RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 A0A1W2PQ45 241 aaPredicted RBP5.51□□□□□ -1.53
SF3B3-213ENST00000569687 A0A1W2PQY0 241 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 HMX2A2RU54 273 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 CFAP73A6NFT4 308 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 TRIM49D1C9J1S8 452 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 ANKRD65E5RJM6 399 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 TK2O00142 265 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 FGF10O15520 208 aaPredicted RBP5.51□□□□□ -1.53
SF3B3-213ENST00000569687 IRAK2O43187 625 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 LPXNO60711 386 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 TADA2AO75478 443 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 RASSF9O75901 435 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 LRIG2O94898 1065 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 MAP3K6O95382 1288 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 AMHP03971 560 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 ALDH2P05091 517 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 ITGB1P05556 798 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 POLBP06746 335 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 SLC2A3P11169 496 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 SELPP16109 830 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 FGFR3P22607 806 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 ALDH3A1P30838 453 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 CCR1P32246 355 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 CD68P34810 354 aaPredicted RBP5.51□□□□□ -1.53
SF3B3-213ENST00000569687 GRIK1P39086 918 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 GARSP41250 739 aaKnown RBP5.51□□□□□ -1.53
SF3B3-213ENST00000569687 GRIA1P42261 906 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 SKIV2L2P42285 1042 aaKnown RBP5.51□□□□□ -1.53
SF3B3-213ENST00000569687 LIG3P49916 1009 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 RABGGTBP53611 331 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 TNK2Q07912 1038 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 MGAT5Q09328 741 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 NIPAL4Q0D2K0 466 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 MTA1Q13330 715 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 BFSP2Q13515 415 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 GPNMBQ14956 572 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 SEPT7Q16181 437 aaKnown RBP5.51□□□□□ -1.53
SF3B3-213ENST00000569687 INSCQ1MX18 579 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 PLEKHG4Q58EX7 1191 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 SPANXN3Q5MJ09 141 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 GRTP1Q5TC63 336 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 FAXCQ5TGI0 409 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 BTBD8Q5XKL5 378 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 TRMT10BQ6PF06 316 aaKnown RBP5.51□□□□□ -1.53
SF3B3-213ENST00000569687 DENND5BQ6ZUT9 1274 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 LINC00523Q86TU6 105 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 TAC4Q86UU9 113 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 CCDC117Q8IWD4 279 aaPredicted RBP5.51□□□□□ -1.53
SF3B3-213ENST00000569687 NUP93Q8N1F7 819 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 MICALL1Q8N3F8 863 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 MPP5Q8N3R9 675 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 FITM2Q8N6M3 262 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 DNAJC5GQ8N7S2 189 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 CCNYQ8ND76 341 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 ANKK1Q8NFD2 765 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 SCAMP5Q8TAC9 235 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 GDAP1Q8TB36 358 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 RAB3IL1Q8TBN0 382 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 SH3TC2Q8TF17 1288 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 EDEM1Q92611 657 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 CDKL2Q92772 493 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 ISL2Q96A47 359 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 SLC39A13Q96H72 371 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 SPATA17Q96L03 361 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 TMEM209Q96SK2 561 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 IL12RB2Q99665 862 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 PAIP2Q9BPZ3 127 aaKnown RBP5.51□□□□□ -1.53
SF3B3-213ENST00000569687 TUBB6Q9BUF5 446 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 GBA3Q9H227 469 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 FBXO44Q9H4M3 255 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 RETREG1Q9H6L5 497 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 CATSPERBQ9H7T0 1116 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 MANSC1Q9H8J5 431 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 LRRC40Q9H9A6 602 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 MLXIPLQ9NP71 852 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 TBC1D13Q9NVG8 400 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 DONSONQ9NYP3 566 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 CLIC5Q9NZA1 410 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 BFARQ9NZS9 450 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 DCDC2Q9UHG0 476 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 ADAM28Q9UKQ2 775 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 PHTF1Q9UMS5 762 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 SLC12A4Q9UP95 1085 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 USH1CQ9Y6N9 552 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 CAPN7Q9Y6W3 813 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 DNAH12Q6ZR08 3092 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 TSC2P49815 1807 aa5.51□□□□□ -1.53
SF3B3-213ENST00000569687 SYNJ2BP-COX16A0A087WUM0 186 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 WDR27A2RRH5 827 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 DRGXA6NNA5 263 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 C2CD2LO14523 706 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 COPEO14579 308 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 SCAMP3O14828 347 aaKnown RBP5.5□□□□□ -1.53
SF3B3-213ENST00000569687 MATN3O15232 486 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 ZBTB24O43167 697 aaPredicted RBP5.5□□□□□ -1.53
SF3B3-213ENST00000569687 B4GALT3O60512 393 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 PAGE1O75459 146 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 USP1O94782 785 aa5.5□□□□□ -1.53
SF3B3-213ENST00000569687 PARNO95453 639 aaKnown RBP5.5□□□□□ -1.53
SF3B3-213ENST00000569687 EFEMP2O95967 443 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms