RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 HIST2H2BCQ6DN03 193 aa10.78□□□□□ -0.68
CTDNEP1-202ENST00000570380 ZCCHC8Q6NZY4 707 aaKnown RBP10.78□□□□□ -0.68
CTDNEP1-202ENST00000570380 APCDD1Q8J025 514 aa10.78□□□□□ -0.68
CTDNEP1-202ENST00000570380 CFAP52Q8N1V2 620 aa10.78□□□□□ -0.68
CTDNEP1-202ENST00000570380 HJURPQ8NCD3 748 aaPredicted RBP10.78□□□□□ -0.68
CTDNEP1-202ENST00000570380 IFT43Q96FT9 208 aa10.78□□□□□ -0.68
CTDNEP1-202ENST00000570380 BACH2Q9BYV9 841 aa10.78□□□□□ -0.68
CTDNEP1-202ENST00000570380 SLC25A18Q9H1K4 315 aa10.78□□□□□ -0.68
CTDNEP1-202ENST00000570380 EPN3Q9H201 632 aa10.78□□□□□ -0.68
CTDNEP1-202ENST00000570380 DMAC2Q9NW81 257 aa10.78□□□□□ -0.68
CTDNEP1-202ENST00000570380 DNAJC28Q9NX36 388 aa10.78□□□□□ -0.68
CTDNEP1-202ENST00000570380 KCNK4Q9NYG8 393 aa10.78□□□□□ -0.68
CTDNEP1-202ENST00000570380 LUC7L3O95232 432 aaKnown RBP10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 SLC11A2P49281 568 aa10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 NUMBP49757 651 aa10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 CLDN2P57739 230 aa10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 CYP4F2P78329 520 aa10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 FOXK1P85037 733 aa10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 CEBPZQ03701 1054 aaKnown RBP10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 CDH18Q13634 790 aa10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 DRAP1Q14919 205 aaPredicted RBP10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 CLCA4Q14CN2 919 aa10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 E2F4Q16254 413 aa10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 KNOP1Q1ED39 458 aaKnown RBP10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 SKIDA1Q1XH10 827 aa10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 RNF219Q5W0B1 726 aaPredicted RBP10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 CNNM4Q6P4Q7 775 aa10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 ABI3BPQ7Z7G0 1075 aa10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 C14orf80Q86SX3 495 aa10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 PTRH1Q86Y79 214 aaKnown RBP10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 UNC45BQ8IWX7 931 aa10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 ANKRD52Q8NB46 1076 aa10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 SLC4A11Q8NBS3 891 aa10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 TPCN2Q8NHX9 752 aa10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 FRS2Q8WU20 508 aa10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 TATDN2Q93075 761 aa10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 AZIN2Q96A70 460 aa10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 TMX3Q96JJ7 454 aa10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 SPAG5Q96R06 1193 aa10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 LRRC27Q9C0I9 530 aa10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 NIF3L1Q9GZT8 377 aa10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 SLC39A2Q9NP94 309 aa10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 ABCC13Q9NSE7 274 aa10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 GEMIN8Q9NWZ8 242 aaKnown RBP10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 CEP83Q9Y592 693 aa10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 PCDHGA7Q9Y5G6 932 aa10.77□□□□□ -0.69
CTDNEP1-202ENST00000570380 ITPR2Q14571 2701 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 A0A1W2PQU0 124 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 BLACEA4D250 179 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 ENO4A6NNW6 628 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 IKBKBO14920 756 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 PLD2O14939 933 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 EIF5BO60841 1220 aaKnown RBP10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 MOCS3O95396 460 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 WT1P19544 449 aaPredicted RBP10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 AFMP43652 599 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 RAD23BP54727 409 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 HNRNPKP61978 463 aaKnown RBP eCLIP10.76□□□□□ -0.695e-12■■□□□ 12.3
CTDNEP1-202ENST00000570380 ADIGQ0VDE8 80 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 MAPK8IP2Q13387 824 aaPredicted RBP10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 ZNF284Q2VY69 593 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 FAM46CQ5VWP2 391 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 NUGGCQ68CJ6 796 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 ARHGAP17Q68EM7 881 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 MSANTD2Q6P1R3 559 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 FAM173BQ6P4H8 233 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 GCNT7Q6ZNI0 430 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 UNC13DQ70J99 1090 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 ZNF548Q8NEK5 533 aaPredicted RBP10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 ZNF564Q8TBZ8 553 aaPredicted RBP10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 TMC2Q8TDI7 906 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 TAS1R2Q8TE23 839 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 HTR3CQ8WXA8 447 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 LIN37Q96GY3 246 aaPredicted RBP10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 BMFQ96LC9 184 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 C7orf25Q9BPX7 421 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 FUCA2Q9BTY2 467 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 NUCKS1Q9H1E3 243 aaKnown RBP10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 PREBQ9HCU5 417 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 KLF15Q9UIH9 416 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 SALL4Q9UJQ4 1053 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 ACSL6Q9UKU0 697 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 PPM1HQ9ULR3 514 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 SMC3Q9UQE7 1217 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 PCDHGA4Q9Y5G9 962 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 CSNK1G3Q9Y6M4 447 aa10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 SPENQ96T58 3664 aaKnown RBP10.76□□□□□ -0.69
CTDNEP1-202ENST00000570380 TYW5A2RUC4 315 aaKnown RBP10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 XPO1O14980 1071 aaKnown RBP10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 MUSKO15146 869 aa10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 LIPCP11150 499 aa10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 HNRNPA2B1P22626 353 aaKnown RBP10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 CASP1P29466 404 aa10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 AKT2P31751 481 aa10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 UGT1A5P35504 534 aa10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 NNMTP40261 264 aa10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 TBX4P57082 545 aa10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 SLC8A3P57103 927 aa10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 AMPD3Q01432 767 aa10.75□□□□□ -0.69
CTDNEP1-202ENST00000570380 FZD2Q14332 565 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms