RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 TBC1D3EA0A087X179 549 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 TBC1D3KA0A087X1G2 549 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 TARSL2A2RTX5 802 aaKnown RBP7.19□□□□□ -1.26
CHD3-213ENST00000571249 HEATR9A2RTY3 570 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 TBC1D3FA6NER0 549 aaPredicted RBP7.19□□□□□ -1.26
CHD3-213ENST00000571249 TBC1D3LB9A6J9 549 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.19□□□□□ -1.26
CHD3-213ENST00000571249 LATO43561 262 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 KRT86O43790 486 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 JAK2O60674 1132 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 RNASEH1O60930 286 aaKnown RBP7.19□□□□□ -1.26
CHD3-213ENST00000571249 SORBS2O94875 1100 aaKnown RBP7.19□□□□□ -1.26
CHD3-213ENST00000571249 ITGB3P05106 788 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 HSP90AA1P07900 732 aaKnown RBP7.19□□□□□ -1.26
CHD3-213ENST00000571249 ZDHHC11BP0C7U3 371 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 TBC1D3HP0C7X1 549 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 PTMSP20962 102 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 MUTP22033 750 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 MPSTP25325 297 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 ITGB7P26010 798 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 PSMA5P28066 241 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 TFAMQ00059 246 aaKnown RBP7.19□□□□□ -1.26
CHD3-213ENST00000571249 CDC20Q12834 499 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 NR0B2Q15466 257 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 HAUS3Q68CZ6 603 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 TBC1D3GQ6DHY5 549 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 TBC1D3CQ6IPX1 549 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 ZCCHC8Q6NZY4 707 aaKnown RBP7.19□□□□□ -1.26
CHD3-213ENST00000571249 Q6ZNB5 142 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 C1orf186Q6ZWK4 172 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 ZC3H3Q8IXZ2 948 aaKnown RBP7.19□□□□□ -1.26
CHD3-213ENST00000571249 TBC1D3Q8IZP1 549 aaPredicted RBP7.19□□□□□ -1.26
CHD3-213ENST00000571249 OR6B3Q8NGW1 331 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 KBTBD7Q8WVZ9 684 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 ZSCAN31Q96LW9 406 aaPredicted RBP7.19□□□□□ -1.26
CHD3-213ENST00000571249 NOX5Q96PH1 765 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 TRIM8Q9BZR9 551 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 ZNF518BQ9C0D4 1074 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 STRADBQ9C0K7 418 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 CBX8Q9HC52 389 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 SUN2Q9UH99 717 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 KCNG1Q9UIX4 513 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 TLK1Q9UKI8 766 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 TPX2Q9ULW0 747 aaKnown RBP7.19□□□□□ -1.26
CHD3-213ENST00000571249 KCNMB2Q9Y691 235 aa7.19□□□□□ -1.26
CHD3-213ENST00000571249 ZNF106Q9H2Y7 1883 aaKnown RBP7.19□□□□□ -1.26
CHD3-213ENST00000571249 TGP01266 2768 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 A0A1W2PQM1 296 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 SLC12A8A0AV02 714 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 MKRN2OSH3BPM6 223 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 STMND1H3BQB6 276 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 CLDN5O00501 218 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 MDM4O15151 490 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 KRT19P08727 400 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 CCL4P13236 92 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 CD1EP15812 388 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 XBP1P17861 261 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 SLC8A1P32418 973 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 UGT1A3P35503 534 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 ATP5C1P36542 298 aaKnown RBP7.18□□□□□ -1.26
CHD3-213ENST00000571249 ADPRHP54922 357 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 HDAC4P56524 1084 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 CCL7P80098 99 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 ZRSR2Q15696 482 aaKnown RBP7.18□□□□□ -1.26
CHD3-213ENST00000571249 CST6Q15828 149 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 C16orf46Q6P387 395 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 SLC39A4Q6P5W5 647 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 RUFY3Q7L099 469 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 CHST9Q7L1S5 443 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 MMAAQ8IVH4 418 aaKnown RBP7.18□□□□□ -1.26
CHD3-213ENST00000571249 SLC35F3Q8IY50 421 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 UNC5BQ8IZJ1 945 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 AADATQ8N5Z0 425 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 CSGALNACT2Q8N6G5 542 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 LRRC52Q8N7C0 313 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 C1orf127Q8N9H9 656 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 ZNF548Q8NEK5 533 aaPredicted RBP7.18□□□□□ -1.26
CHD3-213ENST00000571249 TNFRSF25Q93038 417 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 FAM84AQ96KN4 292 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 RANBP9Q96S59 729 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 KCNK16Q96T55 309 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 DNAJC28Q9NX36 388 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 NCKIPSDQ9NZQ3 722 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 KLF15Q9UIH9 416 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 FZD4Q9ULV1 537 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 LIMCH1Q9UPQ0 1083 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 DNM3Q9UQ16 869 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 CYP46A1Q9Y6A2 500 aa7.18□□□□□ -1.26
CHD3-213ENST00000571249 D6RAR5 112 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 PRAMEF26H0Y7S4 382 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 TMX2-CTNND1H3BSU7 103 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 ZG16O60844 167 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 DTNBO60941 627 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 SIN3BO75182 1162 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 STC2O76061 302 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 STK10O94804 968 aaKnown RBP7.17□□□□□ -1.26
CHD3-213ENST00000571249 PIGRP01833 764 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 KLKB1P03952 638 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 CYBBP04839 570 aa7.17□□□□□ -1.26
CHD3-213ENST00000571249 GOT1P17174 413 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms