aa17.81■□□□□ 0.44
SCARF1-205ENST00000571272 IARS2Q9NSE4 1012 aaKnown RBP17.81■□□□□ 0.44
SCARF1-205ENST00000571272 BFARQ9NZS9 450 aa17.81■□□□□ 0.44
SCARF1-205ENST00000571272 PPP1R1BQ9UD71 204 aaPredicted RBP17.81■□□□□ 0.44
SCARF1-205ENST00000571272 MATN2O00339 956 aa17.81■□□□□ 0.44
SCARF1-205ENST00000571272 JUNP05412 331 aaKnown RBP17.81■□□□□ 0.44
SCARF1-205ENST00000571272 GRIA4P48058 902 aa17.81■□□□□ 0.44
SCARF1-205ENST00000571272 TMEM62Q0P6H9 643 aa17.81■□□□□ 0.44
SCARF1-205ENST00000571272 CYLC2Q14093 348 aaPredicted RBP17.81■□□□□ 0.44
SCARF1-205ENST00000571272 Q3C1V9 767 aa17.81■□□□□ 0.44
SCARF1-205ENST00000571272 LRRC23Q53EV4 343 aaPredicted RBP17.81■□□□□ 0.44
SCARF1-205ENST00000571272 ARL13AQ5H913 290 aaPredicted RBP17.81■□□□□ 0.44
SCARF1-205ENST00000571272 RARS2Q5T160 578 aaKnown RBP17.81■□□□□ 0.44
SCARF1-205ENST00000571272 SEL1L3Q68CR1 1132 aa17.81■□□□□ 0.44
SCARF1-205ENST00000571272 C16orf89Q6UX73 402 aa17.81■□□□□ 0.44
SCARF1-205ENST00000571272 LILRA2Q8N149 483 aa17.81■□□□□ 0.44
SCARF1-205ENST00000571272 METTL25Q8N6Q8 603 aa17.81■□□□□ 0.44
SCARF1-205ENST00000571272 FAM156AQ8NDB6 213 aa17.81■□□□□ 0.44
SCARF1-205ENST00000571272 BHLHE22Q8NFJ8 381 aaPredicted RBP17.81■□□□□ 0.44
SCARF1-205ENST00000571272 DGCR14Q96DF8 476 aaKnown RBP17.81■□□□□ 0.44
SCARF1-205ENST00000571272 MPHOSPH6Q99547 160 aaKnown RBP17.81■□□□□ 0.44
SCARF1-205ENST00000571272 CHRAC1Q9NRG0 131 aa17.81■□□□□ 0.44
SCARF1-205ENST00000571272 C20orf96Q9NUD7 363 aaPredicted RBP17.81■□□□□ 0.44
SCARF1-205ENST00000571272 ADAM28Q9UKQ2 775 aa17.81■□□□□ 0.44
SCARF1-205ENST00000571272 TMEM114B3SHH9 223 aa17.8■□□□□ 0.44
SCARF1-205ENST00000571272 PHGDHO43175 533 aaKnown RBP17.8■□□□□ 0.44
SCARF1-205ENST00000571272 DENRO43583 198 aaKnown RBP17.8■□□□□ 0.44
SCARF1-205ENST00000571272 USP2O75604 605 aaPredicted RBP17.8■□□□□ 0.44
SCARF1-205ENST00000571272 SRGAP2BP0DMP2 458 aa17.8■□□□□ 0.44
SCARF1-205ENST00000571272 NAGLUP54802 743 aa17.8■□□□□ 0.44
SCARF1-205ENST00000571272 MPP3Q13368 585 aa17.8■□□□□ 0.44
SCARF1-205ENST00000571272 CEACAM7Q14002 265 aa17.8■□□□□ 0.44
SCARF1-205ENST00000571272 MAP7Q14244 749 aa17.8■□□□□ 0.44
SCARF1-205ENST00000571272 ZNF423Q2M1K9 1284 aa17.8■□□□□ 0.44
SCARF1-205ENST00000571272 C6orf52Q5T4I8 152 aa17.8■□□□□ 0.44
SCARF1-205ENST00000571272 ARHGAP17Q68EM7 881 aa17.8■□□□□ 0.44
SCARF1-205ENST00000571272 CLEC14AQ86T13 490 aa17.8■□□□□ 0.44
SCARF1-205ENST00000571272 ACE2Q9BYF1 805 aaPredicted RBP17.8■□□□□ 0.44
SCARF1-205ENST00000571272 UNKQ9C0B0 810 aaKnown RBP17.8■□□□□ 0.44
SCARF1-205ENST00000571272 OXSMQ9NWU1 459 aa17.8■□□□□ 0.44
SCARF1-205ENST00000571272 UBP1Q9NZI7 540 aa17.8■□□□□ 0.44
SCARF1-205ENST00000571272 ZDHHC2Q9UIJ5 367 aa17.8■□□□□ 0.44
SCARF1-205ENST00000571272 VILLO15195 856 aa17.8■□□□□ 0.44
SCARF1-205ENST00000571272 HDAC3O15379 428 aa17.8■□□□□ 0.44
SCARF1-205ENST00000571272 LGALS2P05162 132 aa17.8■□□□□ 0.44
SCARF1-205ENST00000571272 TFEBP19484 476 aa17.8■□□□□ 0.44
SCARF1-205ENST00000571272 AVPR1AP37288 418 aa17.8■□□□□ 0.44
SCARF1-205ENST00000571272 DPP6P42658 865 aa17.8■□□□□ 0.44
SCARF1-205ENST00000571272 RPL5P46777 297 aaKnown RBP17.8■□□□□ 0.44
SCARF1-205ENST00000571272 ADIGQ0VDE8 80 aa17.8■□□□□ 0.44
SCARF1-205ENST00000571272 SLC25A52Q3SY17 297 aa17.8■□□□□ 0.44
SCARF1-205ENST00000571272 NADK2Q4G0N4 442 aa17.8■□□□□ 0.44
SCARF1-205ENST00000571272 ISL2Q96A47 359 aa17.8■□□□□ 0.44
SCARF1-205ENST00000571272 VPS39Q96JC1 886 aa17.8■□□□□ 0.44
SCARF1-205ENST00000571272 PRPF18Q99633 342 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms