RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 PSMB7Q99436 277 aa13.39□□□□□ -0.27
CNOT1-220ENST00000569916 NUP58Q9BVL2 599 aa13.39□□□□□ -0.27
CNOT1-220ENST00000569916 GPR174Q9BXC1 333 aa13.39□□□□□ -0.27
CNOT1-220ENST00000569916 ZYG11BQ9C0D3 744 aa13.39□□□□□ -0.27
CNOT1-220ENST00000569916 IFNKQ9P0W0 207 aa13.39□□□□□ -0.27
CNOT1-220ENST00000569916 EVLQ9UI08 416 aaPredicted RBP13.39□□□□□ -0.27
CNOT1-220ENST00000569916 VPS28Q9UK41 221 aa13.39□□□□□ -0.27
CNOT1-220ENST00000569916 NEU3Q9UQ49 428 aa13.39□□□□□ -0.27
CNOT1-220ENST00000569916 NUMA1Q14980 2115 aa13.39□□□□□ -0.27
CNOT1-220ENST00000569916 LAMA1P25391 3075 aa13.38□□□□□ -0.27
CNOT1-220ENST00000569916 KHNYNO15037 678 aaKnown RBP13.38□□□□□ -0.27
CNOT1-220ENST00000569916 ATMINO43313 823 aaPredicted RBP13.38□□□□□ -0.27
CNOT1-220ENST00000569916 DNTTP04053 509 aa13.38□□□□□ -0.27
CNOT1-220ENST00000569916 SKILP12757 684 aa13.38□□□□□ -0.27
CNOT1-220ENST00000569916 VAV1P15498 845 aa13.38□□□□□ -0.27
CNOT1-220ENST00000569916 OGDHQ02218 1023 aa13.38□□□□□ -0.27
CNOT1-220ENST00000569916 ARL13BQ3SXY8 428 aa13.38□□□□□ -0.27
CNOT1-220ENST00000569916 TRIM61Q5EBN2 209 aa13.38□□□□□ -0.27
CNOT1-220ENST00000569916 C6orf118Q5T5N4 469 aa13.38□□□□□ -0.27
CNOT1-220ENST00000569916 HGSNATQ68CP4 663 aa13.38□□□□□ -0.27
CNOT1-220ENST00000569916 LRSAM1Q6UWE0 723 aa13.38□□□□□ -0.27
CNOT1-220ENST00000569916 FAM124AQ86V42 546 aa13.38□□□□□ -0.27
CNOT1-220ENST00000569916 FRS2Q8WU20 508 aa13.38□□□□□ -0.27
CNOT1-220ENST00000569916 FOXJ1Q92949 421 aa13.38□□□□□ -0.27
CNOT1-220ENST00000569916 NTAN1Q96AB6 310 aa13.38□□□□□ -0.27
CNOT1-220ENST00000569916 RTKNQ9BST9 563 aa13.38□□□□□ -0.27
CNOT1-220ENST00000569916 EDEM2Q9BV94 578 aa13.38□□□□□ -0.27
CNOT1-220ENST00000569916 MAGEB5Q9BZ81 275 aa13.38□□□□□ -0.27
CNOT1-220ENST00000569916 MUC3BQ9H195 1237 aa13.38□□□□□ -0.27
CNOT1-220ENST00000569916 OSBPL2Q9H1P3 480 aa13.38□□□□□ -0.27
CNOT1-220ENST00000569916 PPARGC1AQ9UBK2 798 aaKnown RBP13.38□□□□□ -0.27
CNOT1-220ENST00000569916 OR12D3Q9UGF7 316 aa13.38□□□□□ -0.27
CNOT1-220ENST00000569916 SLC25A13Q9UJS0 675 aa13.38□□□□□ -0.27
CNOT1-220ENST00000569916 TP53BP1Q12888 1972 aaPredicted RBP13.38□□□□□ -0.27
CNOT1-220ENST00000569916 PLXNA2O75051 1894 aa13.38□□□□□ -0.27
CNOT1-220ENST00000569916 A0A0D9SEW6 157 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 ANKRD62A6NC57 917 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 FAM72CH0Y354 149 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 ATP9BO43861 1147 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 SNAP91O60641 907 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 GYPCP04921 128 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 GZMAP12544 262 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 OR1E1P30953 314 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 ACSL1P33121 698 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 NNMTP40261 264 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 IRX4P78413 519 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 SCAPQ12770 1279 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 MAMLD1Q13495 774 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 ELAVL3Q14576 367 aaKnown RBP13.37□□□□□ -0.27
CNOT1-220ENST00000569916 CST6Q15828 149 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 TTC31Q49AM3 519 aaPredicted RBP13.37□□□□□ -0.27
CNOT1-220ENST00000569916 STPG1Q5TH74 334 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 FAM72AQ5TYM5 149 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 PLEKHA7Q6IQ23 1121 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 FAM72DQ6L9T8 149 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 DCUN1D2Q6PH85 259 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 SLC23A3Q6PIS1 610 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 DGLUCYQ7Z3D6 616 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 FAM72BQ86X60 149 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 SH2D3CQ8N5H7 860 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 DCAF4L2Q8NA75 395 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 CADM4Q8NFZ8 388 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 SYN2Q92777 582 aaPredicted RBP13.37□□□□□ -0.27
CNOT1-220ENST00000569916 IQCDQ96DY2 449 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 FAM129BQ96TA1 746 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 CNPY3Q9BT09 278 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 XPO4Q9C0E2 1151 aaKnown RBP13.37□□□□□ -0.27
CNOT1-220ENST00000569916 PABPC3Q9H361 631 aaKnown RBP13.37□□□□□ -0.27
CNOT1-220ENST00000569916 TSPY26PQ9H489 355 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 VPS51Q9UID3 782 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 CAPN11Q9UMQ6 739 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 SCML1Q9UN30 329 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 HS3ST2Q9Y278 367 aa13.37□□□□□ -0.27
CNOT1-220ENST00000569916 CACNA1AO00555 2505 aa13.36□□□□□ -0.27
CNOT1-220ENST00000569916 ILVBLA1L0T0 632 aa13.36□□□□□ -0.27
CNOT1-220ENST00000569916 MEI4A8MW99 385 aa13.36□□□□□ -0.27
CNOT1-220ENST00000569916 MID1O15344 667 aa13.36□□□□□ -0.27
CNOT1-220ENST00000569916 RNASEH1O60930 286 aaKnown RBP13.36□□□□□ -0.27
CNOT1-220ENST00000569916 LRIG2O94898 1065 aa13.36□□□□□ -0.27
CNOT1-220ENST00000569916 FTLP02792 175 aaPredicted RBP13.36□□□□□ -0.27
CNOT1-220ENST00000569916 PLEKP08567 350 aaPredicted RBP13.36□□□□□ -0.27
CNOT1-220ENST00000569916 SRCP12931 536 aa13.36□□□□□ -0.27
CNOT1-220ENST00000569916 GLDCP23378 1020 aa13.36□□□□□ -0.27
CNOT1-220ENST00000569916 MAOBP27338 520 aa13.36□□□□□ -0.27
CNOT1-220ENST00000569916 KRT83P78385 493 aa13.36□□□□□ -0.27
CNOT1-220ENST00000569916 ZBED6P86452 979 aa13.36□□□□□ -0.27
CNOT1-220ENST00000569916 ZNF252P-AS1Q0IIN9 211 aa13.36□□□□□ -0.27
CNOT1-220ENST00000569916 NFKBIBQ15653 356 aa13.36□□□□□ -0.27
CNOT1-220ENST00000569916 DUOXA1Q1HG43 343 aa13.36□□□□□ -0.27
CNOT1-220ENST00000569916 TDRD12Q587J7 1177 aaKnown RBP13.36□□□□□ -0.27
CNOT1-220ENST00000569916 DCAF12L1Q5VU92 463 aa13.36□□□□□ -0.27
CNOT1-220ENST00000569916 ZNF783Q6ZMS7 281 aa13.36□□□□□ -0.27
CNOT1-220ENST00000569916 USP30Q70CQ3 517 aa13.36□□□□□ -0.27
CNOT1-220ENST00000569916 ERMP1Q7Z2K6 904 aa13.36□□□□□ -0.27
CNOT1-220ENST00000569916 SLFN11Q7Z7L1 901 aa13.36□□□□□ -0.27
CNOT1-220ENST00000569916 NLRP14Q86W24 1093 aa13.36□□□□□ -0.27
CNOT1-220ENST00000569916 MMAAQ8IVH4 418 aaKnown RBP13.36□□□□□ -0.27
CNOT1-220ENST00000569916 DRC7Q8IY82 874 aa13.36□□□□□ -0.27
CNOT1-220ENST00000569916 PYROXD2Q8N2H3 581 aa13.36□□□□□ -0.27
CNOT1-220ENST00000569916 STK40Q8N2I9 435 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms